Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 176 4e-39
seq22504 141 8e-29
seq9764 93.3 4e-14
seq1220 89.7 4e-13
>seq9911
Length=12084
Score = 176 bits (194), Expect = 4e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||||||||||||||| ||||| || | || |||||||||||| | |
Sbjct 5034 ATGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAACCAGCT 4975
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || | ||| ||| |||||||||||||| || || || |||||||||
Sbjct 4974 GATACCATAGAAAATGTGAAAGCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGATCAA 4915
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | |||||||| ||||| || || || ||| ||||| | || ||||||||
Sbjct 4914 CAACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAAT 4855
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||||| ||||| || | || | || || || ||| | |||||
Sbjct 4854 ATTCAAAAGGAATCAACTCTTCACCTGGTATTACGGTTGAGAGGAGG 4808
Score = 172 bits (190), Expect = 5e-38
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||||||||||||||| || || || ||||| | ||||| ||| | |
Sbjct 5262 ATGCAAATTTTTGTTAAAACTTTAACTGGAAAGACCATCACTTTAGAAGTTGAACCATCT 5203
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || | ||| || || || || || || ||||||||||| ||||||
Sbjct 5202 GATACCATTGAAAATGTAAAAGCTAAGATCCAGGATAAAGAAGGTATTCCACCTGATCAA 5143
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| || ||||| || || ||||| ||||| ||| || ||| | || ||||| |||
Sbjct 5142 CAACGACTAATATTCGCTGGTAAACAATTAGAAGATGGTCGTACCCTTTCAGATTATAAC 5083
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| ||| | |||||||| || |||||| | || |||
Sbjct 5082 ATCCAAAAGGAATCTACCCTTCATTTAGTATTACGATTGAGGGGTGGT 5035
Score = 154 bits (170), Expect = 1e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| |||||| | || || ||||| | || | ||||||||| | |
Sbjct 4578 ATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAACCATCG 4519
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | ||| |||||| |||||||| || ||||| || || || ||
Sbjct 4518 GACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACCAG 4459
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || |||||||| ||||| || |||||| |||||| | || ||||| ||
Sbjct 4458 CAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCAGATTATAAT 4399
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||||||||| || | || ||||| ||||||||| | ||||||
Sbjct 4398 ATCCAAAAAGAATCTACACTGCACTTAGTCTTGCGATTGAGAGGAGGT 4351
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || |||||||| |||||||| | || | ||||||||| | |
Sbjct 6210 ATGCAGATCTTTGTGAAGACTTTAACTGGTAAAACAATTACATTGGAAGTGGAACCTTCA 6151
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | ||| || || || ||||| || |||||||| || ||||||
Sbjct 6150 GACACCATCGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCAA 6091
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || ||||||||||| || || || ||| ||||| | || ||||||||
Sbjct 6090 CAGCGATTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACTCTATCTGATTACAAT 6031
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| ||||| | ||||| || || ||||| | ||||||
Sbjct 6030 ATTCAGAAAGAGTCCACACTTCATTTGGTGTTAAGATTGAGAGGAGGT 5983
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| |||||| | || || || || | || | ||||||||| | |
Sbjct 4806 ATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTCT 4747
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || |||| || || |||||||| || || || || || ||||||
Sbjct 4746 GATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCAA 4687
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || ||||| || |||||||| || ||| || || | || ||||| |||
Sbjct 4686 CAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAAC 4627
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||| ||||||||||| ||||||| || ||| |||| | |||||
Sbjct 4626 ATTCAGAAAGAATCCACTCTACATTTGGTATTGAGATTAAGAGGAGG 4580
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || ||||| || || ||| | ||| | |||||||| | |
Sbjct 5490 ATGCAGATATTCGTCAAGACATTAACTGGGAAGACGATTACTTTGGAAGTGGAGCCATCT 5431
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | ||| |||||||||||| || || ||||| ||||| || |||
Sbjct 5430 GATACTATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAA 5371
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || ||||| || ||||| || || ||| || || | || ||||| |||
Sbjct 5370 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAAC 5311
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| |||||||| || ||| | ||||| || || |||||| | || |||
Sbjct 5310 ATCCAAAAAGAGTCGACCCTCCATTTGGTATTACGATTGAGAGGTGGT 5263
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| ||||| || || || ||||| | || | ||||| || | ||
Sbjct 5718 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5659
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | | ||| |||||||||||||||||| || || ||||| || |||
Sbjct 5658 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5599
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || || ||||| || || || ||| ||| || | || || |||||
Sbjct 5598 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGTACATTGTCTGACTACAAT 5539
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| ||||| ||||| || | ||||| ||
Sbjct 5538 ATCCAAAAGGAATCTACTCTCCATTTGGT 5510
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| ||||| || || || ||||| | || | ||||| || | ||
Sbjct 5982 ATGCAAATTTTTGTGAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5923
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | | ||| |||||||||||||||||| || || ||||| || |||
Sbjct 5922 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5863
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || || ||||| || || || ||| ||| || | || || || ||
Sbjct 5862 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACATTGTCTGACTATAAT 5803
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| ||||| ||||| || | ||||| ||
Sbjct 5802 ATCCAAAAGGAATCTACTCTCCATTTGGT 5774
>seq22504
Length=90246
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| | || || ||||| | || || || || ||| | ||
Sbjct 25532 ATGCAAATTTTCGTGAAAACACTTACAGGGAAAACAATAACCCTCGAGGTTGAACCTTCC 25591
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || ||||||||||||||||| ||||| |||||||||||
Sbjct 25592 GATACGATCGAAAATGTAAAGGCTAAAATTCAAGACAAGGAAGGTATCCCACCCGATCAG 25651
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||||||||| || || |||||||| || || || || | || ||||| ||
Sbjct 25652 CAACGTCTTATATTCGCTGGTAAACAGTTGGAAGACGGTCGTACTCTATCGGATTATAAT 25711
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || |||||||| | || || || ||||| ||| | || |||
Sbjct 25712 ATCCAGAAGGAATCCACTTTGCACTTGGTGTTGCGTTTGAGGGGTGGT 25759
Score = 140 bits (154), Expect = 3e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || ||||| | || || || || ||| | ||||||| | || || | ||
Sbjct 21011 ACAGGGAAAACAATAACCCTCGAGGTTGAACCTTCCGATACGATCGAAAATGTAAAGGCT 21070
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||||||||||||||| ||||| ||||||||||| |||||||||||||| || || |||
Sbjct 21071 AAAATTCAAGACAAGGAAGGTATCCCACCCGATCAGCAACGTCTTATATTCGCTGGTAAA 21130
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||||| || || || || | || ||||| || ||||| |||||||||||| ||||
Sbjct 21131 CAGTTGGAAGACGGTCGTACTCTATCGGATTATAATATTCAGAAAGAATCCACCTTACAC 21190
Query 22423 TTAGTTTTGCGATTGCGCGGAGGTTTT 22449
|| || ||||| ||| | || ||| ||
Sbjct 21191 TTGGTATTGCGTTTGAGAGGCGGTATT 21217
>seq9764
Length=88291
Score = 93.3 bits (102), Expect = 4e-14
Identities = 172/248 (69%), Gaps = 17/248 (7%)
Strand=Plus/Plus
Query 130012 GCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTC----- 130066
|| ||||| |||||||||||||| ||||||| ||| ||||| || |||||||| |
Sbjct 25813 GCCTCGACGCGTTTCATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCA 25872
Query 130067 -GCGCTT-TTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTC 130124
|||||| ||| || | ||| | | | || | |||||| ||||| | || ||
Sbjct 25873 CGCGCTTCTTCGATGC-CGGTATTCTTCTTCA-----AATTCAAG-AAATCCAAGATATC 25925
Query 130125 GGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTC 130181
||||||||| || || | ||||| || | || ||| || ||| || ||||| ||
Sbjct 25926 GGCGTGCCAGGGCTCCAAGTAAATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTTGATC 25985
Query 130182 AACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCC 130241
||||| ||| | | ||| ||| | || | | ||| | | |||| ||||||| |||
Sbjct 25986 AACGTAACGCGCCGTATTATTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCC 26045
Query 130242 GTTTGTGC 130249
||| ||||
Sbjct 26046 GTTCGTGC 26053
>seq1220
Length=9943
Score = 89.7 bits (98), Expect = 4e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 117069 GCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTATC 117128
|||||||| |||||||| |||||||| || || || |||||| | || |||| |
Sbjct 7601 GCTTTCGCTGCAGTCGAAGGAATTTTCTTCTCCGGAAGCTTTGCTTCAATTTTTTGGTTG 7542
Query 117129 AAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGACGAA 117188
|| | | ||| || |||||||||||||| || ||| ||||||||||| || || |||
Sbjct 7541 AAAAAGAGAGGACTTATGCCGGGTCTAACTTTCTCCAATGAATTAATATCCCGCGATGAA 7482
Query 117189 GGTTTACACACCGATTTTGCGTGC 117212
|| || || || ||||| |||
Sbjct 7481 GGATTGCATTATGAATTTGCTTGC 7458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419592926938825
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