Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq9911 143 2e-29 seq22504 109 5e-19 seq9764 100 3e-16 seq22544 89.7 5e-13 >seq9911 Length=12084 Score = 143 bits (158), Expect = 2e-29 Identities = 162/215 (75%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--A 45185 ||| |||| ||||| || ||||| ||||||||||||||||| ||| | | | | Sbjct 4366 CAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATC--TGAAAGCGTGCGGCCA 4423 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||||||||| || || | ||||| ||||||||||| || || || |||||||| Sbjct 4424 TCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACCTTCTTTG 4483 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| |||||| ||| | ||| | |||||| || | || ||||| | |||| Sbjct 4484 TCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAATT 4543 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || |||||||||||||| |||||||| Sbjct 4544 GTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCAT 4578 Score = 129 bits (142), Expect = 5e-25 Identities = 157/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCG 45188 ||| | ||| || || |||||||||||||||||||| || ||| | || | ||| Sbjct 5773 CACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCA--GACAATGTTCGGCCATCT 5830 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 |||||||| || || ||| | || || ||||| ||||| || || |||||||| || ||| Sbjct 5831 TCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCT 5890 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 ||||||||| ||| | ||| | || ||||| | ||| ||||| | |||| ||| Sbjct 5891 TGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTT 5950 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | ||||| |||||||||||||| Sbjct 5951 TTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982 Score = 125 bits (138), Expect = 6e-24 Identities = 168/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | | || || || || || || |||||||||||||| ||||| |||| Sbjct 4805 ATTCCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAAT-- 4862 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 |||| | | || ||| |||||||| || || || ||||||| ||||| || || | Sbjct 4863 CTGATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGG 4922 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | || || ||||| || |||||||| ||| ||| | ||||| ||| || | | | Sbjct 4923 GAGGGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTT 4982 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| || |||| || || || |||| |||||| |||||||| ||||| Sbjct 4983 CCACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45129 AACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCG 45188 || |||| ||| || || |||||||||||||| |||||||| | ||| | ||| Sbjct 5051 AATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACGACCATCT 5110 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 || |||||||| || ||| |||| | |||||| || || || ||||| ||||||||||| Sbjct 5111 TCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTCTTTATCC 5170 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 || || || ||| | ||| | ||| || || | || ||||| | ||| | || Sbjct 5171 TGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGTGATGGTC 5230 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||| |||||| |||||||||||||| Sbjct 5231 TTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262 Score = 125 bits (138), Expect = 6e-24 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCG 45188 ||| | ||| || || ||||||||||||||||| || || ||| | | | ||| Sbjct 5509 CACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCA--GACAATGTACGGCCATCT 5566 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 |||||||| || || ||| | || || ||||| ||||| || || |||||||| || ||| Sbjct 5567 TCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCT 5626 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 ||||||||| ||| | ||| | || ||||| | ||| ||||| | |||| ||| Sbjct 5627 TGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTT 5686 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | |||||||||||||||||||| Sbjct 5687 TTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718 Score = 118 bits (130), Expect = 1e-21 Identities = 151/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAAT 45194 ||| || || ||||||||||| ||||| ||||| ||| | || | ||| |||||| Sbjct 4147 ATGTAGGGTAGATTCCTTTTGAATATTGTAATC--TGAAAGAGTTCGCCCATCTTCCAAT 4204 Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 ||||||||||| | ||||| || ||||| || || ||||| ||||||||||| |||||| Sbjct 4205 TGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTATCCTGAATT 4264 Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314 || ||| | ||| | || || |||| || ||||| | || | ||||| || Sbjct 4265 TTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTGATAGTTTTCCCA 4324 Query 45315 GTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || ||||| |||||||| Sbjct 