Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1220 322 6e-83 seq9764 163 4e-35 >seq1220 Length=9943 Score = 322 bits (356), Expect = 6e-83 Identities = 618/904 (68%), Gaps = 13/904 (1%) Strand=Plus/Plus Query 33002 TAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCA 33061 |||| || | |||||||||||| || || |||||| ||||| |||||||| || ||| Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216 Query 33062 ATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCA 33121 ||||| | | ||| |||||||| |||||| | |||||||| ||||| | | || | Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276 Query 33122 ATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCA 33181 ||| | ||||| || ||||| ||||| ||||| |||| || || |||| Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336 Query 33182 TTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCAT 33241 ||||||| | |||| || | || | |||||||| ||||| || || ||||| | Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396 Query 33242 CTGTTATAATAGATCTAACGGTTTC---TTCACTCGGTGGATG--CAATAAATGTTTAAA 33296 | |||||| || | || || || |||| || ||||| | | ||| Sbjct 7397 CGCAAATAATA--TCGA-CGATTCGAGATTTCGACGGTTTTTGTACAATATAAGA--AAA 7451 Query 33297 CATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAA 33356 | || || || || || | |||| || || || | |||| ||| ||||| || Sbjct 7452 TAATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAA 7511 Query 33357 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGA 33416 || || || ||||| || || | |||||| | |||||| || ||||| || ||| || Sbjct 7512 AGTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGA 7571 Query 33417 AAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGCTGT 33475 ||||| |||||||| |||||||| || || | | | ||| || | || | || | Sbjct 7572 GAAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTT 7631 Query 33476 CATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33533 || ||||| | | ||||| | || || || ||| ||||| | |||||||| Sbjct 7632 ACTGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTAT 7691 Query 33534 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33593 ||||| || | | | | ||| || || || | | ||| || || || | | || Sbjct 7692 CGCATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCT 7751 Query 33594 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33653 |||||||| |||||| || ||||| || || ||||| ||||| ||||| | || || Sbjct 7752 GTACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTC 7811 Query 33654 GGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACT 33713 || | || || ||| || ||| |||||| ||| ||||||||| || ||||| || Sbjct 7812 AGTTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGA 7871 Query 33714 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT 33773 || || ||||| ||||| || | ||| ||||||| | | ||||| |||| |||||| Sbjct 7872 TGCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATT 7931 Query 33774 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33833 ||||| || |||||| |||||| |||||||||||| ||||||||| || || || || Sbjct 7932 CCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGC 7991 Query 33834 CTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGG 33893 | ||| || | ||| || || ||||| |||||||||| |||||||| || || Sbjct 7992 TTGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGG 8051 Query 33894 ATTT 33897 |||| Sbjct 8052 ATTT 8055 >seq9764 Length=88291 Score = 163 bits (180), Expect = 4e-35 Identities = 351/524 (67%), Gaps = 3/524 (1%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 |||||||| || || | || |||||||| | |||||| ||||||||||| || | | Sbjct 27309 GTGAATTGTATAGGCTTTGCGGCTGGTTTCGTTCTTAGATAATACATTCCCGTCTTCAAA 27368 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || |||| ||||| ||||| || || || | ||||| || | | | Sbjct 27369 CCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACG 27428 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || | ||||| || ||||| ||||||||||| || || | || || || || || Sbjct 27429 TGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATA 27488 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 || ||| | | |||||||| | ||||| || | ||| ||||| || || | Sbjct 27489 ATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATT 27548 Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 | ||||||| || || |||| || || | ||| |||||| || || || | | Sbjct 27549 CCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCC 27608 Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351 || | | ||| ||||| | | | | | ||||| ||||||| || || ||||||||| Sbjct 27609 CAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGATTAACGACCTGGAATTCTCCA 27668 Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411 ||||| || | | ||||| || || || |||||||| | || || |||||||| Sbjct 27669 GACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCT 27728 Query 62412 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62471 || |||||||| || || || |||||||||||||| | | |||| |||||| | ||| Sbjct 27729 AAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCA 27788 Query 62472 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 62515 | | | ||| || |||||| | ||||| ||| ||||| Sbjct 27789 TGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGATC 27832 Score = 152 bits (168), Expect = 6e-32 Identities = 348/523 (67%), Gaps = 3/523 (1%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 |||||||| || || | || |||||||| | ||| || ||||||||||| || | | Sbjct 24173 GTGAATTGTATAGGTTTTGCGGCTGGTTTCGTCCTTAGGTAATACATTCCCGTCTTCAAA 24232 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || |||| ||||| ||||| || || || | ||||| || | | | Sbjct 24233 CCTTTCTTCCACCCGTAGAAATGGATCGATGTAAGAACGCCGTAACTAGGCTTCTCGACG 24292 