Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq9911 125 6e-24 seq22504 87.8 2e-12 seq22544 86.0 5e-12 >seq9911 Length=12084 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || | || |||||| || ||||||| || |||||||| |||||||| ||||| Sbjct 4577 ATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCA 4636 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| |||||| | ||||||||||| | || | ||||||||| || ||| Sbjct 4637 GATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGA 4696 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 || || ||||||||||| ||| || | ||| || | || | || || | | ||| Sbjct 4697 GGTATTCCTTCTTTGTCTTGGATC-TTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTC 4755 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || || |||||||| |||||||| ||||| Sbjct 4756 CACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCAT 4806 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | |||||||| ||||| || ||||| || || ||||| |||||| Sbjct 5510 ACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCTTCC 5569 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 | ||| || |||||| |||| | ||| |||||||| || || |||||||| ||||| | Sbjct 5570 AATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGA 5629 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 || ||| ||||| | ||||| || |||| | || || |||| || | ||||| Sbjct 5630 ATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTT 5689 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| |||||||||||||| ||||| Sbjct 5690 CCAGTCAAGGTTTTTACAAAAATTTGCAT 5718 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | || || |||||||| | |||||||| ||||| ||||| ||||| Sbjct 5033 ATACCACCCCTCAATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCT 5092 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| |||||| | ||||||||||||| | || || || ||||| || || Sbjct 5093 GAAAGGGTACGACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGT 5152 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| |||||||| || ||||| ||||| | ||||| ||| || | | ||| Sbjct 5153 GGAATACCTTCTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCA 5212 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || | |||||| |||||||| ||||| Sbjct 5213 ACTTCTAAAGTGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | || ||| ||||| || | |||||||||||||| || || ||||| Sbjct 4349 ATACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCT 4408 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || | |||||| || || | || | ||| || ||||| ||| Sbjct 4409 GAAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGA 4468 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 || || ||||||||||| || ||||| |||| | | ||||| |||||| | | ||| Sbjct 4469 GGTATACCTTCTTTGTCTTGGAT-TTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTC 4527 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || || |||||||||||||| || ||||| Sbjct 4528 CACTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCAT 4578 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||| || || ||||| | || || ||||| ||||| |||||||| Sbjct 5981 ATACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCA 6040 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| |||||| | ||| || || || |||| | |||||||| || || Sbjct 6041 GATAGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGG 6100 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| ||||| ||||| | || | |||||| | | ||| Sbjct 6101 GGAATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCC 6160 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || | ||| || ||||| |||||||| Sbjct 6161 ACTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCAT 6210 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| |||||||| |||||||| | ||| ||| |||||| | ||| || ||| Sbjct 4838 GTTGATTCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCTTCCAATTGCTTGCCA 4897 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || | ||| ||||| || ||||| || ||||| ||||| ||||||| ||| Sbjct 4898 GCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGAATCTTTGCTTTC 4957 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | ||| || | | ||| || || | || | || || || || | |||| Sbjct 4958 ACATTTTCTATGGTATCAGCTGGTTCCACTTCAAGTGTAATAGTCTTACCAGTTAAAGTT 5017 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||||||||| Sbjct 5018 TTAACAAAAATCTGCAT 5034 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | || || || ||||| | || || |||||||| ||||| ||||| Sbjct 5261 ATACCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCA 5320 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| |||||| | |||||||||||| |||| | ||| |||||||| || Sbjct 5321 GAAAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGT 5380 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || |||||||| || ||| ||| ||||| | ||||| || || | | || Sbjct 5381 GGGATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCC 5440 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||| || || || | || || || || |||||||| Sbjct 5441 ACTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490 >seq22504 Length=90246 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229 ||| || || || | || ||||| || || || || ||||| | ||||||| || Sbjct 25744 CAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTC 25685 Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 ||| | |||||||||||| | || ||||| || || || || || || ||||| ||||| Sbjct 25684 TTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTC 25625 Query 114290 GGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349 ||| || |||| | ||| | || |||| | ||| || || | ||| | || Sbjct 25624 TTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGT 25565 Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| || || || ||||| || ||||| ||||| Sbjct 25564 TTTCCCTGTAAGTGTTTTCACGAAAATTTGCAT 25532 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/212 (69%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 114152 AATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211 ||||||||| | | | ||| || || |||| || |||||||| ||||| || ||||| Sbjct 21217 AATACCGCCTCTCAAACGCAATACCAAGTGTAAGGTGGATTCTTTCTGAATATTATAATC 21158 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 | ||||||| ||||| | |||||||||||| | || ||||| || || || || Sbjct 21157 CGATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGG 21098 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 || || ||||| ||||| ||| || |||| | ||| | || |||| | ||| Sbjct 21097 TGGGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTC 21038 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGT-CAGA 114362 || || | ||| | ||||| || || |||| Sbjct 21037 AACCTCGAGGGTTATTGTTTTCCCTGTGCAGA 21006 >seq22544 Length=59602 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 43833 CGCTTCAATGTTACCTAAATCGCCGACGTGACGCTCTATCGAATTGGGTGCGCCATGATT 43892 |||||| ||||| || ||||||||||||||||| | | | ||| |||| |||| Sbjct 43436 CGCTTCGATGTTCCCCAAATCGCCGACGTGACGTACGTCTGCTTCTGGTCCGCCGTGATC 43495 Query 43893 GCGACCAAAAGGATTGAAATGTTCGCCGGCGGACGTACATCCGTTACTGGTGTCGCCGAA 43952 || ||| ||||| || ||||||| || | || ||||| || | |||||||| Sbjct 43496 CTTACTGTGAGGGTTGAAGTGGGCGCCGGCTGAAATGCAGCCGTTGGTGTTATCGCCGAA 43555 Query 43953 TTCGTGCACGTGAAATCCATGAAGACCTTT 43982 |||||| | ||| ||||| ||||| ||||| Sbjct 43556 TTCGTGAATGTGGAATCCGTGAAGGCCTTT 43585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419999196154860