Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq9911 89.7 4e-13 >seq9911 Length=12084 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || || || |||||||| || |||||||| | || || | | || Sbjct 5507 AGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCT 5566 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||||||| ||||| || | || | || |||||||| || | ||| || ||||| Sbjct 5567 TCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCT 5626 Query 16844 GCAATTTGCTGCTTC-ACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||||| ||||| || | | | || ||| ||||| ||||| || ||||| Sbjct 5627 TGAATTTT-TGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGT 5685 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||| |||| ||||| |||||||| ||||| Sbjct 5686 TTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || || || |||||||| || || ||||| | || ||| | | || Sbjct 5771 AGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATCT 5830 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||||||| ||||| || | || | || |||||||| || | ||| || ||||| Sbjct 5831 TCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCT 5890 Query 16844 GCAATTTGCTGCTTC-ACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||||| ||||| || | | | || ||| ||||| ||||| || ||||| Sbjct 5891 TGAATTTT-TGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGT 5949 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||| |||| ||||| |||||||| ||||| Sbjct 5950 TTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404957638250950