Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq9764 100 3e-16
>seq9764
Length=88291
Score = 100 bits (110), Expect = 3e-16
Identities = 215/317 (68%), Gaps = 6/317 (2%)
Strand=Plus/Plus
Query 115666 TGATCGATG-AAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTC 115724
||||||||| ||||| || ||||| ||||| | ||| | | |||| | ||||||
Sbjct 27450 TGATCGATGAAAGCG-CCACGATCGGCCGCTTGGTTAATAATAACCTTATTAGAGATTTC 27508
Query 115725 CCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGA 115784
||| || ||| |||||| ||||| |||||||| || || || ||||| || || ||
Sbjct 27509 CCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGAATATTCTGTATCGA 27568
Query 115785 GCCAC--CTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTG 115842
|||| || | || || ||| |||||| || | ||||||| | | | |
Sbjct 27569 ACCACAATTGGC--GAGGATCTGATTCTTCATGTCGTCGTCCCAGAGATCTCTATCGGTA 27626
Query 115843 AGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA 115902
||||| || || || | ||| || || || || || | | | ||||||
Sbjct 27627 AGATCGCGCAACAGATGGTGATTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGGTG 27686
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|||||||| | ||||| || |||||| | || || || || |||||||| || || ||
Sbjct 27687 TAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCGAA 27746
Query 115963 GCTGTGGGCATGGGTGC 115979
||||| ||||| |||||
Sbjct 27747 GCTGTCGGCATAGGTGC 27763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613304704279800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |