Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq2374 98.7 2e-17 >seq2374 Length=96218 Score = 98.7 bits (108), Expect = 2e-17 Identities = 218/322 (68%), Gaps = 5/322 (2%) Strand=Plus/Plus Query 3160 CTGCACGCGCAAAACTCTTACGCC-TACAAATACTTTGGCTGCGAGCTGCTAAACTTTGT 3218 || ||| ||| || | |||||| ||| | | |||| ||||||| |||| ||||| | Sbjct 82672 CTTCACATGCAGAATTTTTACGCGGTACGATT-CTTTATCTGCGAGGTGCTTAACTTCAT 82730 Query 3219 CAACGTTGTCGCACAGATATGCTTCATGAATGCCTTTATAGGCGAAGACTTTTTGTTGTA 3278 |||||| |||| ||||||| ||||||| || |||| | | || || || ||| Sbjct 82731 CAACGTCGTCGGGCAGATATTCTTCATGGATTTCTTTCTGGACGGCGAATTCAGCACGTA 82790 Query 3279 CGGAATCTATGTTACCTTCTTCAACCAGGAAGCCGCCCATCCGAACATGACGAACCCCAT 3338 ||| | | || |||| | || || | | |||| || || ||| || Sbjct 82791 CGGCCGCGACGTGCTGAAATTCACCGAGCTAGAACCGGAA--GAACGGGAAGATCCC-AT 82847 Query 3339 GAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTC 3398 | |||| ||||| | | |||| ||| || || || ||||||||||| ||||| || Sbjct 82848 GGCCAGAGTATTTCCGAAAGTCACCAAATGCACCTTCCATAAATACGGTCCATCGGGTTC 82907 Query 3399 CCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTA 3458 || | || | ||| || || ||| || | ||| ||| | |||||||||||||| || Sbjct 82908 GGTGCAGAAGTTCGACGGCCTGTGCGTCTTGCCGCTGAATATCGTCAACGAGAAGATATA 82967 Query 3459 CATTTTCCTCTGGTTCTGGTTC 3480 | | ||||| ||||| |||||| Sbjct 82968 CGTCTTCCTATGGTTTTGGTTC 82989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12476395717500