Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 145 7e-30
seq22544 87.8 2e-12
>seq9911
Length=12084
Score = 145 bits (160), Expect = 7e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
|||||| | ||||| || || |||||||| ||| | ||||| | ||||| || |
Sbjct 6211 AATGCAGATCTTTGTGAAGACTTTAACTGGTAAAACAATTACATTGGAAGTGGAACCTTC 6152
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|||||||||||| | || ||| ||||| ||||||||||| || || || |||||
Sbjct 6151 AGACACCATCGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCA 6092
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
|||| || |||| | | |||||||||| | ||||||| | | | ||||| ||
Sbjct 6091 ACAGCGATTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACTCTATCTGATTACAA 6032
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| ||||| || ||| ||||||| ||||||||||||||||||||
Sbjct 6031 TATTCAGAAAGAGTCCACACTTCATTTGGTGTTAAGATTGAGAGGAGG 5984
Score = 132 bits (146), Expect = 4e-26
Identities = 172/232 (74%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | ||||||||||| | ||||||||| | ||||| | ||||| || |||
Sbjct 4579 AATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAA-CCAT 4521
Query 24050 CG-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108
|| ||||||| || | || ||| ||| || ||||||||||| |||||||| || |
Sbjct 4520 CGGACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACC 4461
Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACG---TCAGCGATT 24165
| || | |||||| | ||| || ||| | || |||| | | | || |||| |||
Sbjct 4460 AGCAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCA-CGCTTTCAG--ATT 4404
Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||| || ||||||||||||||| | || ||||| || |||||||||||||
Sbjct 4403 ATAATATCCAAAAAGAATCTACACTGCACTTAGTCTTGCGATTGAGAGGAGG 4352
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| ||||| ||||||||||| | || || | ||||| || ||| |
Sbjct 5262 ATGCAAATTTTTGTTAAAACTTTAACTGGAAAGACCATCACTTTAGAAGTTGAA-CCATC 5204
Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|| ||||| || | || ||| ||||| || |||||||| || || || |||||
Sbjct 5203 TGATACCATTGAAAATGTAAAAGCTAAGATCCAGGATAAAGAAGGTATTCCACCTGATCA 5144
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||| |||| || | || || || ||| | ||||||| | | | | ||||||||
Sbjct 5143 ACAACGACTAATATTCGCTGGTAAACAATTAGAAGATGGTCGTACCCTTTCAGATTATAA 5084
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||| ||||| |||||||| |||||||||| ||| ||||||| || ||
Sbjct 5083 CATCCAAAAGGAATCTACCCTTCATTTAGTATTACGATTGAGGGGTGG 5036
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | ||||| ||||| | || ||||| | ||||| | ||||| || |
Sbjct 4807 AATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTC 4748
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|| || |||||| | | |||| ||||| ||||||||||| |||||||| |||||
Sbjct 4747 TGATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCA 4688
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168
|||| | | |||| | || || || | ||||||| | || | | | |||||||
Sbjct 4687 ACAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCG-TACTTTATCTGATTATA 4629
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
||||||| |||||||| || | ||||| || || ||||| |||||||||
Sbjct 4628 ACATTCAGAAAGAATCCACTCTACATTTGGTATTGAGATTAAGAGGAGGA 4579
Score = 113 bits (124), Expect = 4e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| ||||| |||||||| || | ||||| | ||||| || ||| |
Sbjct 5034 ATGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAA-CCAGC 4976
Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|| ||||| || | || ||| ||||||| ||||| ||||| || |||||||||||
Sbjct 4975 TGATACCATAGAAAATGTGAAAGCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGATCA 4916
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||| | |||| | | ||||||||| | ||||||| | | | ||||| ||
Sbjct 4915 ACAACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAA 4856
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
|||||||| ||||| || |||| | || ||| | ||||||||||||
Sbjct 4855 TATTCAAAAGGAATCAACTCTTCACCTGGTATTACGGTTGAGAGGAGGA 4807
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||||||||| || ||||||||| | ||||| | ||||| ||| | |
Sbjct 5718 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5659
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || || || | || ||| ||| ||| ||||| |||||||| || || || |||
Sbjct 5658 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5599
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | | || | || ||||||||| | ||||||| | | | | || || ||
Sbjct 5598 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGTACATTGTCTGACTACAAT 5539
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| |||||||| | ||||| ||| | | || ||||| ||
Sbjct 5538 ATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGG 5492
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || ||||||||||| || ||||||| | ||||| || |||| |
Sbjct 5490 ATGCAGATATTCGTCAAGACATTAACTGGGAAGACGATTACTTTGGAAGTGGA-GCCATC 5432
Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|| || || || | || ||| ||| ||| || |||||||| || || || || ||
Sbjct 5431 TGATACTATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATCCCACCAGACCA 5372
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||| | |||| | | || || ||| | ||||||| | | | ||||||||
Sbjct 5371 ACAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAA 5312
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||| |||||||| || || | ||||| || ||| |||||||||| ||
Sbjct 5311 CATCCAAAAAGAGTCGACCCTCCATTTGGTATTACGATTGAGAGGTGG 5264
>seq22544
Length=59602
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 101015 AAGGCTTACACGGCTTTCATGTTCACGAATTCGGCGACACAAGCAACGGCTGCACGTCTG 101074
||||| | ||||| || || |||||||||||||||| | | ||||||||||| || |
Sbjct 43584 AAGGCCTTCACGGATTCCACATTCACGAATTCGGCGATAACACCAACGGCTGCATTTCAG 43525
Query 101075 CGGGCGAACATTTTAACCCTACGGGCATGGCTCACGGCGCACCCAACTCTGCCGTTCGTC 101134
| |||| || || |||||| | | || |||||||| ||| | | | ||| ||||
Sbjct 43524 CCGGCGCCCACTTCAACCCTCACAGTAAGGATCACGGCGGACCAGAAGCAGACGTACGTC 43465
Query 101135 ACGTCGGTGATCTTGGCAATATTGATGC 101162
||||||| ||| | || || || || ||
Sbjct 43464 ACGTCGGCGATTTGGGGAACATCGAAGC 43437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429797641892775
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |