Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq9764 100 3e-16 >seq9764 Length=88291 Score = 100 bits (110), Expect = 3e-16 Identities = 215/317 (68%), Gaps = 6/317 (2%) Strand=Plus/Plus Query 115666 TGATCGATG-AAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTC 115724 ||||||||| ||||| || ||||| ||||| | ||| | | |||| | |||||| Sbjct 27450 TGATCGATGAAAGCG-CCACGATCGGCCGCTTGGTTAATAATAACCTTATTAGAGATTTC 27508 Query 115725 CCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGA 115784 ||| || ||| |||||| ||||| |||||||| || || || ||||| || || || Sbjct 27509 CCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGAATATTCTGTATCGA 27568 Query 115785 GCCAC--CTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTG 115842 |||| || | || || ||| |||||| || | ||||||| | | | | Sbjct 27569 ACCACAATTGGC--GAGGATCTGATTCTTCATGTCGTCGTCCCAGAGATCTCTATCGGTA 27626 Query 115843 AGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA 115902 ||||| || || || | ||| || || || || || | | | |||||| Sbjct 27627 AGATCGCGCAACAGATGGTGATTAACGACCTGGAATTCTCCAGACAAGACGCGTCTGGTG 27686 Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||| | ||||| || |||||| | || || || || |||||||| || || || Sbjct 27687 TAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCGTCGAA 27746 Query 115963 GCTGTGGGCATGGGTGC 115979 ||||| ||||| ||||| Sbjct 27747 GCTGTCGGCATAGGTGC 27763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613304704279800