Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq22639 122 1e-22 >seq22639 Length=125898 Score = 122 bits (134), Expect = 1e-22 Identities = 253/368 (69%), Gaps = 13/368 (4%) Strand=Plus/Minus Query 104931 TATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTTTCGAAAAG 104990 ||||||| | ||| || | ||| | || ||||||||| ||| || | | || ||| Sbjct 12898 TATGGAAAGCAAATAGTACTCGTGATTTCTTAGATTCTGTTGGTTTAATCGATAGAGAAG 12839 Query 104991 AAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATCG 105050 |||||||| ||||||||||||| || ||||||||| | ||| ||| ||| | |||| | Sbjct 12838 AAGGTGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTATA-CA 12780 Query 105051 ACTGTG-ATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACT 105109 | | || || |||| ||||| || ||||| || || | |||| ||| | || Sbjct 12779 AATATGCATGCCGATTATACTAATAGGGGGATAGATCAGTTGATGGAAGTGATAAATACA 12720 Query 105110 ATAAAAAAT-AACCCCGGGTGTCGAAGAATAATTATAGATAGTTGGAAT---GTGTCACA 105165 |||| ||| ||| | | | || | || ||||| | |||||| || | | | Sbjct 12719 ATAAGGAATCGACCGCATG-ATAGACGCATCATTATGTGTGCATGGAATCCAGT-TGATA 12662 Query 105166 ATTATCAGATATGGCTCTTCCACCGTGTCATTGTTTGGTACAATTTTACATTAGAAATAA 105225 || | | |||||||||||||| || ||||| ||||||||||||| || ||||| Sbjct 12661 --TACCTAAAATGGCTCTTCCACCTTGCCATTGCTTGGTACAATTTTTTGTTGCGAATAA 12604 Query 105226 AATTTATTTAGATTGTCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATA 105285 | ||| ||| | || |||||||||||||| ||| | || | || ||||| | Sbjct 12603 ---CGAGTTATCTTGCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTT 12547 Query 105286 TAATATTG 105293 |||||||| Sbjct 12546 TAATATTG 12539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658185885793800