Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 116 9e-21
>seq9911
Length=12084
Score = 116 bits (128), Expect = 9e-21
Identities = 148/201 (74%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|||||||| || |||||||||| |||||||||| ||| || | |||||||||| |||
Sbjct 5516 TGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCTTCCAATTGC 5575
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || |||||||| | ||| || ||||| || || ||||| || ||||| |||
Sbjct 5576 TTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAAT-TTT 5634
Query 199547 TGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
||||| ||| ||| | || || | || || || ||||| || || || || || ||
Sbjct 5635 TGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGT 5694
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
| ||||| |||||||||||
Sbjct 5695 CAAGGTTTTTACAAAAATTTG 5715
Score = 116 bits (128), Expect = 9e-21
Identities = 148/201 (74%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|||||||| || |||||||||| || ||||||| ||| || | |||||||||| |||
Sbjct 5780 TGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATCTTCCAATTGC 5839
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || |||||||| | ||| || ||||| || || ||||| || ||||| |||
Sbjct 5840 TTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAAT-TTT 5898
Query 199547 TGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
||||| ||| ||| | || || | || || || ||||| || || || || || ||
Sbjct 5899 TGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGT 5958
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
| |||||||||||||||||
Sbjct 5959 CAAGGTTTTCACAAAAATTTG 5979
Score = 107 bits (118), Expect = 5e-18
Identities = 155/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | || ||||| || || || || | ||| || |||| ||||| | ||
Sbjct 4591 TCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGATAAAGTACGACC 4650
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| ||| || || || || || | |||||| || || ||| |||||||||
Sbjct 4651 ATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGTATTCCTTCTTT 4710
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTC--GACGGTGTCTGTTGTTTCTACATCCAACGTG 199591
|| || ||||| |||| | |||| || || || | | ||| || ||||| ||
Sbjct 4711 GTCTTGGATCTTA-GCTTTG-GCATTCTCGATAGTATCAGAAGGTTCCACTTCCAATGTA 4768
Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| ||||| ||||||||||||||||||||
Sbjct 4769 ATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTG 4803
Score = 95.1 bits (104), Expect = 3e-14
Identities = 143/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
||||| |||||||| ||||||| ||| || |||| | ||| | ||||||||||| ||
Sbjct 5288 TGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCTTCCAATTGT 5347
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || || ||||| | ||| || ||||| || || |||||| || ||||| |||
Sbjct 5348 TTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGAAT-TTT 5406
Query 199547 TGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
||| || || ||| | || || | || || || ||||| || |||||||| || ||
Sbjct 5407 TGCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTCTTCCCAGT 5466
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
| || || || || || ||
Sbjct 5467 TAATGTCTTGACGAATATCTG 5487
Score = 91.5 bits (100), Expect = 3e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|| || || || |||||||||| ||| || || | | || | |||||||| | ||
Sbjct 5060 TGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACGACCATCTTCTAATTGT 5119
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || ||||| || || || || || || || ||| |||||| ||||| |||||
Sbjct 5120 TTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTCTTTATCCTGGATCTTA 5179
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
|| || ||| | ||| || | || ||| || || || ||||| ||||| || ||
Sbjct 5180 GCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGTGATGGTCTTTCCAGTT 5239
Query 199607 AGAGTTTTCACAAAAATTTG 199626
| |||||| |||||||||||
Sbjct 5240 AAAGTTTTAACAAAAATTTG 5259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178522754244135
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |