Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq6645 150 4e-32 seq1817 140 6e-29 seq14406 100 6e-17 seq1260 96.9 7e-16 seq16741 95.1 2e-15 seq9045 95.1 2e-15 seq23091 84.2 4e-12 seq871 80.6 5e-11 >seq6645 Length=12985 Score = 150 bits (166), Expect = 4e-32 Identities = 215/302 (71%), Gaps = 3/302 (1%) Strand=Plus/Plus Query 7925 GGTAAAGGTTTGTTCAACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGT 7984 |||| |||| | | || || | |||||||| | || | || | || || ||||| Sbjct 7608 GGTAGAGGTCTAGTAAATAACCTCATCAACAAATTACCTGTAGAGTTACATATTCCAGGG 7667 Query 7985 TATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGT 8044 ||||||||||| || || ||||| || ||| ||| | || | || || ||| | || Sbjct 7668 TATCAGTACTGTGGGCCAGGTACGAAATTAAAAAAGCGGTTGGAGCGGGGAGATCCGGGC 7727 Query 8045 ATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTTACTCAAAAAATCGTGAA 8104 || |||| | ||||| || ||||| |||||||||||||| ||| | |||| || Sbjct 7728 ATCAATCAACTTGACGCAGCTTGTAAAGAACACGATATAGCATACGCCCAAAA---CAAA 7784 Query 8105 AATTTGGAAGCTCGTCACGAGGCTGATAAAATTCTTGCTGAGAAAGCGTGGCAACGATTT 8164 |||||||| | | |||||||| || ||||||||| || ||||| ||| |||| || Sbjct 7785 GATTTGGAACATAGACACGAGGCGGACAAAATTCTTCAAGAAAAAGCTTGGTCACGAGTT 7844 Query 8165 CAAGCGAGAGACGCTGCTATTGGTGAAAAAGCTGCTGCTTGGAGTGTAAATAAAATCATG 8224 |||| || ||||| ||| || ||||| ||||||| |||| ||| | ||| || ||| Sbjct 7845 AAAGCCAGCGACGCGAATATAGGCGAAAAGACTGCTGCGTGGACTGTCACTAATATTATG 7904 Query 8225 AA 8226 || Sbjct 7905 AA 7906 Score = 149 bits (164), Expect = 1e-31 Identities = 371/551 (67%), Gaps = 17/551 (3%) Strand=Plus/Plus Query 7171 TTCCGATACCTACCACTCTTCAAT-TCACTGTCTTTATCTATTACCACAAATCCATATTT 7229 |||| ||| || || || ||||| || || ||||| || || || | |||||||||||| Sbjct 6833 TTCCTATATCTTCC-CTTATCAATATCTCTATCTTTGTCGATGACTAGAAATCCATATTT 6891 Query 7230 AT---TCCAACATGCCGAGCATAAATCTCTGAATGAGTTGTATGGCATGTCCGTATTGAC 7286 | |||| || | || || | | |||| | | | | ||| || || || Sbjct 6892 GTCTTTCCAGCACTCTGAACACATTAATTTGAACTGCTGGAAGGACATATCTGTTCCAAC 6951 Query 7287 ATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAGTT 7346 |||||||| || | ||| || | ||||| || ||||| ||| || | | ||||| Sbjct 6952 GTGATCATCGTATACATGTTTTAAGTTCATATCGTCTTGCTTGAATAGTATTAATAAGTT 7011 Query 7347 TGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAGCT 7406 ||||| | | || ||||| || || || || || || ||||| | ||| ||||| Sbjct 7012 ACTGTTATCGCGTACGAGTTGCTTTGGAATGCGGGTGTAGGTCTGACATAAATAAAAGCT 7071 Query 7407 GTCAACATCCTTGTGTCGACCCATGCAGAAAA--AAGCTTTGATGTGATCCTGTTTTTCA 7464 || || | ||||| || ||||| |||||| || | | || | ||| || ||||| Sbjct 7072 ATCTACTGCTTTGTGACGGCCCAT--AGAAAAGTAAAGTCTAATTTTATCTTGCTTTTCG 7129 Query 7465 CAAGCAACATCGTCAAATATCATCAAGGAGTTAGGCTTAGCATCTTCAGGCTTGATTACA 