Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq9911 168 6e-37 seq22504 123 2e-23 >seq9911 Length=12084 Score = 168 bits (186), Expect = 6e-37 Identities = 190/253 (75%), Gaps = 1/253 (0%) Strand=Plus/Plus Query 94756 TAACGGTTTTTTAAAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAG 94814 ||| ||| || |||| ||| || ||||||||||||||||| || ||||||| |||| Sbjct 4326 TAAGGGTCTTAACAAATATTTGCATACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAG 4385 Query 94815 ATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAA 94874 |||| ||||| | |||||||| | ||| | |||||||| ||||| ||| ||| Sbjct 4386 ATTCTTTTTGGATATTATAATCTGAAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAA 4445 Query 94875 AGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGG 94934 | || || | |||||| |||||||| |||||||||||||| | |||||||| || ||| Sbjct 4446 AAATCAAACGTTGCTGGTCTGGAGGTATACCTTCTTTGTCTTGGATTTTTGCTTTAACGT 4505 Query 94935 CGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCA 94994 | | ||||| | | || || || | || || |||||||||||||||||||| | Sbjct 4506 TTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTA 4565 Query 94995 CAAAGATCTGCAT 95007 ||||||| ||||| Sbjct 4566 CAAAGATTTGCAT 4578 Score = 140 bits (154), Expect = 3e-28 Identities = 181/248 (73%), Gaps = 4/248 (2%) Strand=Plus/Plus Query 94762 TTTTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTT 94821 |||| ||| ||| || ||||||||| |||| ||| ||||| || | ||| ||||| || Sbjct 4561 TTTTACAAAGATTTGCATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTT 4620 Query 94822 TTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATT 94879 || | ||||||||| ||| || || ||| |||| |||||| || |||| ||| Sbjct 4621 CTGAATGTTATAATCAG--ATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATT 4678 Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939 || | || ||||||||||| || ||||||||||| | || || || ||| | || Sbjct 4679 AAACGCTGTTGATCTGGAGGTATTCCTTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCG 4738 Query 94940 ACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999 | ||| |||| | || || || | || ||||| ||||| ||||||||||||||||| Sbjct 4739 ATAGTATCAGAAGGTTCCACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAA 4798 Query 95000 ATCTGCAT 95007 || ||||| Sbjct 4799 ATTTGCAT 4806 Score = 129 bits (142), Expect = 5e-25 Identities = 175/242 (72%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || |||||||||||| || || |||| ||| | ||| ||||||||||| | Sbjct 4795 AAAAATTTGCATTCCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAAT 4854 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || |||| || |||| || || ||| |||| || || || |||| || || | | Sbjct 4855 ATTGTAAT--CTGATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGT 4912 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || ||||| ||||| || ||||| ||||| | ||| ||||| || || | | || Sbjct 4913 TGTTGATCGGGAGGGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTA 4972 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 ||||| | || || |||| || || || || ||||| | |||||| ||||| |||||| Sbjct 4973 TCAGCTGGTTCCACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGC 5032 Query 95006 AT 95007 || Sbjct 5033 AT 5034 Score = 125 bits (138), Expect = 6e-24 Identities = 176/245 (72%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||||||||||||| |||||||| || | || || || || || | Sbjct 5971 AAAAATTTGCATACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAAT 6030 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || |||| | |||| || || ||| |||| || || ||| ||||||| |||| Sbjct 6031 ATTGTAAT--CAGATAGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGC 6088 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || |||||||| ||||||||||||||||| | || || || || || ||| ||| Sbjct 6089 TGTTGATCTGGGGGAATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTG 6148 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 || | | || || || | || || ||||| ||||| | ||| ||||||||||||||| Sbjct 6149 TCTGAAGGTTCCACTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGC 6208 Query 95006 ATGCT 95010 || || Sbjct 6209 ATTCT 6213 Score = 118 bits (130), Expect = 1e-21 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 ||||| || | |||||||||||||| | || ||||| | | || ||| | ||| | Sbjct 4142 ACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATC--TGAAAGAGTTCGCCCATCTT 4199 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| |||||||| ||||||| || | |||||||||||||||||||||||||| || | Sbjct 4200 CCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTATCCT 4259 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 |||||| || || ||| | | || || | | || || || | ||||| |||| Sbjct 4260 GAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTGATAGTTT 4319 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | |||||||| || || ||||| || ||||| Sbjct 4320 TCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| || || | |||||| || | ||||||||||||||| | ||||| || | Sbjct 5756 CCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCAGAC 5815 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | ||| |||| || || || | |||||||| | ||| || ||||| || Sbjct 5816 AATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGG 5875 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | ||||||||| || ||| | | || || | | || || Sbjct 5876 ATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACT 5935 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || |||||||||||||| | ||||||||||| || ||||| Sbjct 5936 TCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982 Score = 111 bits (122), Expect = 1e-19 Identities = 171/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || || |||||||| || || || || | |||||||||||||| | Sbjct 5023 AAAAATCTGCATACCACCCCTCAATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGAT 5082 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||||||||| | | || || || ||| || | ||||| || | || |||| || | Sbjct 5083 GTTATAATC--TGAAAGGGTACGACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGT 5140 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || ||||| || |||||||||||||| || | || || || || || | | || Sbjct 5141 TGTTGATCAGGTGGAATACCTTCTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTA 5200 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| | || || || | |||||||| |||||||| | |||||| ||||| || ||| Sbjct 5201 TCAGATGGTTCAACTTCTAAAGTGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGC 5260 Query 95006 AT 95007 || Sbjct 5261 AT 5262 Score = 104 bits (114), Expect = 2e-17 Identities = 167/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || ||||||||||| || ||||| || | || || || ||||| | Sbjct 5251 AAAAATTTGCATACCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGAT 5310 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||||||||| | ||| ||| |||| ||||| || ||||||| || | ||| Sbjct 5311 GTTATAATCAGAAAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTG 5370 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || ||||| || ||||||||||| || | ||||||||| || || | | ||| || Sbjct 5371 TTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATC 5430 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || | || || || || ||||| | || || || || |||||||| Sbjct 5431 AGATGGCTCCACTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| || || | |||||| || | ||||||||||||||| | || || || | Sbjct 5492 CCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGAC 5551 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | ||| |||| || || || | |||||||| | ||| || ||||| || Sbjct 5552 AATGTACGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGG 5611 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | ||||||||| || ||| | | || || | | || || Sbjct 5612 ATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACT 5671 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || |||||||||||||| | ||||| ||||| || ||||| Sbjct 5672 TCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718 >seq22504 Length=90246 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || ||||| |||||||||||||||||||| |||||||| || | ||||||| | Sbjct 25758 CCACCCCTCAAACGCAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAAT--CCG 25701 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 |||| || || || |||| |||||| || | || || | | ||||||||| || | Sbjct 25700 ATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTG 25641 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | |||||||| ||||| | |||||| ||||| || ||| || || | | || | Sbjct 25640 GGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAA 25581 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || || ||||| || ||||| |||||||| || || ||||| Sbjct 25580 CCTCGAGGGTTATTGTTTTCCCTGTAAGTGTTTTCACGAAAATTTGCAT 25532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448143235885800