Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq19205 125 4e-24 seq17168 125 4e-24 seq17470 118 6e-22 seq1817 118 6e-22 seq719 118 6e-22 seq9159 113 2e-20 seq9379 111 8e-20 >seq19205 Length=121419 Score = 125 bits (138), Expect = 4e-24 Identities = 79/86 (92%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| | ||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 61684 AAAAAAGCTAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 61743 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 61744 GCTCTAACCAACTGAGCTAATGGGCC 61769 >seq17168 Length=76670 Score = 125 bits (138), Expect = 4e-24 Identities = 82/90 (91%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATT-GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 |||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||| Sbjct 69843 AATAAAAAATTTAATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 69902 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 69903 CGACGCTCTAACCAACTGAGCTAATGGGCC 69932 >seq17470 Length=16220 Score = 118 bits (130), Expect = 6e-22 Identities = 81/91 (89%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 734 AAAAAATTAG--TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 677 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 ||||| |||||||||||||||||||| |||| Sbjct 676 GCTCTAACCAACTGAGCTAATGGGCCTTCGA 646 >seq1817 Length=40271 Score = 118 bits (130), Expect = 6e-22 Identities = 78/86 (91%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| || |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 38945 AAAAAAT--AAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 39002 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 39003 GCTCTAACCAACTGAGCTAATGGGCC 39028 >seq719 Length=9503 Score = 118 bits (130), Expect = 6e-22 Identities = 78/86 (91%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| || |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 1983 AAAAAAT--AAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 1926 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 1925 GCTCTAACCAACTGAGCTAATGGGCC 1900 >seq9159 Length=59012 Score = 113 bits (124), Expect = 2e-20 Identities = 72/79 (91%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| |||||||||| ||||||||||||||||||||||||||||| || Sbjct 52724 AAAGTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAAC 52665 Query 11512 CAACTGAGCTAATGGGCCG 11530 ||||||||||||||||||| Sbjct 52664 CAACTGAGCTAATGGGCCG 52646 >seq9379 Length=14724 Score = 111 bits (122), Expect = 8e-20 Identities = 77/87 (89%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| | | ||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 13058 AAAAAA--AGACTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGAC 13115 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||| Sbjct 13116 GCTCTAACCAACTGAGCTAATGGGCCG 13142 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261407049271780