Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq9764 178 1e-39 seq9911 87.8 2e-12 >seq9764 Length=88291 Score = 178 bits (196), Expect = 1e-39 Identities = 314/456 (69%), Gaps = 14/456 (3%) Strand=Plus/Plus Query 145337 TCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGC 145396 || ||||| ||||||| |||| | |||| | |||||| ||| ||| ||| | || Sbjct 25046 TCACAACTAGCCTCCAAAGCGGCATAATACAACGTCTCGAAAATCTGCAAGTTTAACATG 25105 Query 145397 ATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGT 145456 ||||| ||||| || |||||||| | || || | |||||||||||| || |||||| Sbjct 25106 CGAGCTTCCTCGCTATCATACGGCATTCTCAACAAAATAAAAGCATCGGCAAGGCCCTGT 25165 Query 145457 ATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATA 145515 ||||| | ||||| || | |||| |||| || | | | || | | || ||||| Sbjct 25166 ATTCCGATACCGATCGGTCTATGTCTCATATTCGACGTTTT-GCTTTCGGGTATCGGATA 25224 Query 145516 TCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAA 145575 ||| ||| || || || |||||||| ||| || | || || | || | ||| Sbjct 25225 ATAGTTAATGTCTATGATCTTGTTCAAGTTGCGCGTGACGATTTTCGTGACGTTCTTCAA 25284 Query 145576 CTTTTCAAAGTCAAAC------CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGAT 145629 ||||| || || || | | || | |||| || |||| ||||| || Sbjct 25285 GTTTTCGAAATCGTACGTCTTCCTATCCGGTTTTACGAACA------TATTCACGGCAAT 25338 Query 145630 CGACGCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCA 145689 |||||| | |||||||||||| | || || | | || | ||||||||||| ||| Sbjct 25339 CGACGCTAGATTACAAACTGCAATTTCGTCTTTGGACGTATACTCTACGATCTCGGTGCA 25398 Query 145690 CAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTC 145749 || ||||||| |||||| |||||||| || || || || ||||| | ||||| ||||| Sbjct 25399 TAAGTTGCTACTTTTGATCGTTCCCAGGTTCTGTTGGTTGCTTTTACGATTGCAAGCGTC 25458 Query 145750 CTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTG 145785 ||||||||||||||| || || || ||||| || Sbjct 25459 CTTGTAGAGCATGTAAGGGGTACCGGTTTCCACTTG 25494 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAG 145114 ||||| |||||||| || || || | ||| || || | || | ||| || ||| | Sbjct 27645 TGATTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTAC 27704 Query 145115 GGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCC 145174 |||||||| || |||||||| || | ||||||||| |||| || || ||||| || Sbjct 27705 GGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCT 27764 Query 145175 ACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCC 145234 | | ||| ||||| | | || || || ||| | | |||| | | ||||||| Sbjct 27765 AGAAGTAAAGAATTTCTTACACCATGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCC 27824 Query 145235 CATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCC 145281 ||||| || ||| | |||| |||||| ||||| || ||||| || Sbjct 27825 CATAGATCTGTTGGCGTTACGTTCCACATATCGTATTGTAAAATACC 27871 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAG 145114 || || |||||||| || || || | ||| || || | || | ||| || ||| | Sbjct 24509 TGGTTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTAC 24568 Query 145115 GGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCC 145174 |||||||| || |||||||| || | ||||||||| |||| || || ||||| || Sbjct 24569 GGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCT 24628 Query 145175 ACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCC 145234 | | ||| ||||| | | || || || ||| | | |||| | | ||||||| Sbjct 24629 AGAAGTAAAGAATTTCTTACACCATGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCC 24688 Query 145235 CATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCC 145281 ||||| || ||| | |||| |||||| ||||| || ||||| || Sbjct 24689 CATAGATTTGTTGGCGTTACGTTCCACATATCGTATTGTAAAATACC 24735 >seq9911 Length=12084 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || || || || || ||||||| ||| || ||||||||||| |||||||| Sbjct 4123 GCCCCCACGTAAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGA 4182 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || ||| || || | || || ||||| |||| ||||||||||| || ||||| Sbjct 4183 AAGAGTTCGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGG 4242 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 || |||||||| || ||| ||| |||| Sbjct 4243 AATACCTTCTTTATC-CTGAATTTTAGCTT 4271 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 || ||||||| || || || || |||||||| ||||| | || || || || Sbjct 4598 ACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGATAAAGTACGACCATCTTCC 4657 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 | ||| || || || | ||||||||||| || || ||||| |||||||||||||| | Sbjct 4658 AACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGTATTCCTTCTTTGTCTTGG 4717 Query 131146 ATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTT 131204 || || |||| || | ||| | |||||| | | || | || | |||| ||| || Sbjct 4718 ATCTT-AGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCACTTCCAATGTAATGGTCTT 4776 Query 131205 ACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || |||||||| || ||||| ||||| Sbjct 4777 TCCCGTAAGAGTTTTCACAAAAATTTGCAT 4806 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA--GTCCTCTAGCTGCTTGC 131095 || || ||||||||||| ||||||| || || | | |||| || || | ||||||| Sbjct 4838 GTTGATTCCTTTTGAATATTGTAAT--CTGATAGAGTGCGACCATCTTCCAATTGCTTGC 4895 Query 131096 CTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC- 131154 | || | || ||||| || || || |||||||||||||| ||||| ||| | | ||| Sbjct 4896 CAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTC-TTGAATCTTTGCT 4954 Query 131155 TTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGA 131214 || | | || | ||||| | | || | || | |||| || ||||| |||| | Sbjct 4955 TTCACATTTTCTATGGTATCAGCTGGTTCCACTTCAAGTGTAATAGTCTTACCAGTTAAA 5014 Query 131215 GTTTTTACGAAAATCTGCAT 131234 ||||| || ||||||||||| Sbjct 5015 GTTTTAACAAAAATCTGCAT 5034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471857006275200