Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq22639 170 5e-37
seq9764 145 2e-29
seq1220 127 5e-24
>seq22639
Length=125898
Score = 170 bits (188), Expect = 5e-37
Identities = 348/506 (69%), Gaps = 12/506 (2%)
Strand=Plus/Minus
Query 111327 ACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGA 111386
|| |||||||| || |||| || | || || ||| | || ||||| ||| |||
Sbjct 12998 ACTACAAAGCGTGTATTCTGGAGAGGCGTCGTTGAGGAATTACTATGGTTCATTAAGGGA 12939
Query 111387 AGTACAAATGCAAATGAACTTGCAGCAAAAA--ATGTAAAAATTTGGGATGGAAATGGAT 111444
|| || || ||| || | || ||| |||| | || || || ||| | | |||| |
Sbjct 12938 AGCACTAACGCACAT--ATTTTGAGCGAAAAGAACGTCAATATATGGAAAGCAAATAGTA 12881
Query 111445 CACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAG 111504
| ||||| || ||||||| |||||| | |||| | |||||||||||||| ||||||
Sbjct 12880 CTCGTGATTTCTTAGATTCTGTTGGTTTAATCGATAGAGAAGAAGGTGATCTAGGACCAA 12821
Query 111505 TTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCACGACTCATATG 111564
||||||| |||||||||||||| | ||| || || || | || ||||| | | |||
Sbjct 12820 TTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTATACAAATATGCATGCCGATTAT- 12762
Query 111565 ATTCACA-GGGAACTGATCAATTACAGAATGTCATTGATCAAATTAAGAA-CAACCCAAC 111622
| | | | ||| | ||||| || | | || || || ||| | ||| | ||| |
Sbjct 12761 ACTAATAGGGGGATAGATCAGTTGATGGAAGTGATAAATACAATAAGGAATCGACCGCA- 12703
Query 111623 TTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAAAAAATGGCACTTCC 111682
| | | ||||| |||||| |||||||||| ||| || | |||||||| |||||
Sbjct 12702 TGATAGACGCATCATTATGTGTGCATGGAATCCAGTTGATATACCTAAAATGGCTCTTCC 12643
Query 111683 ACCATGTCATCTTATGTGCCAGTTTTATGTACACGA--CGGGATGCTTTCATGCCAAATG 111740
||| || ||| || || |||| ||| ||| || | | || |||| |
Sbjct 12642 ACCTTGCCATTGCTTGGTACAATTTTTTGT-TGCGAATAACGA-GTTATCTTGCCTTTTA 12585
Query 111741 TATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTA 111800
||||| ||||||| ||||| |||||||| || ||||||||||||||||| || || ||
Sbjct 12584 TATCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTTTAATATTGCAAGCTATGCCTTA 12525
Query 111801 CTTACTTGCTTAATCGCTCATTTTAC 111826
| || | | | |||||||| ||||
Sbjct 12524 TTAACCTACATGATCGCTCACATTAC 12499
>seq9764
Length=88291
Score = 145 bits (160), Expect = 2e-29
Identities = 277/408 (68%), Gaps = 0/408 (0%)
Strand=Plus/Minus
Query 364749 AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACC 364808
||| || ||||| || ||||| || || || ||| | ||||| ||||| | ||| |||||
Sbjct 27764 AGCACCTATGCCGACAGCTTCGACGGCTCAAATCTTAGGAAATAACGAATCCTTTGAACC 27705
Query 364809 GTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAA 364868
|| || || | || | | || || | || |||||||| | ||| |||||| |
Sbjct 27704 GTACACTTCGAACATCTACACCAGACGCGTCTTGTCTGGAGAATTCCAGGTCGTTAATCA 27645
Query 364869 GTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATAT 364928
| || | |||||| |||| | | || |||| ||| ||||||||| | ||
Sbjct 27644 CCATCTGTTGCGCGATCTTACCGATAGAGATCTCTGGGACGACGACATGAAGAATCAGAT 27585
Query 364929 CATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTAT 364988
| ||||| | |||||| | ||||| ||||| ||| | || || ||| | ||| ||
Sbjct 27584 CCTCGCCAATTGTGGTTCGATACAGAATATTCCGGGAATACCGGATGATATCAAGAAGAT 27525
Query 364989 TTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGG 365048
|||||||||||||||||||| || | | | ||| | ||||||||||| ||
Sbjct 27524 CTACAAAACCGTATGGGAAATCTCTAATAAGGTTATTATTAACCAAGCGGCCGATCGTGG 27465
Query 365049 TGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAA 365108
||||| ||| |||||| |||||| | || || | | |||| | | || |
Sbjct 27464 CGCTTTCATCGATCAGAGTCAGTCGCTGAATCTACACGTCGAGAAGCCTAGTTACGGCGT 27405
Query 365109 GCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|||||||| || ||||||||||||||||| ||| | ||||| ||