4325 GTAAGGGTCTTAACAAATATTTGCAT 4350 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45129 AACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCG 45188 || || | ||| || || || || |||||||| |||||||| | || ||| Sbjct 5279 AATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCT 5338 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 ||||||||||| || || | ||||| ||||| ||||| || || || |||||||||||| Sbjct 5339 TCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCT 5398 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 ||||||||| ||| | ||| | || || || | ||| ||||| | ||||| ||| Sbjct 5399 TGAATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTC 5458 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||| || || || || || ||||| Sbjct 5459 TTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | | ||||| || | ||| || || ||||| || || || |||||||| Sbjct 4577 ATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCA 4636 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| ||||| ||||| || || | || || || || || || || Sbjct 4637 GATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGA 4696 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGC-TTCT--ACGGTGTCGGAAGAC 45287 || || |||||||| ||||| || || |||| || |||| | || || |||| Sbjct 4697 GGTATTCCTTCTTTGTCTTGGATCTTAGCTTTG---GCATTCTCGATAGTATCAGAAGGT 4753 Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| | |||| || || || || |||||||| |||||||||||||| Sbjct 4754 TCCACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCAT 4806 >seq22504 Length=90246 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 |||||| | |||| || |||||||| |||||||||||||| | || | || Sbjct 25744 CAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTC 25685 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 ||||| ||||| || ||| |||| | |||||||| || || || || ||||| || || Sbjct 25684 TTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTC 25625 Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 ||||||||| || | ||| | || ||||||| || || ||||| || | || Sbjct 25624 TTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGT 25565 Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || || ||||| || ||||||||||| Sbjct 25564 TTTCCCTGTAAGTGTTTTCACGAAAATTTGCAT 25532 >seq9764 Length=88291 Score = 100 bits (110), Expect = 3e-16 Identities = 298/455 (65%), Gaps = 16/455 (4%) Strand=Plus/Minus Query 123600 CAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAAT 123659 ||||| |||||||| || || |||||||||||||| ||||| ||||| | |||| ||| Sbjct 25494 CAAGTGGAAACCGGTACCCCTTACATGCTCTACAAGGACGCTTGCAATCGTAAAAGCAAC 25435 Query 123660 CAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT--TATCGAATACA 123717 || ||| ||||||| || ||| |||| || | ||| |||| || || | |||| Sbjct 25434 CAACAGAACCTGGGAACGATCAAAAGTAGCAACTTATGCACCGAGATCGTAGAGTATACG 25375 Query 123718 GCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGT-- 123775 | | || || | || || |||||| | || |||||| ||||||| | ||| Sbjct 25374 TCCA--AAGACGAAATTGCAGTTTGTAATCTAGCGTCGATTGCCGTGAATATGTTCGTAA 25317 Query 123776 ---CGAAAACGGCG-CTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAA 123831 || | | | | | | ||||| ||| | || | | || |||| | || | Sbjct 25316 AACCGGATAGGAAGACGTACGATTTCGAAAACTTGAAGAACGTCACGAAAA---TCGTCA 25260 Query 123832 AG---AATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGT 123888 | || |||||||| || || || |||| | |||||| | ||| || Sbjct 25259 CGCGCAACTTGAACAAGATCATAGACATTAACTATTATCCGATACCCGAAAGCAAAACGT 25200 Query 123889 CTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAA 123948 | ||| ||| ||| |||||| |||| | || || || || | ||||| || ||| | Sbjct 25199 CGAATATGAGACATAGACCGATCGGTATCGGAATACAGGGCCTTGCCGATGCTTTTATTT 25140 Query 123949 TGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAA 124008 || || | |||||||| || ||||| ||||| || | || ||| || ||| | Sbjct 25139 TGTTGAGAATGCCGTATGATAGCGAGGAAGCTCGCATGTTAAACTTGCAGATTTTCGAGA 25080 Query 124009 CAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAA 124043 | | ||||| | |||||||||||| || || ||| Sbjct 25079 CGTTGTATTATGCCGCTTTGGAGGCTAGTTGTGAA 25045 >seq22544 Length=59602 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 102357 GCTTCAACGTTTCCCAAGTCGCCGACGTGCCGTATGATTGAATCGGGCGCACCATGATCC 102416 ||||| | ||| ||||| ||||||||||| |||| | || || || | || |||||| Sbjct 43437 GCTTCGATGTTCCCCAAATCGCCGACGTGACGTACGTCTGCTTCTGGTCCGCCGTGATCC 43496 Query 102417 ATGTTGAACGGATTGAAATGTTCGCCGGCCGAGGTGCATCCGTTGCTCATGTCTCCGAAT 102476 | || || ||||| || ||||||| || |||| |||||| | | || |||||| Sbjct 43497 TTACTGTGAGGGTTGAAGTGGGCGCCGGCTGAAATGCAGCCGTTGGTGTTATCGCCGAAT 43556 Query 102477 TCGTGAACGTGAAAGCCGTGCAAACCTTT 102505 ||||||| ||| || ||||| | ||||| Sbjct 43557 TCGTGAATGTGGAATCCGTGAAGGCCTTT 43585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451854010693800