Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq22791 87.8 2e-12 >seq22791 Length=128134 Score = 87.8 bits (96), Expect = 2e-12 Identities = 165/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 158458 CCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTA--TAAGA 158515 ||| | || |||||||| || ||||||| |||||| || | | | || ||||| Sbjct 15872 CCTTTAGGTTACGGAGGCCCACATGCTGGATTCTTCGCTTGTAAACAAGCGTTGGTAAGA 15931 Query 158516 GAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATA-GCGAA-GGTAATAAAGCATA 158573 || | ||||||||||| | ||| |||| ||| | ||| ||| | || || Sbjct 15932 TTAA--TGCCTGGCAGAATGATTGGT--GTCACTAGGGATGCGGCTGGTCGGGACGCTTA 15987 Query 158574 CAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACAT 158633 | | ||||| || ||||||||||||||||| || | ||||| ||||| || || || Sbjct 15988 TCGTCTTGCACTTCAAACTAGAGAGCAGCATATAAGGCGCGACAAGGCAACTAGCAATAT 16047 Query 158634 CTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGG 158690 || ||||| ||||| || ||||| |||||||| | | | ||| | |||| |||| Sbjct 16048 TTGTACAGCGCAAGCTCTACTGGCGAATATGTCGGCTATGTTTGCTGTATATTATGG 16104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587857106350800