Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq19205 125 4e-24
seq17168 125 4e-24
seq17470 118 6e-22
seq1817 118 6e-22
seq719 118 6e-22
seq9159 113 2e-20
seq9379 111 8e-20
>seq19205
Length=121419
Score = 125 bits (138), Expect = 4e-24
Identities = 79/86 (92%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
|||||| | ||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 61684 AAAAAAGCTAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 61743
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| ||||||||||||||||||||
Sbjct 61744 GCTCTAACCAACTGAGCTAATGGGCC 61769
>seq17168
Length=76670
Score = 125 bits (138), Expect = 4e-24
Identities = 82/90 (91%), Gaps = 1/90 (1%)
Strand=Plus/Plus
Query 11441 AATAAAAAATCAAATT-GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499
|||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||
Sbjct 69843 AATAAAAAATTTAATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 69902
Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||| ||||||||||||||||||||
Sbjct 69903 CGACGCTCTAACCAACTGAGCTAATGGGCC 69932
>seq17470
Length=16220
Score = 118 bits (130), Expect = 6e-22
Identities = 81/91 (89%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||||||| | |||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 734 AAAAAATTAG--TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 677
Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534
||||| |||||||||||||||||||| ||||
Sbjct 676 GCTCTAACCAACTGAGCTAATGGGCCTTCGA 646
>seq1817
Length=40271
Score = 118 bits (130), Expect = 6e-22
Identities = 78/86 (91%), Gaps = 2/86 (2%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||||||| || |||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 38945 AAAAAAT--AAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 39002
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| ||||||||||||||||||||
Sbjct 39003 GCTCTAACCAACTGAGCTAATGGGCC 39028
>seq719
Length=9503
Score = 118 bits (130), Expect = 6e-22
Identities = 78/86 (91%), Gaps = 2/86 (2%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||||||| || |||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 1983 AAAAAAT--AAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 1926
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| ||||||||||||||||||||
Sbjct 1925 GCTCTAACCAACTGAGCTAATGGGCC 1900
>seq9159
Length=59012
Score = 113 bits (124), Expect = 2e-20
Identities = 72/79 (91%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
||| ||||||||| |||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 52724 AAAGTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAAC 52665
Query 11512 CAACTGAGCTAATGGGCCG 11530
|||||||||||||||||||
Sbjct 52664 CAACTGAGCTAATGGGCCG 52646
>seq9379
Length=14724
Score = 111 bits (122), Expect = 8e-20
Identities = 77/87 (89%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
|||||| | | ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 13058 AAAAAA--AGACTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGAC 13115
Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530
||||| |||||||||||||||||||||
Sbjct 13116 GCTCTAACCAACTGAGCTAATGGGCCG 13142
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261407049271780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |