Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 150 4e-31
seq22504 118 3e-21
>seq9911
Length=12084
Score = 150 bits (166), Expect = 4e-31
Identities = 148/191 (77%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||||||||| ||||| || | || || ||||| ||||| |||||||| || || |||
Sbjct 5300 TCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAG 5359
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| ||| ||||| |||||| ||||||||||| || ||||| ||||| || |||
Sbjct 5360 ATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTTTGCTTTTACATTT 5419
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| |||| ||| | || ||||| | || ||||||||||| || | |||||||||
Sbjct 5420 TCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACG 5479
Query 288463 AATATCTGCAT 288473
|||||||||||
Sbjct 5480 AATATCTGCAT 5490
Score = 147 bits (162), Expect = 5e-30
Identities = 163/216 (75%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320
|||||| | ||| | || ||| ||||| ||||| || || | || || || || ||
Sbjct 4138 AAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGTTCGCCCATC 4197
Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTT 288377
||| |||||||||||||| ||||||| |||||| || |||| || || ||||||||
Sbjct 4198 TTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTG---ATCTGGAGGAATACCTTCTTT 4254
Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437
|||||| ||||| ||||| |||||||| || | ||| | ||||||||| | |||||
Sbjct 4255 ATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTGAT 4314
Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| || || ||||| || ||||| |||||
Sbjct 4315 AGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 288264 TACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTC 288323
||| | ||||| || ||| |||||||| ||||| || | || || || || |||||
Sbjct 5053 TACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACGACCATCTTC 5112
Query 288324 TAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTG 288383
||||||||| || ||||| || || || |||||| | ||| || ||||||||||||||
Sbjct 5113 TAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTCTTTATCCTG 5172
Query 288384 GATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTT 288443
||| || ||||| || ||||| || | ||| | ||| ||||| | ||||| |||||
Sbjct 5173 GATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGTGATGGTCTT 5232
Query 288444 CCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | ||| || || || || |||||
Sbjct 5233 TCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262
Score = 122 bits (134), Expect = 2e-22
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 288264 TACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTC 288323
||| || |||| || ||| ||||| ||||| || || | || ||||| || |||||
Sbjct 4825 TACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCTTC 4884
Query 288324 TAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTG 288383
||||| || || || || |||| ||| |||||| ||||||||||| || || ||
Sbjct 4885 CAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTG 4944
Query 288384 GATTTTCGCTTTCACGTTTTCTATAGAATC-GCTCGATTCTACTTCGAGCGTGATCGTCT 288442
|| || |||||||| |||||||| | ||| ||| | ||| ||||| || || || ||||
Sbjct 4945 AATCTTTGCTTTCACATTTTCTATGGTATCAGCT-GGTTCCACTTCAAGTGTAATAGTCT 5003
Query 288443 TCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || | ||| || || || ||||||||
Sbjct 5004 TACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034
Score = 116 bits (128), Expect = 9e-21
Identities = 144/196 (73%), Gaps = 6/196 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||||||||||||||| || | |||||||| || || || |||||||| || || ||
Sbjct 4387 TTCTTTTTGGATATTATAATCTGAAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAA 4446
Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|||| ||| || || ||| || || |||||||| || |||||||| ||||| ||
Sbjct 4447 AATCAAACGTTGCTG---GTCTGGAGGTATACCTTCTTTGTCTTGGATTTTTGCTTTAAC 4503
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|||||| || | || | ||| ||||| | || || || || || || ||||| ||
Sbjct 4504 GTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTT 4563
Query 288459 GACGAATATCTGCATT 288474
|| || || ||||||
Sbjct 4564 TACAAAGATTTGCATT 4579
Score = 107 bits (118), Expect = 5e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||||||||||||||| | | || || || ||||| ||||| || || |||||
Sbjct 5791 TTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAA 5850
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| | ||| ||||| |||||| ||||| || || || ||||| ||||| |||||
Sbjct 5851 GATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTT 5910
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | |||| | || ||||| | || || || || || |||| || || ||
Sbjct 5911 TTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCAC 5970
Query 288462 GAATATCTGCAT 288473
|| || |||||
Sbjct 5971 AAAAATTTGCAT 5982
Score = 104 bits (114), Expect = 6e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||||||||| ||||| | | || || || ||||| ||||| || || |||||
Sbjct 5527 TTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCTTCCAATTGCTTGCCAGCGAA 5586
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| | ||| ||||| |||||| ||||| || || || ||||| ||||| |||||
Sbjct 5587 GATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTT 5646
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | |||| | || ||||| | || || || || || |||| || || ||
Sbjct 5647 TTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTAC 5706
Query 288462 GAATATCTGCAT 288473
|| || |||||
Sbjct 5707 AAAAATTTGCAT 5718
Score = 100 bits (110), Expect = 7e-16
Identities = 155/220 (70%), Gaps = 6/220 (3%)
Strand=Plus/Plus
Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317
||| | ||| | ||| | ||| |||||| || || ||||| || | | || || ||
Sbjct 4591 TCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGATAAAGTACGACC 4650
Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTC 288374
||||| || ||||| || || || || | |||||||||| ||||| ||||||||
Sbjct 4651 ATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGA---TCTGGAGGTATTCCTTC 4707
Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGT 288434
||| || ||||| || ||||| | || || |||| ||| | ||| ||||| | ||
Sbjct 4708 TTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCACTTCCAATGT 4767
Query 288435 GATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| ||||| || || ||||| || || || || ||||||
Sbjct 4768 AATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807
>seq22504
Length=90246
Score = 118 bits (130), Expect = 3e-21
Identities = 142/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||||||||| || | || || || |||||||| || ||||| || |||||
Sbjct 25723 TTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAA 25664
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|| ||||| || ||| |||||| ||||| || || || ||||| || || || ||
Sbjct 25663 TATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATT 25604
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | |||| | ||| || ||||| || || || ||||| || || || || ||
Sbjct 25603 TTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGTAAGTGTTTTCAC 25544
Query 288462 GAATATCTGCATT 288474
||| || ||||||
Sbjct 25543 GAAAATTTGCATT 25531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179255306327590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |