Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq9911 150 4e-31 seq22504 118 3e-21 >seq9911 Length=12084 Score = 150 bits (166), Expect = 4e-31 Identities = 148/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| ||||| || | || || ||||| ||||| |||||||| || || ||| Sbjct 5300 TCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAG 5359 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||| ||||| |||||| ||||||||||| || ||||| ||||| || ||| Sbjct 5360 ATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTTTGCTTTTACATTT 5419 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| ||| | || ||||| | || ||||||||||| || | ||||||||| Sbjct 5420 TCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACG 5479 Query 288463 AATATCTGCAT 288473 ||||||||||| Sbjct 5480 AATATCTGCAT 5490 Score = 147 bits (162), Expect = 5e-30 Identities = 163/216 (75%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 |||||| | ||| | || ||| ||||| ||||| || || | || || || || || Sbjct 4138 AAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGTTCGCCCATC 4197 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTT 288377 ||| |||||||||||||| ||||||| |||||| || |||| || || |||||||| Sbjct 4198 TTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTG---ATCTGGAGGAATACCTTCTTT 4254 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 |||||| ||||| ||||| |||||||| || | ||| | ||||||||| | ||||| Sbjct 4255 ATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTGAT 4314 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| || ||||| ||||| Sbjct 4315 AGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 288264 TACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTC 288323 ||| | ||||| || ||| |||||||| ||||| || | || || || || ||||| Sbjct 5053 TACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACGACCATCTTC 5112 Query 288324 TAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTG 288383 ||||||||| || ||||| || || || |||||| | ||| || |||||||||||||| Sbjct 5113 TAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTCTTTATCCTG 5172 Query 288384 GATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTT 288443 ||| || ||||| || ||||| || | ||| | ||| ||||| | ||||| ||||| Sbjct 5173 GATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGTGATGGTCTT 5232 Query 288444 CCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||| || || || || ||||| Sbjct 5233 TCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262 Score = 122 bits (134), Expect = 2e-22 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 288264 TACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTC 288323 ||| || |||| || ||| ||||| ||||| || || | || ||||| || ||||| Sbjct 4825 TACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCTTC 4884 Query 288324 TAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTG 288383 ||||| || || || || |||| ||| |||||| ||||||||||| || || || Sbjct 4885 CAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTG 4944 Query 288384 GATTTTCGCTTTCACGTTTTCTATAGAATC-GCTCGATTCTACTTCGAGCGTGATCGTCT 288442 || || |||||||| |||||||| | ||| ||| | ||| ||||| || || || |||| Sbjct 4945 AATCTTTGCTTTCACATTTTCTATGGTATCAGCT-GGTTCCACTTCAAGTGTAATAGTCT 5003 Query 288443 TCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || | ||| || || || |||||||| Sbjct 5004 TACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 116 bits (128), Expect = 9e-21 Identities = 144/196 (73%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||||||||| || | |||||||| || || || |||||||| || || || Sbjct 4387 TTCTTTTTGGATATTATAATCTGAAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAA 4446 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| ||| || || ||| || || |||||||| || |||||||| ||||| || Sbjct 4447 AATCAAACGTTGCTG---GTCTGGAGGTATACCTTCTTTGTCTTGGATTTTTGCTTTAAC 4503 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 |||||| || | || | ||| ||||| | || || || || || || ||||| || Sbjct 4504 GTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTT 4563 Query 288459 GACGAATATCTGCATT 288474 || || || |||||| Sbjct 4564 TACAAAGATTTGCATT 4579 Score = 107 bits (118), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||||||||| | | || || || ||||| ||||| || || ||||| Sbjct 5791 TTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAA 5850 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | ||| ||||| |||||| ||||| || || || ||||| ||||| ||||| Sbjct 5851 GATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTT 5910 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | |||| | || ||||| | || || || || || |||| || || || Sbjct 5911 TTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCAC 5970 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 5971 AAAAATTTGCAT 5982 Score = 104 bits (114), Expect = 6e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||| ||||| | | || || || ||||| ||||| || || ||||| Sbjct 5527 TTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCTTCCAATTGCTTGCCAGCGAA 5586 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | ||| ||||| |||||| ||||| || || || ||||| ||||| ||||| Sbjct 5587 GATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTT 5646 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | |||| | || ||||| | || || || || || |||| || || || Sbjct 5647 TTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTAC 5706 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 5707 AAAAATTTGCAT 5718 Score = 100 bits (110), Expect = 7e-16 Identities = 155/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 ||| | ||| | ||| | ||| |||||| || || ||||| || | | || || || Sbjct 4591 TCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGATAAAGTACGACC 4650 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTC 288374 ||||| || ||||| || || || || | |||||||||| ||||| |||||||| Sbjct 4651 ATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGA---TCTGGAGGTATTCCTTC 4707 Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGT 288434 ||| || ||||| || ||||| | || || |||| ||| | ||| ||||| | || Sbjct 4708 TTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCACTTCCAATGT 4767 Query 288435 GATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || ||||| || || ||||| || || || || |||||| Sbjct 4768 AATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807 >seq22504 Length=90246 Score = 118 bits (130), Expect = 3e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||||||||| || | || || || |||||||| || ||||| || ||||| Sbjct 25723 TTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAA 25664 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || ||||| || ||| |||||| ||||| || || || ||||| || || || || Sbjct 25663 TATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATT 25604 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | |||| | ||| || ||||| || || || ||||| || || || || || Sbjct 25603 TTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGTAAGTGTTTTCAC 25544 Query 288462 GAATATCTGCATT 288474 ||| || |||||| Sbjct 25543 GAAAATTTGCATT 25531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179255306327590