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || | ||||| || ||||| ||||||||||| || || | || || || || || Sbjct 24293 TGTAGATTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATA 24352 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 || ||| | | |||||||| | ||||| || | ||| ||||| || || | Sbjct 24353 ATAACCTTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATT 24412 Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 | ||||||| || || |||| || || | ||| |||||| || || || | | Sbjct 24413 CCCGGAATATTCTGTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCC 24472 Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351 || | | ||| ||||| | | | | | ||||| | ||||| || || ||||||||| Sbjct 24473 CAGAGATCTCTATCGGTAAGATCGCGCAACAGATGGTGGTTAACGACCTGGAATTCTCCA 24532 Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411 ||||| || | | ||||| || || || |||||||| | || || |||||||| Sbjct 24533 GACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCT 24592 Query 62412 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62471 || |||||||| || || || |||||||||||||| | | |||| |||||| | ||| Sbjct 24593 AAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCA 24652 Query 62472 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGAT 62514 | | | ||| || |||||| | ||||| ||| |||| Sbjct 24653 TGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCCCATAGAT 24695 Score = 143 bits (158), Expect = 3e-29 Identities = 321/473 (68%), Gaps = 18/473 (4%) Strand=Plus/Plus Query 62586 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 62645 || ||||||||| ||| || | ||||||||| ||||| || || | ||||| | || Sbjct 25022 TACGGTCCTTCCACCTCGGCCAATTCACAACTAGCCTCCAAAGCGGCATAATACAACGTC 25081 Query 62646 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGA 62705 ||||| |||| | |||| | |||||| ||||||| | || | || | | Sbjct 25082 TCGAAAATCTGCAAGTTTAACATGCGAGCTTCCTCGCTATCATACGGCATTCTCAACAAA 25141 Query 62706 ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62765 ||||| || || || | || || | || |||||||| |||||||||||| |||| || Sbjct 25142 ATAAAAGCATCGGCAAGGCCCTGTATTCCGATACCGATCGGTCTATGTCTCATATTCGAC 25201 Query 62766 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TG 62822 ||| ||| || || |||||||| ||||| ||||| || || || | || | || Sbjct 25202 GTTTTGCTTTCGGGTATCGGATAATAGTTAATGTCTATGATCTTGTTCAAGTTGCGCGTG 25261 Query 62823 ACAATTACTTTGACCACATCCTTC-AGTTTGAGAAAATC--AAATC-GCCCATC---TAT 62875 || || ||| || | |||| ||||| | ||||| | || || ||| | | Sbjct 25262 ACGAT---TTTCGTGACGTTCTTCAAGTTTTCG-AAATCGTACGTCTTCCTATCCGGTTT 25317 Query 62876 TACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTC--ATTAGCATCC 62933 ||| ||||| |||| ||||| || || ||||||||||| || | || || | | | Sbjct 25318 TACGAACATATTCACGGCAATCGACGCTAGATTACAAACTGCAATTTCGTCTTTGGA--C 25375 Query 62934 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGA 62993 | ||| | || ||||| ||||| | || |||| ||||| ||||| | || ||||| Sbjct 25376 GTATACTCTACGATCTCGGTGCATAAGTTGCTACTTTTGATCGTTCCCAGGTTCTGTTGG 25435 Query 62994 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 63046 || || || || || || ||||| || || ||| | || ||||| ||||| Sbjct 25436 TTGCTTTTACGATTGCAAGCGTCCTTGTAGAGCATGTAAGGGGTACCGGTTTC 25488 Score = 138 bits (152), Expect = 1e-27 Identities = 409/627 (65%), Gaps = 8/627 (1%) Strand=Plus/Plus Query 63216 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63275 || ||||||||||| | || || |||||||| || ||| | ||| || | | | Sbjct 25819 ACGCGTTTCATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGCGCT 25878 Query 63276 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63335 || ||| | || |||||||| || | || | ||| ||| ||||| | ||||| || Sbjct 25879 TCTTCGATGCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAGGGC 25938 Query 63336 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63395 |||||||| ||||| | | |||| |||| |||||||| || ||||| | ||| | || Sbjct 25939 TCCAAGTAAATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTTGATCAACGTAACGCGCC 25998 Query 63396 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63455 || ||||| |||| || | ||| || | | |||||| |||| || || || |||| Sbjct 25999 GTATTATTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCGGCA 26058 Query 63456 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63515 ||||| |||| | || | ||||| | || || || || || || || Sbjct 26059 ATATAAGTTCCTTTCGCTCTTATATTGTGCACGTTTACGCCGATACCGCCGGCTGACTTC 26118 Query 63516 GAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATACCCTCTATGCTATCATCGATCAT 63574 || || | |||||| | || | || | | || ||||| || || ||| ||| Sbjct 26119 GAAATGTAGGCGCATTGCGCCAAGCAGGTGA-AAATCCCCTCGATCGAGTCTTCGGGCAT 26177 Query 63575 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---AGTTCCCGCATTAAATAAGGT 63631 | | || || || ||| | | ||| | | || |||| || | || Sbjct 26178 CATCAAGAGGAAGCATGAAGAAA---GCTGAGGTTTTGGTGTAGCCGCCGAGAACAGAGT 26234 Query 63632 AGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTC 63691 ||| |||||||||||| || | || || || |||||| || || ||| | | || Sbjct 26235 CGGACTAGCGTGCGTAAAATATCTCTCCGATAGGTAATTGTAGGTTTCGATAACGGCATC 26294 Query 63692 TATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63751 ||||| || ||||| || || || ||||| | ||| || ||||| ||||| || Sbjct 26295 GATATCTTCGCCGTGGATTCCAACAGCTACCCGCATCAGCATATGTTGAGGCCTTTCGAC 26354 Query 63752 GATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 63811 |||||| || || || | || ||| | || || |||||||| || || || || Sbjct 26355 GATCTTACCATTAATGCGTAAGAGATACGATCTCTCTAAGGTTTTAAAGCCGAAGTAATT 26414 Query 63812 GTATGAAAAGTCTCGTTCGTAAATAAT 63838 ||| |||||||| | ||||||||||| Sbjct 26415 GTAGGAAAAGTCCCTGTCGTAAATAAT 26441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622741588489800