Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq9764 123 3e-23
seq1220 118 1e-21
>seq9764
Length=88291
Score = 123 bits (136), Expect = 3e-23
Identities = 339/513 (66%), Gaps = 16/513 (3%)
Strand=Plus/Plus
Query 109938 TACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAA 109997
|||||| | | | |||||||||| | | || | |||| || || |||||||||||
Sbjct 24985 TACACCTTTACTAACAGGAGAACCTTCGTAAGTGGAATACGGTCCTTCCACCTCGGCCAA 25044
Query 109998 CTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAG 110057
|| | |||||| | || |||| ||||| ||||| ||||| || || | |
Sbjct 25045 TTCACAACTAGCCTCCAAAGCGGCATAATACAACGTCTCGAAAATCTGCAAGTTTAACAT 25104
Query 110058 GCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTG 110117
||||| || || | || | || | | | | |||||| |||| || || |||||
Sbjct 25105 GCGAGCTTCCTCGCTATCATACGGCATTCTCAACAAAATAAAAGCATCGGCAAGGCCCTG 25164
Query 110118 AACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTC---TACGGG 110174
| |||| ||| || || | ||| |||| || || ||| || |||| || ||
Sbjct 25165 TATTCCGATACCGATCGGTCTATGTCTCATATTCGA-CGTTTTGC--TTTCGGGTATCGG 25221
Query 110175 GTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGAT-TTCAT 110233
||| |||| ||| |||| | || | || ||| || | ||||||| ||| |
Sbjct 25222 ATAATAGTTAATGTCTATGATCTTGTTCAAGTTGCGCGTGACGATTTTCGTGACGTTCTT 25281
Query 110234 GGAGTTTGTCGTAATCGAACGTTTTCGTCTCC----TTATTGACATATTTGGGGAGAGCA 110289
||||| ||| ||||| |||| ||| | ||| ||| ||||||| || ||
Sbjct 25282 CAAGTTT-TCGAAATCGTACGTCTTCCTATCCGGTTTTACGAACATATTCACGG----CA 25336
Query 110290 ATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTA 110349
|| ||||| ||||| || || | | | ||||||||| || || || | || || ||
Sbjct 25337 ATCGACGCTAGATTACAAACTGCAATTTCGTCTTTGGACGTATACTCTACGATCTCGGTG 25396
Query 110350 CACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCA 110409
|| |||||| ||| || || |||| ||||| || || ||| ||||| ||
Sbjct 25397 CATAAGTTGCTACTTTTGATCGTTCCCAGGTTCTGTTGGTTGCTTTTACGATTGCAAGCG 25456
Query 110410 TCCTTATAGAGCATGTATGGGGTACCAGTTTCC 110442
||||| ||||||||||| |||||||| ||||||
Sbjct 25457 TCCTTGTAGAGCATGTAAGGGGTACCGGTTTCC 25489
Score = 116 bits (128), Expect = 4e-21
Identities = 230/334 (69%), Gaps = 10/334 (3%)
Strand=Plus/Plus
Query 109501 TTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACAC 109560
|||| ||||||| |||||||||||| |||||||| ||||| || || ||| |
Sbjct 24299 TTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATAATAACC 24358
Query 109561 TTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACG 109620
|| | |||||||| || || ||||| | |||||||||||||| || || ||
Sbjct 24359 TTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGA 24418
Query 109621 ATGTTTTGAATAGAGCCACCAGCCTTCACCATGA---GATCCTTCATCTCTTTCGACCAG 109677
|| || || || || |||| | || | | || ||| |||||| || | ||||
Sbjct 24419 ATATTCTGTATCGAACCACAA---TTGGCGAGGATCTGATTCTTCATGTCGTCGTCCCAG 24475
Query 109678 AGACCGACCTTTTTGAGATCG-TCAACAAGATGCTTGTTGACCACGACAAATTCACCAG- 109735
||| | | | |||||| |||| ||||| | ||| || || ||||| ||||
Sbjct 24476 AGATCTCTATCGGTAAGATCGCGCAAC-AGATGGTGGTTAACGACCTGGAATTCTCCAGA 24534
Query 109736 CAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTA 109795
|||| ||||| | ||||||||| | ||||| ||||| || | || || || ||||
Sbjct 24535 CAAG-ACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTA 24593
Query 109796 GGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGC 109829
|||||| || || |||||||| ||||| || ||
Sbjct 24594 AGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGC 24627
Score = 111 bits (122), Expect = 2e-19
Identities = 229/334 (69%), Gaps = 10/334 (3%)
Strand=Plus/Plus
Query 109501 TTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACAC 109560
|||| ||||||| |||||||||||| |||||||| ||||| || || ||| |
Sbjct 27435 TTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATAATAACC 27494
Query 109561 TTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACG 109620
|| | |||||||| || || ||||| | |||||||||||||| || || ||
Sbjct 27495 TTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGA 27554
Query 109621 ATGTTTTGAATAGAGCCACCAGCCTTCACCATGA---GATCCTTCATCTCTTTCGACCAG 109677
|| || || || || |||| | || | | || ||| |||||| || | ||||
Sbjct 27555 ATATTCTGTATCGAACCACAA---TTGGCGAGGATCTGATTCTTCATGTCGTCGTCCCAG 27611
Query 109678 AGACCGACCTTTTTGAGATCG-TCAACAAGATGCTTGTTGACCACGACAAATTCACCAG- 109735
||| | | | |||||| |||| ||||| | || || || ||||| ||||
Sbjct 27612 AGATCTCTATCGGTAAGATCGCGCAAC-AGATGGTGATTAACGACCTGGAATTCTCCAGA 27670
Query 109736 CAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTA 109795
|||| ||||| | ||||||||| | ||||| ||||| || | || || || ||||
Sbjct 27671 CAAG-ACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTA 27729
Query 109796 GGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGC 109829
|||||| || || |||||||| ||||| || ||
Sbjct 27730 AGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGC 27763
>seq1220
Length=9943
Score = 118 bits (130), Expect = 1e-21
Identities = 345/522 (66%), Gaps = 17/522 (3%)
Strand=Plus/Plus
Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555
|||||||| | ||| | |||||||| || || || | ||||| ||| || ||
Sbjct 7462 GCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTTAGACCC 7521
Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615
||||| |||||||| || || | |||||| || | | ||| ||||| || ||||| ||
Sbjct 7522 GGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAGAAAATT 7581
Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTC----GAA 119671
|| || || |||||||| | || ||||||| | || ||||| ||| | ||
Sbjct 7582 CCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAA-GGTCGCCTCTTTACTGCTGAT 7640
Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA 119731
||| | || |||||||| || || ||| ||| || | |||| || || | |||
Sbjct 7641 CCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCGCATTGAA 7700
Query 119732 ---AAGTTGCTTCT-TTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGG 119787
|| || |||| |||| | || | ||||| | ||||| || | |||
Sbjct 7701 TAAAAATTCTTTCTCTTTCGGG----TCGCTGATATACGTTTCAATAAGCATGCTGTACA 7756
Query 119788 TCTCACCATGAACCATTTCATTGTGTGACT-GATAGGCATAAAATGAGCGAGCTTCGGAA 119846
| || | ||||| | ||| | || | | || | | ||||| | || ||||| |
Sbjct 7757 TTTCGCTATGAATATTCTCAAT-TGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGTT 7815
Query 119847 ATTTGCACTTCGTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCA 119906
| ||| || || | | |||| | | ||||||| ||| |||||||||||| ||
Sbjct 7816 ACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGATGCA 7875
Query 119907 GCGAAGAATGCTAAGATGTACTTTAT-GAATTTCTGTTCATTATCGTTGAGTGTTTTCCA 119965
||||| ||||| |||| ||| || || ||| ||| || | |||| | | | | |||||
Sbjct 7876 GCGAAAAATGCCAAGACGTATTTGATAAAATGTCT-CTCGTCATCGGTTAATTTATTCCA 7934
Query 119966 GTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCA 120007
| || |||||| |||| || || || ||||| | ||||||
Sbjct 7935 ATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCA 7976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588781601109000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |