Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq22639 122 1e-22
>seq22639
Length=125898
Score = 122 bits (134), Expect = 1e-22
Identities = 253/368 (69%), Gaps = 13/368 (4%)
Strand=Plus/Minus
Query 104931 TATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTTTCGAAAAG 104990
||||||| | ||| || | ||| | || ||||||||| ||| || | | || |||
Sbjct 12898 TATGGAAAGCAAATAGTACTCGTGATTTCTTAGATTCTGTTGGTTTAATCGATAGAGAAG 12839
Query 104991 AAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATCG 105050
|||||||| ||||||||||||| || ||||||||| | ||| ||| ||| | |||| |
Sbjct 12838 AAGGTGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTATA-CA 12780
Query 105051 ACTGTG-ATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACT 105109
| | || || |||| ||||| || ||||| || || | |||| ||| | ||
Sbjct 12779 AATATGCATGCCGATTATACTAATAGGGGGATAGATCAGTTGATGGAAGTGATAAATACA 12720
Query 105110 ATAAAAAAT-AACCCCGGGTGTCGAAGAATAATTATAGATAGTTGGAAT---GTGTCACA 105165
|||| ||| ||| | | | || | || ||||| | |||||| || | | |
Sbjct 12719 ATAAGGAATCGACCGCATG-ATAGACGCATCATTATGTGTGCATGGAATCCAGT-TGATA 12662
Query 105166 ATTATCAGATATGGCTCTTCCACCGTGTCATTGTTTGGTACAATTTTACATTAGAAATAA 105225
|| | | |||||||||||||| || ||||| ||||||||||||| || |||||
Sbjct 12661 --TACCTAAAATGGCTCTTCCACCTTGCCATTGCTTGGTACAATTTTTTGTTGCGAATAA 12604
Query 105226 AATTTATTTAGATTGTCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATA 105285
| ||| ||| | || |||||||||||||| ||| | || | || ||||| |
Sbjct 12603 ---CGAGTTATCTTGCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTT 12547
Query 105286 TAATATTG 105293
||||||||
Sbjct 12546 TAATATTG 12539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658185885793800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |