Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq9764 123 3e-23 seq1220 118 1e-21 >seq9764 Length=88291 Score = 123 bits (136), Expect = 3e-23 Identities = 339/513 (66%), Gaps = 16/513 (3%) Strand=Plus/Plus Query 109938 TACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAA 109997 |||||| | | | |||||||||| | | || | |||| || || ||||||||||| Sbjct 24985 TACACCTTTACTAACAGGAGAACCTTCGTAAGTGGAATACGGTCCTTCCACCTCGGCCAA 25044 Query 109998 CTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAG 110057 || | |||||| | || |||| ||||| ||||| ||||| || || | | Sbjct 25045 TTCACAACTAGCCTCCAAAGCGGCATAATACAACGTCTCGAAAATCTGCAAGTTTAACAT 25104 Query 110058 GCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTG 110117 ||||| || || | || | || | | | | |||||| |||| || || ||||| Sbjct 25105 GCGAGCTTCCTCGCTATCATACGGCATTCTCAACAAAATAAAAGCATCGGCAAGGCCCTG 25164 Query 110118 AACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTC---TACGGG 110174 | |||| ||| || || | ||| |||| || || ||| || |||| || || Sbjct 25165 TATTCCGATACCGATCGGTCTATGTCTCATATTCGA-CGTTTTGC--TTTCGGGTATCGG 25221 Query 110175 GTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGAT-TTCAT 110233 ||| |||| ||| |||| | || | || ||| || | ||||||| ||| | Sbjct 25222 ATAATAGTTAATGTCTATGATCTTGTTCAAGTTGCGCGTGACGATTTTCGTGACGTTCTT 25281 Query 110234 GGAGTTTGTCGTAATCGAACGTTTTCGTCTCC----TTATTGACATATTTGGGGAGAGCA 110289 ||||| ||| ||||| |||| ||| | ||| ||| ||||||| || || Sbjct 25282 CAAGTTT-TCGAAATCGTACGTCTTCCTATCCGGTTTTACGAACATATTCACGG----CA 25336 Query 110290 ATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTA 110349 || ||||| ||||| || || | | | ||||||||| || || || | || || || Sbjct 25337 ATCGACGCTAGATTACAAACTGCAATTTCGTCTTTGGACGTATACTCTACGATCTCGGTG 25396 Query 110350 CACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCA 110409 || |||||| ||| || || |||| ||||| || || ||| ||||| || Sbjct 25397 CATAAGTTGCTACTTTTGATCGTTCCCAGGTTCTGTTGGTTGCTTTTACGATTGCAAGCG 25456 Query 110410 TCCTTATAGAGCATGTATGGGGTACCAGTTTCC 110442 ||||| ||||||||||| |||||||| |||||| Sbjct 25457 TCCTTGTAGAGCATGTAAGGGGTACCGGTTTCC 25489 Score = 116 bits (128), Expect = 4e-21 Identities = 230/334 (69%), Gaps = 10/334 (3%) Strand=Plus/Plus Query 109501 TTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACAC 109560 |||| ||||||| |||||||||||| |||||||| ||||| || || ||| | Sbjct 24299 TTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATAATAACC 24358 Query 109561 TTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACG 109620 || | |||||||| || || ||||| | |||||||||||||| || || || Sbjct 24359 TTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGA 24418 Query 109621 ATGTTTTGAATAGAGCCACCAGCCTTCACCATGA---GATCCTTCATCTCTTTCGACCAG 109677 || || || || || |||| | || | | || ||| |||||| || | |||| Sbjct 24419 ATATTCTGTATCGAACCACAA---TTGGCGAGGATCTGATTCTTCATGTCGTCGTCCCAG 24475 Query 109678 AGACCGACCTTTTTGAGATCG-TCAACAAGATGCTTGTTGACCACGACAAATTCACCAG- 109735 ||| | | | |||||| |||| ||||| | ||| || || ||||| |||| Sbjct 24476 AGATCTCTATCGGTAAGATCGCGCAAC-AGATGGTGGTTAACGACCTGGAATTCTCCAGA 24534 Query 109736 CAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTA 109795 |||| ||||| | ||||||||| | ||||| ||||| || | || || || |||| Sbjct 24535 CAAG-ACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTA 24593 Query 109796 GGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGC 109829 |||||| || || |||||||| ||||| || || Sbjct 24594 AGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGC 24627 Score = 111 bits (122), Expect = 2e-19 Identities = 229/334 (69%), Gaps = 10/334 (3%) Strand=Plus/Plus Query 109501 TTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACAC 109560 |||| ||||||| |||||||||||| |||||||| ||||| || || ||| | Sbjct 27435 TTCAGCGACTGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATAATAACC 27494 Query 109561 TTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACG 109620 || | |||||||| || || ||||| | |||||||||||||| || || || Sbjct 27495 TTATTAGAGATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTATTCCCGGA 27554 Query 109621 ATGTTTTGAATAGAGCCACCAGCCTTCACCATGA---GATCCTTCATCTCTTTCGACCAG 109677 || || || || || |||| | || | | || ||| |||||| || | |||| Sbjct 27555 ATATTCTGTATCGAACCACAA---TTGGCGAGGATCTGATTCTTCATGTCGTCGTCCCAG 27611 Query 109678 AGACCGACCTTTTTGAGATCG-TCAACAAGATGCTTGTTGACCACGACAAATTCACCAG- 109735 ||| | | | |||||| |||| ||||| | || || || ||||| |||| Sbjct 27612 AGATCTCTATCGGTAAGATCGCGCAAC-AGATGGTGATTAACGACCTGGAATTCTCCAGA 27670 Query 109736 CAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTA 109795 |||| ||||| | ||||||||| | ||||| ||||| || | || || || |||| Sbjct 27671 CAAG-ACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTA 27729 Query 109796 GGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGC 109829 |||||| || || |||||||| ||||| || || Sbjct 27730 AGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGC 27763 >seq1220 Length=9943 Score = 118 bits (130), Expect = 1e-21 Identities = 345/522 (66%), Gaps = 17/522 (3%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 |||||||| | ||| | |||||||| || || || | ||||| ||| || || Sbjct 7462 GCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTTAGACCC 7521 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 ||||| |||||||| || || | |||||| || | | ||| ||||| || ||||| || Sbjct 7522 GGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAGAAAATT 7581 Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTC----GAA 119671 || || || |||||||| | || ||||||| | || ||||| ||| | || Sbjct 7582 CCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAA-GGTCGCCTCTTTACTGCTGAT 7640 Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA 119731 ||| | || |||||||| || || ||| ||| || | |||| || || | ||| Sbjct 7641 CCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCGCATTGAA 7700 Query 119732 ---AAGTTGCTTCT-TTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGG 119787 || || |||| |||| | || | ||||| | ||||| || | ||| Sbjct 7701 TAAAAATTCTTTCTCTTTCGGG----TCGCTGATATACGTTTCAATAAGCATGCTGTACA 7756 Query 119788 TCTCACCATGAACCATTTCATTGTGTGACT-GATAGGCATAAAATGAGCGAGCTTCGGAA 119846 | || | ||||| | ||| | || | | || | | ||||| | || ||||| | Sbjct 7757 TTTCGCTATGAATATTCTCAAT-TGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGTT 7815 Query 119847 ATTTGCACTTCGTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCA 119906 | ||| || || | | |||| | | ||||||| ||| |||||||||||| || Sbjct 7816 ACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGATGCA 7875 Query 119907 GCGAAGAATGCTAAGATGTACTTTAT-GAATTTCTGTTCATTATCGTTGAGTGTTTTCCA 119965 ||||| ||||| |||| ||| || || ||| ||| || | |||| | | | | ||||| Sbjct 7876 GCGAAAAATGCCAAGACGTATTTGATAAAATGTCT-CTCGTCATCGGTTAATTTATTCCA 7934 Query 119966 GTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCA 120007 | || |||||| |||| || || || ||||| | |||||| Sbjct 7935 ATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCA 7976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588781601109000