7524 || || |||||||||||||| |||| || ||| || | ||||| || | || Sbjct 7130 CACGCTACATCGTCAAATATAATCACAGAATTATTTTTTACCTCTTCGGGACCCACGACG 7189 Query 7525 GCTTCATGTTCGC-TGAATGTGAAGAATCCAATA--CCATCAATCTGTTTAAGCAGTGTC 7581 |||| ||| || |||| | | ||| | || || || | ||| | | | Sbjct 7190 TCTTC--GTTTGCATGAA-AAGCATAATACTCTACGCCCGTAACCCTTTTCATAACCTTG 7246 Query 7582 TCCAGGAACTGATACTTTGGTTGGTTAAGAGACTTTGAGTAAAGATATATATTCTCAAAC 7641 |||| ||||||||||||||||| | |||||||| ||||| | ||| | ||| ||||| Sbjct 7247 TCCAAAAACTGATACTTTGGTTGATATAGAGACTTCGAGTACACATACAAATTGTCAAAT 7306 Query 7642 CTCAAACCGTTTGGATGTA-CAATAAGAGACAGCAGAGCATTCGTCTTTCCACAGTTTGA 7700 || | || ||| || | ||||| || |||| | |||| ||||||||||||||||| Sbjct 7307 CTGAGTCCATTTTCATCAATTAATAA-TGAAAGCATAACATTTGTCTTTCCACAGTTTGA 7365 Query 7701 TGGCCCGCAAA 7711 ||| || |||| Sbjct 7366 TGGTCCACAAA 7376 Score = 104 bits (114), Expect = 5e-18 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 6158 TTTAATATATAACTCCAGCCTCCCTAAGCTCTTCAATAATTGACATGATTTCATTCGTGT 6217 |||||| |||||| || ||||| || || ||||| | || || |||||||| || | Sbjct 4344 TTTAATCTATAACGCCCGCCTCTCTCAGTTCTTCCAATATAGATATGATTTCGTTTTCAT 4403 Query 6218 GACTTGGGTTTCCAGCAGCTTGAGATGCCATCAGTAGTCGCAAACGATCAACTAGCTCAT 6277 |||| |||||||||| ||| ||||||| |||||| || | || ||||||||||||| Sbjct 4404 GACTATTATTTCCAGCAGTTTGTGATGCCACCAGTAGACGAAGCCGGTCAACTAGCTCAT 4463 Query 6278 TTGGATCATCCCAGTAAACATA 6299 | || |||||| || ||||| Sbjct 4464 TGACATTATCCCAATACACATA 4485 >seq1817 Length=40271 Score = 140 bits (154), Expect = 6e-29 Identities = 155/205 (76%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 4501 AATTTGAAACAATGTTTAGATTTAGGTTTAGTTCTTAAGAAAATACACCTAGTCTTGAAA 4560 |||||| | ||| |||||| |||||| || | | |||||||||||| ||||| ||| Sbjct 23927 AATTTGCAGCAAGCTTTAGAAAACGGTTTAATTTTAACGAAAATACACCTCGTCTTAAAA 23868 Query 4561 TTTGAGCAATCAGACTGGCTCAAATCATATATCGATAAAAATACCGCATGCCGAAAACTA 4620 ||| ||||||| | ||||| ||||| || || || |||||| || ||| ||| Sbjct 23867 TTTAAGCAATCTGCTTGGCTGAAATCGTACATTGACTTAAATACAAAATTTAGAA--CTA 23810 Query 4621 GC--TAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAA 4678 || | ||||| ||||| |||||| | | |||||||||||||||||| || | ||||| Sbjct 23809 GCACTTCTAATGATTTCGAGAAAAACCTGTTTAAATTAATGAATAATGCCGTATCTGGAA 23750 Query 4679 AGACGATGGAGAATGTACGAAAATA 4703 | |||||||||||| | ||||| || Sbjct 23749 AAACGATGGAGAATATCCGAAAGTA 23725 Score = 131 bits (144), Expect = 3e-26 Identities = 153/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 4501 AATTTGAAACAATGTTTAGATTTAGGTTTAGTTCTTAAGAAAATACACCTAGTCTTGAAA 4560 |||||| | ||| |||||| |||||| || | | |||||| ||||| ||||| ||| Sbjct 25746 AATTTGCAGCAAGCTTTAGAAAACGGTTTAATTTTAACGAAAATGCACCTCGTCTTAAAA 25687 Query 4561 