Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq9911 159 8e-34 seq22504 134 3e-26 >seq9911 Length=12084 Score = 159 bits (176), Expect = 8e-34 Identities = 169/223 (76%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | || ||| || | ||| || || || |||||||| ||||| ||||| | ||| || Sbjct 4357 TCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGAAAGCGT 4416 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||| || | || || || || || || | ||||| ||||||||||| || || Sbjct 4417 GCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACC 4476 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||| |||||| || ||||| |||||||||||||| ||||||||| | Sbjct 4477 TTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAA 4536 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| || ||||| || | ||||||||| || | ||||||| Sbjct 4537 TGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCATT 4579 Score = 154 bits (170), Expect = 3e-32 Identities = 168/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| || || | ||||| ||||||||||| |||||||||||||| | ||||| Sbjct 5989 TCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGATAGAGT 6048 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | ||||| || || ||||| | ||| ||||| ||||| ||||| || Sbjct 6049 GCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGGGAATACC 6108 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| || || || || || ||||| |||||||| ||| ||||||||| | Sbjct 6109 TTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCCACTTCCAA 6168 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| || || || || ||||| || || || | |||||| Sbjct 6169 TGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATT 6211 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || ||||||||||| || || ||||||||||||||||| | ||||| | |||||| Sbjct 4823 AATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCT 4882 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || | ||||| || || || || | |||||||| || ||||| || ||||| |||||| Sbjct 4883 TCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCT 4942 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 ||||| ||| || || || || ||||| || | |||||||||||| |||| ||| Sbjct 4943 TGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCCACTTCAAGTGTAATAGTC 5002 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || |||||||| || || | ||||| Sbjct 5003 TTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 145 bits (160), Expect = 2e-29 Identities = 166/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || |||||||| ||||| ||||| || ||||| | | ||| Sbjct 4585 TCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGATAAAGT 4644 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | ||| ||||| || || || | || ||||| |||||||| || || Sbjct 4645 ACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGTATTCC 4704 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||| || || ||| | ||||| || || || ||| ||||||||| | Sbjct 4705 TTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCACTTCCAA 4764 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| |||||||| || | |||||| || || | ||||||| Sbjct 4765 TGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| || || ||||| |||||||| || | | || | |||||||| | ||| Sbjct 5516 TGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGACAATGTACGGCCATCTTCCAATTGC 5575 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | |||||||||||||| || |||||||| ||||||||||||||| Sbjct 5576 TTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTT 5635 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || ||||| ||||| || || || || ||||| | |||| || ||||| ||| Sbjct 5636 GCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGTC 5695 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 || |||||||| || | |||||| Sbjct 5696 AAGGTTTTTACAAAAATTTGCAT 5718 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || ||||||||||| || || ||||| | |||||| | |||||||| | || Sbjct 5288 TGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACGTCCATCTTCCAATTGT 5347 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || ||||| | |||||||||||||| || || |||||||| |||||||||||| Sbjct 5348 TTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTTT 5407 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || || ||||| || || || |||||||| | |||| |||||| || || Sbjct 5408 GCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGTAATCGTCTTCCCAGTT 5467 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | ||||| Sbjct 5468 AATGTCTTGACGAATATCTGCAT 5490 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| || || ||||| ||||| || || | | |||| |||||||| | ||| Sbjct 5780 TGGAGAGTAGATTCCTTTTGGATATTATAGTCAGACAATGTTCGGCCATCTTCCAATTGC 5839 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | |||||||||||||| || |||||||| ||||||||||||||| Sbjct 5840 TTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTT 5899 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || ||||| ||||| || || || || ||||| | |||| || ||||| ||| Sbjct 5900 GCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCCAGTC 5959 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || | |||||| Sbjct 5960 AAGGTTTTCACAAAAATTTGCAT 5982 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || || || ||||||||||||||||| | |||||||| ||||||||| | || Sbjct 4148 TGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGTTCGCCCATCTTCCAATTGT 4207 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || ||||| ||||| | || || || ||||||||||| |||||||| || |||||||| Sbjct 4208 TTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTATCCTGAATTTTA 4267 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || ||||| ||||| || || ||| ||| ||||| | || | || || || || Sbjct 4268 GCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTGATAGTTTTCCCAGTA 4327 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || || || | |||||| Sbjct 4328 AGGGTCTTAACAAATATTTGCAT 4350 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || || || ||||| || || ||||| | ||| || | |||||||| | || Sbjct 5060 TGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACGACCATCTTCTAATTGT 5119 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| ||||| || ||||||||||| || || ||||| |||||||| || || || || Sbjct 5120 TTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTCTTTATCCTGGATCTTA 5179 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || || |||||||| || || ||| ||||| | || | |||||||| || Sbjct 5180 GCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGTGATGGTCTTTCCAGTT 5239 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 |||||||| || || | |||||| Sbjct 5240 AAAGTTTTAACAAAAATTTGCAT 5262 >seq22504 Length=90246 Score = 134 bits (148), Expect = 3e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||| | |||||| || || || ||||| ||||| | ||||| | || || Sbjct 25744 CAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAATCCGATAGAGTACGACCGTC 25685 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||| ||||| ||||| ||||| ||||| || || || || || ||||| ||||| Sbjct 25684 TTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTC 25625 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||||||| ||| || || || || || || ||| ||| || || ||||| | || Sbjct 25624 TTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGT 25565 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || ||||| | ||||| ||||| | ||||||| Sbjct 25564 TTTCCCTGTAAGTGTTTTCACGAAAATTTGCATT 25531 Score = 120 bits (132), Expect = 7e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||| | ||||| ||||| |||||||| ||||| | ||||| | || || Sbjct 21199 CAATACCAAGTGTAAGGTGGATTCTTTCTGAATATTATAATCCGATAGAGTACGACCGTC 21140 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||| ||||| ||||| ||||| ||||| || || || || || ||||| ||||| Sbjct 21139 TTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTC 21080 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||||||| ||| || || || || || || ||| ||| || || ||||| | || Sbjct 21079 TTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGT 21020 Query 195108 CTTTCCTGT 195116 || ||||| Sbjct 21019 TTTCCCTGT 21011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109106246772635