Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq9911 158 2e-33 seq22504 150 3e-31 >seq9911 Length=12084 Score = 158 bits (174), Expect = 2e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 || |||||||| || || || ||||||||||||||||||||||| || || || | ||| Sbjct 5276 CGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCA 5335 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| || || || || || || || | | ||||||||| ||||| || ||||| || Sbjct 5336 TCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTA 5395 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 |||||||| ||||| || || || || || || | || || |||||||| || || Sbjct 5396 TCTTGAATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGTAATC 5455 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || | |||||||||||||||||||| Sbjct 5456 GTCTTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490 Score = 156 bits (172), Expect = 8e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || || || |||||||| ||||| || || | ||| | |||||||| Sbjct 5774 ACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATCTTCC 5833 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || ||||| || | | ||||||||| ||||| |||||||||||||||||| Sbjct 5834 AATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGA 5893 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || ||||| || ||| || || || || | || || |||||||| || ||||||||| Sbjct 5894 ATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTT 5953 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | ||| || || || || ||||| Sbjct 5954 CCAGTCAAGGTTTTCACAAAAATTTGCAT 5982 Score = 154 bits (170), Expect = 3e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 || ||||| || || || || || || ||||||||||||||||| || || || | ||| Sbjct 5048 CGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACGACCA 5107 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 |||||||| || || || |||||||| |||| |||||| || |||||||| ||||| || Sbjct 5108 TCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTCTTTA 5167 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 || || ||||| || || || || ||||| || | || ||| ||||| || |||||| Sbjct 5168 TCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGTGATG 5227 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| || | || || || || || ||||| Sbjct 5228 GTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || ||||| || || ||||||||||| || || || ||||| || || || | |||||| Sbjct 5999 AACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGATAGAGTGCGACCATCT 6058 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || ||||| ||||| || || | || ||||| || || ||||| ||||| ||||| Sbjct 6059 TCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGGGAATACCTTCTTTGTCC 6118 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| || || || |||||||||||||| | ||| |||||||| || || ||| Sbjct 6119 TGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCCACTTCCAATGTAATTGTT 6178 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | ||||| || || ||||||||| Sbjct 6179 TTACCAGTTAAAGTCTTCACAAAGATCTGCATT 6211 Score = 152 bits (168), Expect = 9e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || || || |||||||| || || || || | ||| | |||||||| Sbjct 5510 ACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCTTCC 5569 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || ||||| || ||||| || | | ||||||||| ||||| |||||||||||||||||| Sbjct 5570 AATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGA 5629 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || ||||| || ||| || || || || | || || |||||||| || ||||||||| Sbjct 5630 ATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTT 5689 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | ||| || || || || ||||| Sbjct 5690 CCAGTCAAGGTTTTTACAAAAATTTGCAT 5718 Score = 150 bits (166), Expect = 3e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 ||||| || ||||| || || || ||||||||||| |||||||| || || || | ||| Sbjct 4364 CGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGAAAGCGTGCGGCCA 4423 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 || || || || |||||||| || || | | ||| ||||| || || || ||||| ||| Sbjct 4424 TCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACCTTCTTTG 4483 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 ||||| || ||||| || ||| || |||||||| | || ||| ||||| || || || Sbjct 4484 TCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAATT 4543 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||||||| || || || || || || || |||||| Sbjct 4544 GTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCATT 4579 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | | | ||||||||| ||||| ||||| ||||| || ||||||||||| | Sbjct 4578 TTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAG 4637 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | | || | |||||||| ||||| || || || || || | | ||||| || || | Sbjct 4638 ATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAG 4697 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || ||||| |||||||| ||||| || ||| | |||||| || || | | ||| | Sbjct 4698 GTATTCCTTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCA 4757 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||||| || ||||| |||||||| || || || || || || |||||| Sbjct 4758 CTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807 Score = 143 bits (158), Expect = 5e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | | || ||||||| ||| || || || || ||||| || || ||||| | Sbjct 4806 TTCCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTG 4865 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | |||||||| || ||||| || || ||||| | | |||||| ||||| | Sbjct 4866 ATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAG 4925 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || ||||||||||||||||||||||| || || || ||||| || |||| ||| | Sbjct 4926 GGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCCA 4985 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| | || || || || || || | || || || || |||||||| Sbjct 4986 CTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || | ||| | |||||| ||||| || || || ||||| || || ||||| || Sbjct 4124 CCCCCACGTAAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAA 4183 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||||||| || || || || || || || | | || || || || ||| Sbjct 4184 AGAGTTCGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGA 4243 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || || ||||| || || || ||| || || || |||| | ||||||| Sbjct 4244 ATACCTTCTTTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACT 4303 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| ||||| || || |||||||| || ||||| ||||| Sbjct 4304 TCCAATGTGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350 >seq22504 Length=90246 Score = 150 bits (166), Expect = 3e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 ||||| |||||||| | ||||| || || ||||| |||||||| || || || | || Sbjct 25746 CGCAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCG 25687 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| ||||| || || |||||||| || | ||| || |||||||| || ||||||||| Sbjct 25686 TCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTG 25627 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 |||||||| || ||||| || ||||| || || | | ||| || || | ||| || Sbjct 25626 TCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATT 25567 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| || || || || || ||||| || |||||| Sbjct 25566 GTTTTCCCTGTAAGTGTTTTCACGAAAATTTGCATT 25531 Score = 143 bits (158), Expect = 5e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 |||||||||||||||| ||||| ||||| || || |||||||| || || || | || Sbjct 21201 CGCAATACCAAGTGTAAGGTGGATTCTTTCTGAATATTATAATCCGATAGAGTACGACCG 21142 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| ||||| || || |||||||| || | ||| || |||||||| || ||||||||| Sbjct 21141 TCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTG 21082 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 |||||||| || ||||| || ||||| || || | | ||| || || | ||| || Sbjct 21081 TCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATT 21022 Query 68427 GTTTTTCCCGTG 68438 ||||| || ||| Sbjct 21021 GTTTTCCCTGTG 21010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921318207006600