TTTGAGCAATCAGACTGGCTCAAATCATATATCGATAAAAATACCGCATGCCGAAAACTA 4620 ||| ||||| | | ||||| ||||| || || || |||||| || ||| ||| Sbjct 25686 TTTAAGCAACCTGCTTGGCTGAAATCGTACATTGACTTAAATACAAAATTTAGAA--CTA 25629 Query 4621 GC--TAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAA 4678 || | ||||| ||||| |||||| | | |||||||||||||||||| || | ||||| Sbjct 25628 GCACTTCTAATGATTTCGAGAAAAACCTGTTTAAATTAATGAATAATGCCGTATCTGGAA 25569 Query 4679 AGACGATGGAGAATGTACGAAAATA 4703 | |||||||||||| | ||||| || Sbjct 25568 AAACGATGGAGAATATCCGAAAGTA 25544 >seq14406 Length=24138 Score = 100 bits (110), Expect = 6e-17 Identities = 205/303 (68%), Gaps = 4/303 (1%) Strand=Plus/Minus Query 7934 TTGTTCAACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGTTATCAGTAC 7993 ||||| ||| | | || || ||| | ||| |||| | || ||||||| ||||| ||| Sbjct 16291 TTGTT-AACTCTCTGATTAATAAGTTACCAGTTGAGTTACATTTACCAGGATATCAATAC 16233 Query 7994 TGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGTATAAATCCT 8053 ||||| || ||||| || || ||| | | | || || ||| |||| ||||||| Sbjct 16232 TGCGGACCTGGTACGAATTTGAAGAAGCGTCTTGAACGTGGCGATGCAGGAGTAAATCCC 16173 Query 8054 TTGGACGCTGCGTGTAAGGAACACGATATAGCTTACTCAAAAAATCGTGAAAATTTGGAA 8113 || ||| || || || || |||||||| || || || | | ||||| || | || Sbjct 16172 TTAGACCGCGCCTGCAAAGACCACGATATCGCATATTCGCAGA---GTGAAGATCTACAA 16116 Query 8114 GCTCGTCACGAGGCTGATAAAATTCTTGCTGAGAAAGCGTGGCAACGATTTCAAGCGAGA 8173 | ||||| || ||| | ||| || ||||||| |||| | ||| ||||| Sbjct 16115 AGCAGACACGAAGCAGATCGTGTACTTCAAGAACGAGCGTGGGAACGTGTCCAATCGAGA 16056 Query 8174 GACGCTGCTATTGGTGAAAAAGCTGCTGCTTGGAGTGTAAATAAAATCATGAAGTTAAAA 8233 ||||| | |||| ||||||||||| ||||||| || ||| | ||||| |||| Sbjct 16055 GACGCCAGTTTTGGAGAAAAAGCTGCGGCTTGGACAGTCGCTAATACAATGAAAGCAAAA 15996 Query 8234 AGA 8236 ||| Sbjct 15995 AGA 15993 >seq1260 Length=11478 Score = 96.9 bits (106), Expect = 7e-16 Identities = 200/297 (67%), Gaps = 3/297 (1%) Strand=Plus/Minus Query 7930 AGGTTTGTTCAACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGTTATCA 7989 |||| || | || || | ||||| ||| | || | || | || || | || ||||| Sbjct 6167 AGGTCTGATGAATGATCTCATCAATAAGTTACCTGTAGAGTTACATATTCTGGGATATCA 6108 Query 7990 GTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGTATAAA 8049 ||||| || || ||||| || ||| | | |||| | || | || ||||||| || Sbjct 6107 ATACTGTGGACCTGGTACGAAATTAAAAACGCGATTCACGCGCGTAGACCCAGGTATCAA 6048 Query 8050 TCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTTACTCAAAAAATCGTGAAAATTT 8109 || | ||||| || ||||| || ||||||| ||| ||||| || | || |||| Sbjct 6047 TCAACTCGACGCAGCTTGTAAAGACCACGATACAGCATACTCCCAACACA---AAGATTT 5991 Query 8110 GGAAGCTCGTCACGAGGCTGATAAAATTCTTGCTGAGAAAGCGTGGCAACGATTTCAAGC 8169 | || | | ||||||||||| ||| | || || ||||| ||| ||| || | || Sbjct 5990 GAAACATAGACACGAGGCTGACAAAGTACTCCAAGAAAAAGCTTGGTCACGGGTTAAGGC 5931 Query 8170 GAGAGACGCTGCTATTGGTGAAAAAGCTGCTGCTTGGAGTGTAAATAAAATCATGAA 8226 || ||||| ||| || ||||| | ||||| |||| ||| | || || ||||| Sbjct 5930 TAGCGACGCGAGTATAGGCGAAAAGACAGCTGCGTGGACTGTTACCAATATTATGAA 5874 >seq16741 Length=15519 Score = 95.1 bits (104), Expect = 2e-15 Identities = 204/303 (67%), Gaps = 4/303 (1%) Strand=Plus/Plus Query 7934 TTGTTCAACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGTTATCAGTAC 7993 ||||| ||| | | || || ||| | ||| |||| | || ||||||| ||||| ||| Sbjct 1870 TTGTT-AACTCTCTGATTAATAAGTTACCAGTTGAGTTACATTTACCAGGATATCAATAC 1928 Query 7994 TGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGTATAAATCCT 8053 ||||| || ||||| || || ||| | | | || || || |||| ||||||| Sbjct 1929 TGCGGACCTGGTACGAATTTGAAGAAGCGTCTTGAACGTGGCGACGCAGGAGTAAATCCC 1988 Query 8054 TTGGACGCTGCGTGTAAGGAACACGATATAGCTTACTCAAAAAATCGTGAAAATTTGGAA 8113 || ||| || || || || |||||||| || || || | | ||||| || | || Sbjct 1989 TTAGACCGCGCCTGCAAAGACCACGATATCGCATATTCGCAGA---GTGAAGATCTACAA 2045 Query 8114 GCTCGTCACGAGGCTGATAAAATTCTTGCTGAGAAAGCGTGGCAACGATTTCAAGCGAGA 8173 | ||||| || ||| | ||| || ||||||| |||| | ||| ||||| Sbjct 2046 AGCAGACACGAAGCAGATCGTGTACTTCAAGAACGAGCGTGGGAACGTGTCCAATCGAGA 2105 Query 8174 GACGCTGCTATTGGTGAAAAAGCTGCTGCTTGGAGTGTAAATAAAATCATGAAGTTAAAA 8233 ||||| | |||| ||||||||||| ||||||| || ||| | ||||| |||| Sbjct 2106 GACGCCAGTTTTGGAGAAAAAGCTGCGGCTTGGACAGTCGCTAATACAATGAAAGCAAAA 2165 Query 8234 AGA 8236 ||| Sbjct 2166 AGA 2168 Score = 95.1 bits (104), Expect = 2e-15 Identities = 204/303 (67%), Gaps = 4/303 (1%) Strand=Plus/Plus Query 7934 TTGTTCAACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGTTATCAGTAC 7993 ||||| ||| | | || || ||| | ||| |||| | || ||||||| ||||| ||| Sbjct 5706 TTGTT-AACTCTCTGATTAATAAGTTACCAGTTGAGTTACATTTACCAGGATATCAATAC 5764 Query 7994 TGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGTATAAATCCT 8053 ||||| || ||||| || || ||| | | | || || || |||| ||||||| Sbjct 5765 TGCGGACCTGGTACGAATTTGAAGAAGCGTCTTGAACGTGGCGACGCAGGAGTAAATCCC 5824 Query 8054 TTGGACGCTGCGTGTAAGGAACACGATATAGCTTACTCAAAAAATCGTGAAAATTTGGAA 8113 || ||| || || || || |||||||| || || || | | ||||| || | || Sbjct 5825 TTAGACCGCGCCTGCAAAGACCACGATATCGCATATTCGCAGA---GTGAAGATCTACAA 5881 Query 8114 GCTCGTCACGAGGCTGATAAAATTCTTGCTGAGAAAGCGTGGCAACGATTTCAAGCGAGA 8173 | ||||| || ||| | ||| || ||||||| |||| | ||| ||||| Sbjct 5882 AGCAGACACGAAGCAGATCGTGTACTTCAAGAACGAGCGTGGGAACGTGTCCAATCGAGA 5941 Query 8174 GACGCTGCTATTGGTGAAAAAGCTGCTGCTTGGAGTGTAAATAAAATCATGAAGTTAAAA 8233 ||||| | |||| ||||||||||| ||||||| || ||| | ||||| |||| Sbjct 5942 GACGCCAGTTTTGGAGAAAAAGCTGCGGCTTGGACAGTCGCTAATACAATGAAAGCAAAA 6001 Query 8234 AGA 8236 ||| Sbjct 6002 AGA 6004 >seq9045 Length=125901 Score = 95.1 bits (104), Expect = 2e-15 Identities = 204/303 (67%), Gaps = 4/303 (1%) Strand=Plus/Minus Query 7934 TTGTTCAACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGTTATCAGTAC 7993 ||||| ||| | | || || ||| | ||| |||| | || ||||||| ||||| ||| Sbjct 22053 TTGTT-AACTCTCTGATTAATAAGTTACCAGTTGAGTTACATTTACCAGGATATCAATAC 21995 Query 7994 TGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGTATAAATCCT 8053 ||||| || ||||| || || ||| | | | || || || |||| ||||||| Sbjct 21994 TGCGGACCTGGTACGAATTTGAAGAAGCGTCTTGAACGTGGCGACGCAGGAGTAAATCCC 21935 Query 8054 TTGGACGCTGCGTGTAAGGAACACGATATAGCTTACTCAAAAAATCGTGAAAATTTGGAA 8113 || ||| || || || || |||||||| || || || | | ||||| || | || Sbjct 21934 TTAGACCGCGCCTGCAAAGACCACGATATCGCATATTCGCAGA---GTGAAGATCTACAA 21878 Query 8114 GCTCGTCACGAGGCTGATAAAATTCTTGCTGAGAAAGCGTGGCAACGATTTCAAGCGAGA 8173 | ||||| || ||| | ||| || ||||||| |||| | ||| ||||| Sbjct 21877 AGCAGACACGAAGCAGATCGTGTACTTCAAGAACGAGCGTGGGAACGTGTCCAATCGAGA 21818 Query 8174 GACGCTGCTATTGGTGAAAAAGCTGCTGCTTGGAGTGTAAATAAAATCATGAAGTTAAAA 8233 ||||| | |||| ||||||||||| ||||||| || ||| | ||||| |||| Sbjct 21817 GACGCCAGTTTTGGAGAAAAAGCTGCGGCTTGGACAGTCGCTAATACAATGAAAGCAAAA 21758 Query 8234 AGA 8236 ||| Sbjct 21757 AGA 21755 >seq23091 Length=10431 Score = 84.2 bits (92), Expect = 4e-12 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 6156 CTTTTAATATATAACTCCAGCCTCCCTAAGCTCTTCAATAATTGACATGATTTCATTCGT 6215 || ||| | | |||| || || || || || ||||| | || ||||||||||| | Sbjct 1440 CTGTTACTCTGTAACACCTGCTTCTCTCAGTTCTTCCAATATAGACATGATTTCGGTTTC 1381 Query 6216 GTGACTTGGGTTTCCAGCAGCTTGAGATGCCATCAGTAGTCGCAAACGATCAACTAGCTC 6275 ||||| ||||| |||| ||| ||||||| |||||| || | |||||||||||||| Sbjct 1380 ATGACTATTATTTCCTGCAGTTTGGGATGCCACCAGTAGACGAAGTCGATCAACTAGCTC 1321 Query 6276 ATTTGGATCATCCCAGTAAACATA 6299 |||| | |||||| || || || Sbjct 1320 ATTTACGTTATCCCAATACACGTA 1297 >seq871 Length=40747 Score = 80.6 bits (88), Expect = 5e-11 Identities = 100/136 (74%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 4559 AATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAAAAATACCGCATGCCGAAAAC 4618 ||||| |||||| || || ||||||||||||||| |||||| | ||| ||| Sbjct 18877 AATTTCGGCAATCTTCTTGACTTAAATCATATATCGATTTAAATACGACCCTCCGCTAAC 18936 Query 4619 TAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAA 4678 ||| || ||||| || | |||| | |||| ||| || ||||| ||| | || | |||| Sbjct 18937 AAGCAAAAAATGATTTTG-AAAAGATTTTTTTAAGTTGATGAACAATTCCGTATACGGAA 18995 Query 4679 AGACGATGGAGAATGT 4694 | |||||||| ||||| Sbjct 18996 AAACGATGGAAAATGT 19011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97943679208370