Sbjct 27404 TCTTACATCGATCCATTTCTACGGGTGGAAGAAAGGTTTGAAGACGGG 27357
Score = 141 bits (156), Expect = 2e-28
Identities = 276/408 (68%), Gaps = 0/408 (0%)
Strand=Plus/Minus
Query 364749 AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACC 364808
||| || ||||| || ||||| || || || ||| | ||||| ||||| | ||| |||||
Sbjct 24628 AGCACCTATGCCGACAGCTTCGACGGCTCAAATCTTAGGAAATAACGAATCCTTTGAACC 24569
Query 364809 GTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAA 364868
|| || || | || | | || || | || |||||||| | ||| ||||| |
Sbjct 24568 GTACACTTCGAACATCTACACCAGACGCGTCTTGTCTGGAGAATTCCAGGTCGTTAACCA 24509
Query 364869 GTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATAT 364928
| || | |||||| |||| | | || |||| ||| ||||||||| | ||
Sbjct 24508 CCATCTGTTGCGCGATCTTACCGATAGAGATCTCTGGGACGACGACATGAAGAATCAGAT 24449
Query 364929 CATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTAT 364988
| ||||| | |||||| | ||||| ||||| ||| | || || ||| | ||| ||
Sbjct 24448 CCTCGCCAATTGTGGTTCGATACAGAATATTCCGGGAATACCGGATGATATCAAGAAGAT 24389
Query 364989 TTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGG 365048
|||||||||||||||||||| || | | | ||| | ||||||||||| ||
Sbjct 24388 CTACAAAACCGTATGGGAAATCTCTAATAAGGTTATTATTAACCAAGCGGCCGATCGTGG 24329
Query 365049 TGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAA 365108
||||| ||| |||||| |||||| | || || | | |||| | | || |
Sbjct 24328 CGCTTTCATCGATCAGAGTCAGTCGCTGAATCTACACGTCGAGAAGCCTAGTTACGGCGT 24269
Query 365109 GCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|||||||| || ||||||||||||||||| ||| | ||||| ||
Sbjct 24268 TCTTACATCGATCCATTTCTACGGGTGGAAGAAAGGTTTGAAGACGGG 24221
>seq1220
Length=9943
Score = 127 bits (140), Expect = 5e-24
Identities = 335/507 (66%), Gaps = 16/507 (3%)
Strand=Plus/Minus
Query 22450 TGGGCGCTGAAATGGATGAACAATGAA----CGTTCATTCGCGGAACGTCTTATTGCATT 22505
||||| ||| ||||||| | || | || || | |||| || ||| | | || ||
Sbjct 7655 TGGGCCCTGCAATGGATCAGCAGTAAAGAGGCGACC-TTCGGTGAGCGTTTAGTAGCTTT 7597
Query 22506 TGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaa 22565
|||| || ||||| |||||||| || ||| ||| | |||| |||||| | |||||
Sbjct 7596 CGCTGCAGTCGAAGGAATTTTCTTCTCCGGAAGCTTTGCTTCAATTTTTTGGTTGAAAAA 7537
Query 22566 aCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCT 22625
| | | |||||||||||||||| || || ||||| ||||| ||| ||||| || |
Sbjct 7536 GAGAGGACTTATGCCGGGTCTAACTTTCTCCAATGAATTAATATCCCGCGATGAAGGATT 7477
Query 22626 TCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAA-CTTCCATAT- 22683
||| || ||||| || | ||| | | |||| | || ||| | || | ||
Sbjct 7476 GCATTATGAATTTGCTTGCTTATTATTT---TCTTATATTGTACAAAAACCGTCGAAATC 7420
Query 22684 --GAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCG 22741
||| | | ||||||||| | || |||||| | || | ||| || ||
Sbjct 7419 TCGAA----TCGTCGATATTATTTGCGACGCGGTTGAAATCGAGCAAGAGTTTCTTACCG 7364
Query 22742 AGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAAT 22801
| || || || || || | || || || || | |||| |||||| |||||| |||
Sbjct 7363 ATGCCTTGCCTGTTAGCTTAATAGGAATGAACTGCAAATCTATGAGTCAGTATATTGAAT 7304
Query 22802 TTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATC 22861
|||| || || | |||| | ||| |||| || ||| |||||| ||||
Sbjct 7303 TTGTCGCTGACAGATTATTGAACGAACTAGGTTGTGAAAAAGTTTATAATTCAAGCAATC 7244
Query 22862 CATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAG 22921
||||||| | ||| | | || || || || || || || || || ||||||| ||
Sbjct 7243 CATTTGATTTTATGAATATCATATCCACGGAGGGTAAAACTAACTTTTTTGAAAAAAAAG 7184
Query 22922 TTGGTGAATACCAAAAAGCAGGTGTTA 22948
|||| ||||||||||||| ||| ||||
Sbjct 7183 TTGGAGAATACCAAAAAGTAGGCGTTA 7157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302912657148710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |