Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 143 2e-29
seq22504 109 5e-19
seq9764 100 3e-16
seq22544 89.7 5e-13
>seq9911
Length=12084
Score = 143 bits (158), Expect = 2e-29
Identities = 162/215 (75%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--A 45185
||| |||| ||||| || ||||| ||||||||||||||||| ||| | | | |
Sbjct 4366 CAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATC--TGAAAGCGTGCGGCCA 4423
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||||||||| || || | ||||| ||||||||||| || || || ||||||||
Sbjct 4424 TCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACCTTCTTTG 4483
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| |||||| ||| | ||| | |||||| || | || ||||| | ||||
Sbjct 4484 TCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAATT 4543
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || || |||||||||||||| ||||||||
Sbjct 4544 GTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCAT 4578
Score = 129 bits (142), Expect = 5e-25
Identities = 157/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCG 45188
||| | ||| || || |||||||||||||||||||| || ||| | || | |||
Sbjct 5773 CACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCA--GACAATGTTCGGCCATCT 5830
Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248
|||||||| || || ||| | || || ||||| ||||| || || |||||||| || |||
Sbjct 5831 TCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCT 5890
Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308
||||||||| ||| | ||| | || ||||| | ||| ||||| | |||| |||
Sbjct 5891 TGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTT 5950
Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || | ||||| ||||||||||||||
Sbjct 5951 TTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982
Score = 125 bits (138), Expect = 6e-24
Identities = 168/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| | | || || || || || || |||||||||||||| ||||| ||||
Sbjct 4805 ATTCCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAAT-- 4862
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
|||| | | || ||| |||||||| || || || ||||||| ||||| || || |
Sbjct 4863 CTGATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGG 4922
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| || || ||||| || |||||||| ||| ||| | ||||| ||| || | | |
Sbjct 4923 GAGGGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTT 4982
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| || |||| || || || |||| |||||| |||||||| |||||
Sbjct 4983 CCACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 45129 AACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCG 45188
|| |||| ||| || || |||||||||||||| |||||||| | ||| | |||
Sbjct 5051 AATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACGACCATCT 5110
Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248
|| |||||||| || ||| |||| | |||||| || || || ||||| |||||||||||
Sbjct 5111 TCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTCTTTATCC 5170
Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308
|| || || ||| | ||| | ||| || || | || ||||| | ||| | ||
Sbjct 5171 TGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGTGATGGTC 5230
Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || |||| |||||| ||||||||||||||
Sbjct 5231 TTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262
Score = 125 bits (138), Expect = 6e-24
Identities = 156/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCG 45188
||| | ||| || || ||||||||||||||||| || || ||| | | | |||
Sbjct 5509 CACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCA--GACAATGTACGGCCATCT 5566
Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248
|||||||| || || ||| | || || ||||| ||||| || || |||||||| || |||
Sbjct 5567 TCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCT 5626
Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308
||||||||| ||| | ||| | || ||||| | ||| ||||| | |||| |||
Sbjct 5627 TGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTT 5686
Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || | ||||||||||||||||||||
Sbjct 5687 TTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718
Score = 118 bits (130), Expect = 1e-21
Identities = 151/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAAT 45194
||| || || ||||||||||| ||||| ||||| ||| | || | ||| ||||||
Sbjct 4147 ATGTAGGGTAGATTCCTTTTGAATATTGTAATC--TGAAAGAGTTCGCCCATCTTCCAAT 4204
Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254
||||||||||| | ||||| || ||||| || || ||||| ||||||||||| ||||||
Sbjct 4205 TGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTATCCTGAATT 4264
Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314
|| ||| | ||| | || || |||| || ||||| | || | ||||| ||
Sbjct 4265 TTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTGATAGTTTTCCCA 4324
Query 45315 GTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || ||||| ||||||||
Sbjct 4325 GTAAGGGTCTTAACAAATATTTGCAT 4350
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 45129 AACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCG 45188
|| || | ||| || || || || |||||||| |||||||| | || |||
Sbjct 5279 AATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCT 5338
Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248
||||||||||| || || | ||||| ||||| ||||| || || || ||||||||||||
Sbjct 5339 TCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCT 5398
Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308
||||||||| ||| | ||| | || || || | ||| ||||| | ||||| |||
Sbjct 5399 TGAATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTC 5458
Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || |||| || || || || || |||||
Sbjct 5459 TTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490
Score = 93.3 bits (102), Expect = 4e-14
Identities = 162/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| | | ||||| || | ||| || || ||||| || || || ||||||||
Sbjct 4577 ATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCA 4636
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| ||||| ||||| || || | || || || || || || ||
Sbjct 4637 GATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGA 4696
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGC-TTCT--ACGGTGTCGGAAGAC 45287
|| || |||||||| ||||| || || |||| || |||| | || || ||||
Sbjct 4697 GGTATTCCTTCTTTGTCTTGGATCTTAGCTTTG---GCATTCTCGATAGTATCAGAAGGT 4753
Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| | |||| || || || || |||||||| ||||||||||||||
Sbjct 4754 TCCACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCAT 4806
>seq22504
Length=90246
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187
|||||| | |||| || |||||||| |||||||||||||| | || | ||
Sbjct 25744 CAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTC 25685
Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247
||||| ||||| || ||| |||| | |||||||| || || || || ||||| || ||
Sbjct 25684 TTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTC 25625
Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307
||||||||| || | ||| | || ||||||| || || ||||| || | ||
Sbjct 25624 TTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGT 25565
Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| || || || ||||| || |||||||||||
Sbjct 25564 TTTCCCTGTAAGTGTTTTCACGAAAATTTGCAT 25532
>seq9764
Length=88291
Score = 100 bits (110), Expect = 3e-16
Identities = 298/455 (65%), Gaps = 16/455 (4%)
Strand=Plus/Minus
Query 123600 CAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAAT 123659
||||| |||||||| || || |||||||||||||| ||||| ||||| | |||| |||
Sbjct 25494 CAAGTGGAAACCGGTACCCCTTACATGCTCTACAAGGACGCTTGCAATCGTAAAAGCAAC 25435
Query 123660 CAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT--TATCGAATACA 123717
|| ||| ||||||| || ||| |||| || | ||| |||| || || | ||||
Sbjct 25434 CAACAGAACCTGGGAACGATCAAAAGTAGCAACTTATGCACCGAGATCGTAGAGTATACG 25375
Query 123718 GCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGT-- 123775
| | || || | || || |||||| | || |||||| ||||||| | |||
Sbjct 25374 TCCA--AAGACGAAATTGCAGTTTGTAATCTAGCGTCGATTGCCGTGAATATGTTCGTAA 25317
Query 123776 ---CGAAAACGGCG-CTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAA 123831
|| | | | | | | ||||| ||| | || | | || |||| | || |
Sbjct 25316 AACCGGATAGGAAGACGTACGATTTCGAAAACTTGAAGAACGTCACGAAAA---TCGTCA 25260
Query 123832 AG---AATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGT 123888
| || |||||||| || || || |||| | |||||| | ||| ||
Sbjct 25259 CGCGCAACTTGAACAAGATCATAGACATTAACTATTATCCGATACCCGAAAGCAAAACGT 25200
Query 123889 CTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAA 123948
| ||| ||| ||| |||||| |||| | || || || || | ||||| || ||| |
Sbjct 25199 CGAATATGAGACATAGACCGATCGGTATCGGAATACAGGGCCTTGCCGATGCTTTTATTT 25140
Query 123949 TGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAA 124008
|| || | |||||||| || ||||| ||||| || | || ||| || ||| |
Sbjct 25139 TGTTGAGAATGCCGTATGATAGCGAGGAAGCTCGCATGTTAAACTTGCAGATTTTCGAGA 25080
Query 124009 CAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAA 124043
| | ||||| | |||||||||||| || || |||
Sbjct 25079 CGTTGTATTATGCCGCTTTGGAGGCTAGTTGTGAA 25045
>seq22544
Length=59602
Score = 89.7 bits (98), Expect = 5e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 102357 GCTTCAACGTTTCCCAAGTCGCCGACGTGCCGTATGATTGAATCGGGCGCACCATGATCC 102416
||||| | ||| ||||| ||||||||||| |||| | || || || | || ||||||
Sbjct 43437 GCTTCGATGTTCCCCAAATCGCCGACGTGACGTACGTCTGCTTCTGGTCCGCCGTGATCC 43496
Query 102417 ATGTTGAACGGATTGAAATGTTCGCCGGCCGAGGTGCATCCGTTGCTCATGTCTCCGAAT 102476
| || || ||||| || ||||||| || |||| |||||| | | || ||||||
Sbjct 43497 TTACTGTGAGGGTTGAAGTGGGCGCCGGCTGAAATGCAGCCGTTGGTGTTATCGCCGAAT 43556
Query 102477 TCGTGAACGTGAAAGCCGTGCAAACCTTT 102505
||||||| ||| || ||||| | |||||
Sbjct 43557 TCGTGAATGTGGAATCCGTGAAGGCCTTT 43585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451854010693800
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