Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq18668 98.7 8e-16
seq18667 98.7 8e-16
seq9911 96.9 3e-15
seq770 89.7 4e-13
>seq18668
Length=26442
Score = 98.7 bits (108), Expect = 8e-16
Identities = 84/100 (84%), Gaps = 4/100 (4%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 115586
|||||||| |||||||||||||||| ||||||||||||| || | || || ||||||||
Sbjct 8267 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGAACTAAGGAA 8208
Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
||| ||||||| || |||||| |||| ||| || |||||
Sbjct 8207 CCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCTTAA 8168
Score = 98.7 bits (108), Expect = 8e-16
Identities = 84/100 (84%), Gaps = 4/100 (4%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 114389
|||||||| |||||||||||||||| ||||||||||||| || | || || ||||||||
Sbjct 8267 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGAACTAAGGAA 8208
Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
||| ||||||| || |||||| |||| ||| || |||||
Sbjct 8207 CCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCTTAA 8168
Score = 95.1 bits (104), Expect = 1e-14
Identities = 83/100 (83%), Gaps = 4/100 (4%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 115586
|||||||| |||||||||||||||| ||||||||||||| || | || || ||||||||
Sbjct 19596 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGAACTAAGGAA 19537
Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
||| ||||||| || |||||| |||| | | || |||||
Sbjct 19536 CCATAACTGATTTAATGAGCCTTTCGCGCTTTCACCTTAA 19497
Score = 95.1 bits (104), Expect = 1e-14
Identities = 83/100 (83%), Gaps = 4/100 (4%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 114389
|||||||| |||||||||||||||| ||||||||||||| || | || || ||||||||
Sbjct 19596 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGAACTAAGGAA 19537
Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
||| ||||||| || |||||| |||| | | || |||||
Sbjct 19536 CCATAACTGATTTAATGAGCCTTTCGCGCTTTCACCTTAA 19497
>seq18667
Length=37089
Score = 98.7 bits (108), Expect = 8e-16
Identities = 84/100 (84%), Gaps = 4/100 (4%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 115586
|||||||| |||||||||||||||| ||||||||||||| || | || || ||||||||
Sbjct 13453 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGAACTAAGGAA 13394
Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
||| ||||||| || |||||| |||| ||| || |||||
Sbjct 13393 CCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCTTAA 13354
Score = 98.7 bits (108), Expect = 8e-16
Identities = 84/100 (84%), Gaps = 4/100 (4%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 114389
|||||||| |||||||||||||||| ||||||||||||| || | || || ||||||||
Sbjct 13453 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACGAACTAAGGAA 13394
Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
||| ||||||| || |||||| |||| ||| || |||||
Sbjct 13393 CCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCTTAA 13354
>seq9911
Length=12084
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||||||||||| | | ||||| |||||| ||| ||| |||||||| |||||||| |
Sbjct 5983 ACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGA 6042
Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
| | || || | || |||||||||||||||||||| |||| ||||| ||||| |
Sbjct 6043 TAGAGTG-CGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGG 6101
Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCG 34077
| | | ||||||||| | | || |||| ||| | | || | || |||
Sbjct 6102 GAATACCTTCTTTGTCC-TGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCC 6160
Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128
||| | || |||||||| || |||| || ||||||||||| ||||||
Sbjct 6161 ACTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATT 6211
Score = 82.4 bits (90), Expect = 6e-11
Identities = 88/114 (77%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|||||||||| ||| | ||||| ||||| || ||||| ||||| ||||||||||
Sbjct 4808 CCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGAT 4867
Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
| | || || | || |||||||||||||| |||||||||| || || |||||
Sbjct 4868 AGAGTG-CGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATC 4920
>seq770
Length=36114
Score = 89.7 bits (98), Expect = 4e-13
Identities = 82/100 (82%), Gaps = 4/100 (4%)
Strand=Plus/Plus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAA--CTGAGTAAGATCTAAGGAA 114389
|||||||| |||||||||||||||| |||| |||||||| |||||| || ||||| ||
Sbjct 13189 CATGTATTAGCTCTAGAATTACCACAGTTACCCAAGTAAATGTGAGTACGAACTAAGAAA 13248
Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
| | ||||||| || |||||| ||||||| || |||||
Sbjct 13249 CTATAACTGATTTAATGAGCCTTTCGTGGGTTCACCTTAA 13288
Score = 89.7 bits (98), Expect = 4e-13
Identities = 82/100 (82%), Gaps = 4/100 (4%)
Strand=Plus/Plus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAA--CTGAGTAAGATCTAAGGAA 115586
|||||||| |||||||||||||||| |||| |||||||| |||||| || ||||| ||
Sbjct 13189 CATGTATTAGCTCTAGAATTACCACAGTTACCCAAGTAAATGTGAGTACGAACTAAGAAA 13248
Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
| | ||||||| || |||||| ||||||| || |||||
Sbjct 13249 CTATAACTGATTTAATGAGCCTTTCGTGGGTTCACCTTAA 13288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396934620976810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |