Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 174 1e-38
seq22504 91.5 1e-13
>seq9911
Length=12084
Score = 174 bits (192), Expect = 1e-38
Identities = 179/231 (77%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| |||||||| || |||||| | || ||| | |||||||| | ||
Sbjct 6211 AATGCAGATCTTTGTGAAGACTTTAACTGGTAAAACAATTACATTGGAAGTGGAACCTTC 6152
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| |||||| | || |||| || | || ||||||||||| ||||| || ||
Sbjct 6151 AGACACCATCGAG--AATGTAAAAGCTAAGATCCAG-GACAAAGAAGGTATTCCCCCAGA 6095
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||||| | || ||||||||||| ||||| ||||||| ||||||| | |||||
Sbjct 6094 TCAACAGCGATTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACTCTATCTGATTA 6035
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||||| ||||| ||||| || ||||| ||| |||| | ||||||||
Sbjct 6034 CAATATTCAGAAAGAGTCCACACTTCATTTGGTGTTAAGATTGAGAGGAGG 5984
Score = 156 bits (172), Expect = 4e-33
Identities = 176/233 (76%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| || ||| | || || || |||| ||| | |||||||| | ||
Sbjct 4807 AATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTC 4748
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||| ||||||||| | || |||| || | || ||||||||||| || || || ||
Sbjct 4747 TGATACTATCGAG--AATGCCAAAGCTAAGATCCAA-GACAAAGAAGGAATACCTCCAGA 4691
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||||| | |||||||| || ||||| || ||||||| ||| ||| | |||||
Sbjct 4690 TCAACAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTA 4631
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|| ||||| ||||||||||| |||||||| || | || ||||||||||||
Sbjct 4630 TAACATTCAGAAAGAATCCACTCTACATTTGGTATTGAGATTAAGAGGAGGAA 4578
Score = 136 bits (150), Expect = 3e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| |||||||| ||| | || || ||| | || ||| | |||||||| | ||
Sbjct 4579 AATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAACCATC 4520
Query 25058 TGACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || | | ||||||||| || ||||||||||| || || || ||||
Sbjct 4519 GGACACCATTGAAAACGTTAAAGCAAAAATCCAA-GACAAAGAAGGTATACCTCCAGACC 4461
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || || | ||||||||||| |||||||| || |||| ||||| | ||||| |
Sbjct 4460 AGCAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCAGATTATA 4401
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||| ||||||||||| || || || ||||| | | | ||||||||
Sbjct 4400 ATATCCAAAAAGAATCTACACTGCACTTAGTCTTGCGATTGAGAGGAGG 4352
Score = 134 bits (148), Expect = 1e-26
Identities = 159/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| | || || ||| | |||||| | ||||| || | ||
Sbjct 4350 ATGCAAATATTTGTTAAGACCCTTACTGGGAAAACTATCACATTGGAAGTAGAACCTTCA 4291
Query 25059 GACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || || || | | |||| |||| ||| || |||||||| ||||| || || ||
Sbjct 4290 GATACAATTGAAAACGTTAAAGCTAAAATTCAG-GATAAAGAAGGTATTCCTCCAGATCA 4232
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || ||||| || |||||||| ||||||| || ||| | ||||||||
Sbjct 4231 GCAGCGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGGCGAACTCTTTCAGATTACAA 4172
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||||||| ||||| || |||||||| || ||
Sbjct 4171 TATTCAAAAGGAATCTACCCTACATTTGGTACT 4139
Score = 132 bits (146), Expect = 4e-26
Identities = 169/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || ||||| || ||||| | || ||| | |||||||| | ||
Sbjct 5034 ATGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAACCAGCT 4975
Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || || || |||| ||||| | ||| ||||| ||||| || || || || ||
Sbjct 4974 GATACCATAGAAAATGTGAAAGCAAAGATTCAA-GACAAGGAAGGAATCCCTCCCGATCA 4916
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | || ||||| ||||| ||||| ||||||| ||||||| | ||||||||
Sbjct 4915 ACAACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAA 4856
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||||||| ||||| || || || | || || || | ||||||||||
Sbjct 4855 TATTCAAAAGGAATCAACTCTTCACCTGGTATTACGGTTGAGAGGAGGAA 4806
Score = 118 bits (130), Expect = 9e-22
Identities = 155/212 (73%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || ||||| || || || ||||||| | ||||| || | |||
Sbjct 5262 ATGCAAATTTTTGTTAAAACTTTAACTGGAAAGACCATCACTTTAGAAGTTGAACCATCT 5203
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || || || | || |||| || | || || |||||||| |||||||||||
Sbjct 5202 GATACCATTGAA--AATGTAAAAGCTAAGATCCAG-GATAAAGAAGGTATTCCACCTGAT 5146
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| || | || || || || |||||||||||||||| ||| || | |||||
Sbjct 5145 CAACAACGACTAATATTCGCTGGTAAACAATTAGAAGATGGTCGTACCCTTTCAGATTAT 5086
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGT 25207
|| || ||||| ||||| || || ||||||||
Sbjct 5085 AACATCCAAAAGGAATCTACCCTTCATTTAGT 5054
>seq22504
Length=90246
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/226 (70%), Gaps = 3/226 (1%)
Strand=Plus/Plus
Query 24985 TACA-AAACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTC 25043
|||| ||||| ||||||||||| || || || || | || || ||| | || || ||
Sbjct 25517 TACAGAAACGCTACAATGCAAATTTTCGTGAAAACACTTACAGGGAAAACAATAACCCTC 25576
Query 25044 GAAGTGGAGTCGTCTGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGG 25102
|| || || | || || || ||||| | || || |||| ||| ||||| |||||
Sbjct 25577 GAGGTTGAACCTTCCGATACGATCGAAAATGTAAAGGCTAAAATTCA-AGACAAGGAAGG 25635
Query 25103 GATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCAC 25162
|| ||||| || || || || |||| || || || ||||| || ||||| | ||| ||
Sbjct 25636 TATCCCACCCGATCAGCAACGTCTTATATTCGCTGGTAAACAGTTGGAAGACGGTCGTAC 25695
Query 25163 TGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTG 25208
| | ||||| ||||| || || |||||||| | || || |||
Sbjct 25696 TCTATCGGATTATAATATCCAGAAGGAATCCACTTTGCACTTGGTG 25741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433188550310075
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |