Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 277 2e-69
seq9911 116 4e-21
>seq1220
Length=9943
Score = 277 bits (306), Expect = 2e-69
Identities = 603/900 (67%), Gaps = 2/900 (0%)
Strand=Plus/Plus
Query 132595 ACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAG 132654
||||| | |||||| ||||| || || ||||| |||||||| |||||||| |||||| |
Sbjct 7159 ACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCGTG 7218
Query 132655 GAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATC-AG 132713
|| |||| |||||||||| || || ||| || || || ||| | | | | ||
Sbjct 7219 GATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAA-CTTTTTCACAACCTAG 7277
Query 132714 GTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAG 132773
||| | | ||||| || || || || || || || ||| | || ||| || |
Sbjct 7278 TTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCAT 7337
Query 132774 TCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTC 132833
||| | | | || |||| || ||||| ||||| ||||||||| | ||||||||
Sbjct 7338 TCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGTC 7397
Query 132834 GGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAA 132893
| | || || | || | ||| ||| || | || || | ||
Sbjct 7398 GCAAATAATATCGACGATTCGAGATTTCGACGGTTTTTGTACAATATAAGAAAATAATAA 7457
Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953
||||||||| || ||||||| || || || | ||| || | ||| ||| |||||| |
Sbjct 7458 GCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTTAG 7517
Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013
|| ||||| || || | ||||| | |||||| || | || || || || || |||||
Sbjct 7518 ACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAGAA 7577
Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073
| || ||||| || |||||||| || | ||||| ||||| || || ||||| |||
Sbjct 7578 AATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTACTGCT 7637
Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTT 133133
|||||| |||| ||||| | || |||| ||||| || | ||||| || || ||
Sbjct 7638 GATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCGCATT 7697
Query 133134 CAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACAT 133193
|| ||| |||||||| || | | | || || || || || | |||||
Sbjct 7698 GAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGTACAT 7757
Query 133194 TTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCAC 133253
||| || | ||||| || || |||||||| |||||||| ||||| || || ||
Sbjct 7758 TTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGTTAC 7817
Query 133254 CTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGC 133313
|| || |||||| ||||| || ||||||||||| || ||||| || ||| || ||
Sbjct 7818 TTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGATGCAGC 7877
Query 133314 GAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTC 133373
|||||| |||| |||| ||||| ||||| | ||||| ||| | || | ||| |
Sbjct 7878 GAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTCCAATG 7937
Query 133374 GCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTT 133433
| || | || | || || || ||| ||||||||||| || ||||||| |||
Sbjct 7938 ATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCTTGTTT 7997
Query 133434 GTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTC 133493
||| || ||| || || | ||||| ||| || |||| ||||| || ||| |||||
Sbjct 7998 GTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGGATTTTC 8057
>seq9911
Length=12084
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || |||||||| | || || |||||||| || | || || ||| | ||
Sbjct 5718 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5659
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | ||||| | |||| |||||| | ||||| || || || || | |||||
Sbjct 5658 GATACAATTGAAAACG-TAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCA 5600
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| ||||| || |||| || | || || | ||||||||
Sbjct 5599 ACAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGTACATTGTCTGACTACAA 5540
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| | || || ||||||||||| ||||| ||||| ||
Sbjct 5539 TATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGG 5492
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| | || || |||||||| || | || || ||| | ||
Sbjct 5982 ATGCAAATTTTTGTGAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5923
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | ||||| | |||| |||||| | ||||| || || || || | |||||
Sbjct 5922 GATACAATTGAAAACG-TAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCA 5864
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| ||||| || |||| || | || || | ||||| ||
Sbjct 5863 ACAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACATTGTCTGACTATAA 5804
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| | || || ||||||||||| ||||| ||||| ||
Sbjct 5803 TATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGG 5756
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||||||||| || || || || || || ||||| ||||| | || || || | |
Sbjct 4350 ATGCAAATATTTGTTAAGACCCTTACTGGGAAAACTATCACATTGGAAGTAGAACCTTCA 4291
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | || ||||| |||||| ||||| | || ||||| || ||||| | || ||
Sbjct 4290 GATACAATTGAAAACG-TTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCTCCAGATCA 4232
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | || || ||||| |||| || | ||| || || || |||||
Sbjct 4231 GCAGCGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGGCGAACTCTTTCAGATTACAA 4172
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461
|| ||||||||| | || || |||||||| || || ||
Sbjct 4171 TATTCAAAAGGAATCTACCCTACATTTGGTACTTCGCTT 4133
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| | || || || |||||||| | || || || | |
Sbjct 5262 ATGCAAATTTTTGTTAAAACTTTAACTGGAAAGACCATCACTTTAGAAGTTGAACCATCT 5203
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | ||| | |||| || |||| || ||||| || ||||| | || |||
Sbjct 5202 GATACCATTGAAAATGTAAAAGCTAAGATCCAGGATAAAGAAGGTATTCCACCTGATCAA 5143
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || || || | ||| || ||||| | || || | || ||||| || || |||
Sbjct 5142 CAACGACTAATATTCGCTGGTAAACAATTAGAAGATGGTCGTACCCTTTCAGATTATAAC 5083
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| | || || ||||| || | || ||||| || ||
Sbjct 5082 ATCCAAAAGGAATCTACCCTTCATTTAGTATTACGATTGAGGGGTGG 5036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500007711715200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |