Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq18668 98.7 8e-16 seq18667 98.7 8e-16 seq9911 96.9 3e-15 seq770 89.7 4e-13 >seq18668 Length=26442 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || | || || |||||||| Sbjct 8267 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGAACTAAGGAA 8208 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || |||||| |||| ||| || ||||| Sbjct 8207 CCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCTTAA 8168 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || | || || |||||||| Sbjct 8267 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGAACTAAGGAA 8208 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || |||||| |||| ||| || ||||| Sbjct 8207 CCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCTTAA 8168 Score = 95.1 bits (104), Expect = 1e-14 Identities = 83/100 (83%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || | || || |||||||| Sbjct 19596 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGAACTAAGGAA 19537 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || |||||| |||| | | || ||||| Sbjct 19536 CCATAACTGATTTAATGAGCCTTTCGCGCTTTCACCTTAA 19497 Score = 95.1 bits (104), Expect = 1e-14 Identities = 83/100 (83%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || | || || |||||||| Sbjct 19596 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGAACTAAGGAA 19537 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || |||||| |||| | | || ||||| Sbjct 19536 CCATAACTGATTTAATGAGCCTTTCGCGCTTTCACCTTAA 19497 >seq18667 Length=37089 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || | || || |||||||| Sbjct 13453 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGAACTAAGGAA 13394 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || |||||| |||| ||| || ||||| Sbjct 13393 CCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCTTAA 13354 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || | || || |||||||| Sbjct 13453 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGAACTAAGGAA 13394 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || |||||| |||| ||| || ||||| Sbjct 13393 CCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCTTAA 13354 >seq9911 Length=12084 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||||||||||| | | ||||| |||||| ||| ||| |||||||| |||||||| | Sbjct 5983 ACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGA 6042 Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | | || || | || |||||||||||||||||||| |||| ||||| ||||| | Sbjct 6043 TAGAGTG-CGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGG 6101 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCG 34077 | | | ||||||||| | | || |||| ||| | | || | || ||| Sbjct 6102 GAATACCTTCTTTGTCC-TGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCC 6160 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||| | || |||||||| || |||| || ||||||||||| |||||| Sbjct 6161 ACTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATT 6211 Score = 82.4 bits (90), Expect = 6e-11 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||||| ||| | ||||| ||||| || ||||| ||||| |||||||||| Sbjct 4808 CCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGAT 4867 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | | || || | || |||||||||||||| |||||||||| || || ||||| Sbjct 4868 AGAGTG-CGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATC 4920 >seq770 Length=36114 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/100 (82%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAA--CTGAGTAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| |||| |||||||| |||||| || ||||| || Sbjct 13189 CATGTATTAGCTCTAGAATTACCACAGTTACCCAAGTAAATGTGAGTACGAACTAAGAAA 13248 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 | | ||||||| || |||||| ||||||| || ||||| Sbjct 13249 CTATAACTGATTTAATGAGCCTTTCGTGGGTTCACCTTAA 13288 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/100 (82%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAA--CTGAGTAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| |||| |||||||| |||||| || ||||| || Sbjct 13189 CATGTATTAGCTCTAGAATTACCACAGTTACCCAAGTAAATGTGAGTACGAACTAAGAAA 13248 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 | | ||||||| || |||||| ||||||| || ||||| Sbjct 13249 CTATAACTGATTTAATGAGCCTTTCGTGGGTTCACCTTAA 13288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396934620976810