Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq9764 178 1e-39
seq9911 87.8 2e-12
>seq9764
Length=88291
Score = 178 bits (196), Expect = 1e-39
Identities = 314/456 (69%), Gaps = 14/456 (3%)
Strand=Plus/Plus
Query 145337 TCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGC 145396
|| ||||| ||||||| |||| | |||| | |||||| ||| ||| ||| | ||
Sbjct 25046 TCACAACTAGCCTCCAAAGCGGCATAATACAACGTCTCGAAAATCTGCAAGTTTAACATG 25105
Query 145397 ATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGT 145456
||||| ||||| || |||||||| | || || | |||||||||||| || ||||||
Sbjct 25106 CGAGCTTCCTCGCTATCATACGGCATTCTCAACAAAATAAAAGCATCGGCAAGGCCCTGT 25165
Query 145457 ATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATA 145515
||||| | ||||| || | |||| |||| || | | | || | | || |||||
Sbjct 25166 ATTCCGATACCGATCGGTCTATGTCTCATATTCGACGTTTT-GCTTTCGGGTATCGGATA 25224
Query 145516 TCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAA 145575
||| ||| || || || |||||||| ||| || | || || | || | |||
Sbjct 25225 ATAGTTAATGTCTATGATCTTGTTCAAGTTGCGCGTGACGATTTTCGTGACGTTCTTCAA 25284
Query 145576 CTTTTCAAAGTCAAAC------CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGAT 145629
||||| || || || | | || | |||| || |||| ||||| ||
Sbjct 25285 GTTTTCGAAATCGTACGTCTTCCTATCCGGTTTTACGAACA------TATTCACGGCAAT 25338
Query 145630 CGACGCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCA 145689
|||||| | |||||||||||| | || || | | || | ||||||||||| |||
Sbjct 25339 CGACGCTAGATTACAAACTGCAATTTCGTCTTTGGACGTATACTCTACGATCTCGGTGCA 25398
Query 145690 CAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTC 145749
|| ||||||| |||||| |||||||| || || || || ||||| | ||||| |||||
Sbjct 25399 TAAGTTGCTACTTTTGATCGTTCCCAGGTTCTGTTGGTTGCTTTTACGATTGCAAGCGTC 25458
Query 145750 CTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTG 145785
||||||||||||||| || || || ||||| ||
Sbjct 25459 CTTGTAGAGCATGTAAGGGGTACCGGTTTCCACTTG 25494
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAG 145114
||||| |||||||| || || || | ||| || || | || | ||| || ||| |
Sbjct 27645 TGATTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTAC 27704
Query 145115 GGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCC 145174
|||||||| || |||||||| || | ||||||||| |||| || || ||||| ||
Sbjct 27705 GGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCT 27764
Query 145175 ACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCC 145234
| | ||| ||||| | | || || || ||| | | |||| | | |||||||
Sbjct 27765 AGAAGTAAAGAATTTCTTACACCATGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCC 27824
Query 145235 CATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCC 145281
||||| || ||| | |||| |||||| ||||| || ||||| ||
Sbjct 27825 CATAGATCTGTTGGCGTTACGTTCCACATATCGTATTGTAAAATACC 27871
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAG 145114
|| || |||||||| || || || | ||| || || | || | ||| || ||| |
Sbjct 24509 TGGTTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTAC 24568
Query 145115 GGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCC 145174
|||||||| || |||||||| || | ||||||||| |||| || || ||||| ||
Sbjct 24569 GGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCT 24628
Query 145175 ACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCC 145234
| | ||| ||||| | | || || || ||| | | |||| | | |||||||
Sbjct 24629 AGAAGTAAAGAATTTCTTACACCATGTTTAGCGATCTTCGCTTTTAATGCGCTCCAATCC 24688
Query 145235 CATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCC 145281
||||| || ||| | |||| |||||| ||||| || ||||| ||
Sbjct 24689 CATAGATTTGTTGGCGTTACGTTCCACATATCGTATTGTAAAATACC 24735
>seq9911
Length=12084
Score = 87.8 bits (96), Expect = 2e-12
Identities = 110/150 (73%), Gaps = 1/150 (1%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || || || || || || ||||||| ||| || ||||||||||| ||||||||
Sbjct 4123 GCCCCCACGTAAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGA 4182
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || ||| || || | || || ||||| |||| ||||||||||| || |||||
Sbjct 4183 AAGAGTTCGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGG 4242
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156
|| |||||||| || ||| ||| ||||
Sbjct 4243 AATACCTTCTTTATC-CTGAATTTTAGCTT 4271
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085
|| ||||||| || || || || |||||||| ||||| | || || || ||
Sbjct 4598 ACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGATAAAGTACGACCATCTTCC 4657
Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145
| ||| || || || | ||||||||||| || || ||||| |||||||||||||| |
Sbjct 4658 AACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGTATTCCTTCTTTGTCTTGG 4717
Query 131146 ATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTT 131204
|| || |||| || | ||| | |||||| | | || | || | |||| ||| ||
Sbjct 4718 ATCTT-AGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCACTTCCAATGTAATGGTCTT 4776
Query 131205 ACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || |||||||| || ||||| |||||
Sbjct 4777 TCCCGTAAGAGTTTTCACAAAAATTTGCAT 4806
Score = 87.8 bits (96), Expect = 2e-12
Identities = 142/200 (71%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA--GTCCTCTAGCTGCTTGC 131095
|| || ||||||||||| ||||||| || || | | |||| || || | |||||||
Sbjct 4838 GTTGATTCCTTTTGAATATTGTAAT--CTGATAGAGTGCGACCATCTTCCAATTGCTTGC 4895
Query 131096 CTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC- 131154
| || | || ||||| || || || |||||||||||||| ||||| ||| | | |||
Sbjct 4896 CAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTC-TTGAATCTTTGCT 4954
Query 131155 TTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGA 131214
|| | | || | ||||| | | || | || | |||| || ||||| |||| |
Sbjct 4955 TTCACATTTTCTATGGTATCAGCTGGTTCCACTTCAAGTGTAATAGTCTTACCAGTTAAA 5014
Query 131215 GTTTTTACGAAAATCTGCAT 131234
||||| || |||||||||||
Sbjct 5015 GTTTTAACAAAAATCTGCAT 5034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471857006275200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |