Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq9911 114 1e-20 seq9764 114 1e-20 seq22544 98.7 1e-15 seq22504 84.2 2e-11 >seq9911 Length=12084 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| | || | ||| | || |||||||| |||||||| ||||| | | || || Sbjct 4589 AATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGATAAAGTACGA 4648 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | ||||| | ||| || || ||| |||| | ||||| || || ||||| ||||||||| Sbjct 4649 CCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGTATTCCTTCT 4708 Query 64346 TTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGT 64404 || ||||| | | || ||||| || ||| | |||||| | |||||||| | || Sbjct 4709 TTGTCTTGGA-TCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCACTTCCAATGT 4767 Query 64405 TACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 | |||||| || || | |||||| || |||||||||||| Sbjct 4768 AATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||||| | |||| ||||| || ||||| ||||| ||||| ||||||| Sbjct 5035 ACCACCCCTCAATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCTGA 5094 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | ||||| | || || || || | || || || || || || || || Sbjct 5095 AAGGGTACGACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTGG 5154 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| || || || || |||||| || | |||||| | || || Sbjct 5155 AATACCTTCTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAAC 5214 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||| | |||||| || || |||||||| || ||||||||||| Sbjct 5215 TTCTAAAGTGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262 Score = 105 bits (116), Expect = 7e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||||| | |||| || | || ||||||||||| || || ||||||| Sbjct 4351 ACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGA 4410 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || | || || |||||| |||| | || |||||||| ||||| Sbjct 4411 AAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGG 4470 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 || |||||||| ||||| | |||||||||| || || | || || | |||| Sbjct 4471 TATACCTTCTTTGTCTTGGA-TTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCA 4529 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||||| || | || || || || | ||||||||| || ||||||||| Sbjct 4530 CTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCATT 4579 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | ||||| || || ||||| ||||| |||||||| | Sbjct 5983 ACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGA 6042 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| | |||||||||||| | || | ||||| || || || || Sbjct 6043 TAGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGGG 6102 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| || || || || |||||| ||| | || || | ||||| Sbjct 6103 AATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCCAC 6162 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTA 64447 ||| | || | || || || || ||||| || || || || |||||| || Sbjct 6163 TTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATTCTA 6214 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| | ||| | || ||||| ||||| || ||||| || | | || || | || Sbjct 5506 AAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATC 5565 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | |||||||| || | || | || || ||||| || || || ||||| || || Sbjct 5566 TTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTC 5625 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| |||||| ||||| || | |||||| | || ||||| | || | ||| Sbjct 5626 TTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGT 5685 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||| |||||||| ||||||||||| Sbjct 5686 TTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| | ||| | || ||||| ||||| || || || || | | || || | || Sbjct 5770 AAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATC 5829 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | |||||||| || | || | || || ||||| || || || ||||| || || Sbjct 5830 TTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTC 5889 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| |||||| ||||| || | |||||| | || ||||| | || | ||| Sbjct 5890 TTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGT 5949 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||| ||||| || ||||||||||| Sbjct 5950 TTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982 >seq9764 Length=88291 Score = 114 bits (126), Expect = 1e-20 Identities = 350/532 (66%), Gaps = 17/532 (3%) Strand=Plus/Plus Query 154905 ACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGCCTTTTTG 154964 ||||||||||||||||| || || | ||| | || || |||||||| | || Sbjct 25819 ACGCGTTTCATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGCGCT 25878 Query 154965 TCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATATATGTCGGCGTGCCACGGC 155024 ||||| ||| | || ||| |||||||| ||||| | || ||||||||||| ||| Sbjct 25879 TCTTCGATGCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAGGGC 25938 Query 155025 TCTAAATATACGGCCATCGC-----GCCT-TTGCGTTTTCCTCCTTGATCCACGTGACGC 155078 || || || | ||| | || |||| ||| ||||| |||||||| |||| |||| Sbjct 25939 TCCAAGTAAATGGCGAAAGCTCCCGGCCTCTTG---TTTCCACCTTGATCAACGTAACGC 25995 Query 155079 ACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGTGCCA 155138 | ||||||| | || | | || || ||| ||| ||| |||||| ||||| Sbjct 25996 GCCGTATTATTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCG 26055 Query 155139 CGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCAAACCTCCGCCGTAT 155198 || | || || | || || || || ||||| | ||| ||| | | Sbjct 26056 GCAATATAAGTTCCTTTCGCTCTTATATTGTGCACGTTTACGCCGATACCGCCGGCTGAC 26115 Query 155199 TTAGATATTTGCGCACAGTCCGCCAA--AGTTTCGTACATTCCTTTGATGCTGTCTTCTT 155256 || || || | || || | |||||| || | | | || || | ||| |||||| Sbjct 26116 TTCGAAATGTAGGCGCATTGCGCCAAGCAGGT--GAAAATCCCCTCGATCGAGTCTTCGG 26173 Query 155257 TCAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGG-GCAGCCGGCCGCAAATAAT 155315 || | |||| | ||| || ||||| | ||||||| || | |||| |||| || | Sbjct 26174 GCATCATCAAGAGGAAGCATGAAGAAAGCTGAGGTTTTGGTGTAGCC-GCCGAGAACAGA 26232 Query 155316 GTAGGACTAGCGTGTGT-AAACATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGCGGC 155374 || ||||||||||| || ||| || | | | ||| ||||| |||||||| |||| Sbjct 26233 GTCGGACTAGCGTGCGTAAAATATCTCTCCGATAGGTAA-TTGTAGGTTTCGATAACGGC 26291 Query 155375 GTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTGA 155426 || || || ||||| || || | || || ||||||||||| |||||| Sbjct 26292 ATCGATATCTTCGCCGTGGATTCCAACAGCTACCCGCATCAGCATATGTTGA 26343 Score = 111 bits (122), Expect = 2e-19 Identities = 356/547 (65%), Gaps = 4/547 (1%) Strand=Plus/Plus Query 153699 GCGGCCGGTTTAGTTCGCAAATAATACATGCCGGTTTTCAAACCACGTTTCCAAGTGTGC 153758 ||||| ||||| || | | |||||||| || || |||||||| ||||| || Sbjct 24191 GCGGCTGGTTTCGTCCTTAGGTAATACATTCCCGTCTTCAAACCTTTCTTCCACCCGTAG 24250 Query 153759 ATGTGCACGCTAGTTAATAACGC-GAAACTGGGCTGCGCTATAAACACGTTAAACGACTG 153817 | || | | | ||| ||||| | |||| |||| | | | | || | |||||| Sbjct 24251 AAATGGAT-CGATGTAAGAACGCCGTAACTAGGCTTCTCGACGTGTAGATTCAGCGACTG 24309 Query 153818 GCTCTGATCGATGAAAGCGCCGCGATCGGCCGCCATGTCAATCAAGTTTTTACTGCTCAT 153877 |||||||||||||||||||| ||||||||||| || ||| | ||| | || Sbjct 24310 ACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATAATAACCTTATTAGAGAT 24369 Query 153878 TTCCCACACAGTTTTGTAGACGGCTTTAATGTCGTCGGGTATGCGATCAATTTTCTGCAC 153937 |||||| || |||||||||| || || || || ||||| | ||| ||||| | Sbjct 24370 TTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGAATATTCTGTAT 24429 Query 153938 ACTGCCTCCGGCCGCTATAATGGAATTGCGCATGTGGTCGTCGTACAAATTTAG-TCGAC 153996 || | || | || ||| ||||| |||||| | | || | ||| Sbjct 24430 CGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCCCAGAGATCTCTATCGGT 24489 Query 153997 ATAAATCTTCAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCA 154056 | | ||| | || || ||||||| || || || || || | ||| ||||| | Sbjct 24490 A-AGATCGCGCAACAGATGGTGGTTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGG 24548 Query 154057 CATACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAG 154116 || | || ||| |||| || || |||||||| || ||||| |||||||| || | Sbjct 24549 TGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCG 24608 Query 154117 TTGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCA 154176 ||||| |||||| || | | ||||| |||| | ||| ||||| || || | Sbjct 24609 AAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCATGTTTAGCGATCTTCG 24668 Query 154177 ATTTTAAATCTGCCCAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCA 154236 |||||| | ||||| ||| | || || || ||||||||||| |||||||| | Sbjct 24669 CTTTTAATGCGCTCCAATCCCATAGATTTGTTGGCGTTACGTTCCACATATCGTATTGTA 24728 Query 154237 AAACACC 154243 ||| ||| Sbjct 24729 AAATACC 24735 Score = 111 bits (122), Expect = 2e-19 Identities = 356/547 (65%), Gaps = 4/547 (1%) Strand=Plus/Plus Query 153699 GCGGCCGGTTTAGTTCGCAAATAATACATGCCGGTTTTCAAACCACGTTTCCAAGTGTGC 153758 ||||| ||||| |||| | ||||||||| || || |||||||| ||||| || Sbjct 27327 GCGGCTGGTTTCGTTCTTAGATAATACATTCCCGTCTTCAAACCTTTCTTCCACCCGTAG 27386 Query 153759 ATGTGCACGCTAGTTAATAACGC-GAAACTGGGCTGCGCTATAAACACGTTAAACGACTG 153817 | || | | | ||| ||||| | |||| |||| | | | | || | |||||| Sbjct 27387 AAATGGAT-CGATGTAAGAACGCCGTAACTAGGCTTCTCGACGTGTAGATTCAGCGACTG 27445 Query 153818 GCTCTGATCGATGAAAGCGCCGCGATCGGCCGCCATGTCAATCAAGTTTTTACTGCTCAT 153877 |||||||||||||||||||| ||||||||||| || ||| | ||| | || Sbjct 27446 ACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATAATAACCTTATTAGAGAT 27505 Query 153878 TTCCCACACAGTTTTGTAGACGGCTTTAATGTCGTCGGGTATGCGATCAATTTTCTGCAC 153937 |||||| || |||||||||| || || || || ||||| | ||| ||||| | Sbjct 27506 TTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGAATATTCTGTAT 27565 Query 153938 ACTGCCTCCGGCCGCTATAATGGAATTGCGCATGTGGTCGTCGTACAAAT-TTAGTCGAC 153996 || | || | || ||| ||||| |||||| | | || | ||| Sbjct 27566 CGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCCCAGAGATCTCTATCGGT 27625 Query 153997 ATAAATCTTCAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCA 154056 | | ||| | || || || |||| || || || || || | ||| ||||| | Sbjct 27626 A-AGATCGCGCAACAGATGGTGATTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGG 27684 Query 154057 CATACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAG 154116 || | || ||| |||| || || |||||||| || ||||| |||||||| || | Sbjct 27685 TGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCG 27744 Query 154117 TTGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCA 154176 ||||| |||||| || | | ||||| |||| | ||| ||||| || || | Sbjct 27745 AAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCATGTTTAGCGATCTTCG 27804 Query 154177 ATTTTAAATCTGCCCAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCA 154236 |||||| | ||||| ||| | | || || ||||||||||| |||||||| | Sbjct 27805 CTTTTAATGCGCTCCAATCCCATAGATCTGTTGGCGTTACGTTCCACATATCGTATTGTA 27864 Query 154237 AAACACC 154243 ||| ||| Sbjct 27865 AAATACC 27871 >seq22544 Length=59602 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 115361 GGACTGCACGGTTTTCATGTTCACGAATTCGGCGACACTAGCAACGGCTGCACGTCCGCC 115420 || || ||||| || || |||||||||||||||| | | ||||||||||| || ||| Sbjct 43582 GGCCTTCACGGATTCCACATTCACGAATTCGGCGATAACACCAACGGCTGCATTTCAGCC 43523 Query 115421 GGCGAGCATTTCAACCCGTTTAACCAAGATCACGGCGCACCGAACGCACCCGTCCGCCAC 115480 |||| || |||||||| | | |||||||||| ||| | ||| ||| || ||| Sbjct 43522 GGCGCCCACTTCAACCCTCACAGTAAGGATCACGGCGGACCAGAAGCAGACGTACGTCAC 43463 Query 115481 GTCGGTGATCTGGGCAACGTCGAA 115504 ||||| ||| |||| ||| ||||| Sbjct 43462 GTCGGCGATTTGGGGAACATCGAA 43439 >seq22504 Length=90246 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || || || ||||| | | || || ||||||| | ||| || || Sbjct 25728 GTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTCTTCCAACTGTTTACCA 25669 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || || ||||| ||||| || || ||||| || ||||| ||||| |||| Sbjct 25668 GCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTT 25609 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||| | || || || | |||| || || || || | ||| Sbjct 25608 ACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGTAAGTGTT 25549 Query 64427 TTTACGAAAATTTGCATTTTA 64447 || ||||||||||||||| || Sbjct 25548 TTCACGAAAATTTGCATTGTA 25528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499479885988200