Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 441 8e-119
seq9764 123 3e-23
>seq1220
Length=9943
Score = 441 bits (488), Expect = 8e-119
Identities = 651/919 (71%), Gaps = 10/919 (1%)
Strand=Plus/Plus
Query 18661 ACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAAT 18720
|| || | |||||| ||||| ||||| |||||||||| || |||||||| |||||
Sbjct 7159 ACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCGTG 7218
Query 18721 GATAT-ACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAA 18779
||||| | |||| ||||||||||||||||| || |||||| | ||||| | ||||
Sbjct 7219 GATATGATATTC-ATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTAG 7277
Query 18780 TTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCAT 18839
||| | || ||| || || ||||||| |||||| |||| | || |||||
Sbjct 7278 TTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCAT 7337
Query 18840 TCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTC 18899
||||||||| ||||||| | ||||| |||||||| ||||| || || | || || ||
Sbjct 7338 TCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGTC 7397
Query 18900 TGATATAATAGATACAACTCTATCTTCATTAGGAGGGTAT----AGAAGATGTTTAAACA 18955
| |||||| || | || | ||| || ||| | | || || ||| |
Sbjct 7398 GCAAATAATATCGACGATTCGAG----ATTTCGACGGTTTTTGTACAATATAAGAAAATA 7453
Query 18956 TCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATG 19015
|| || ||||| ||| |||| | ||| || || | ||| |||||||| || || |
Sbjct 7454 ATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAG 7513
Query 19016 TTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAA 19075
||| ||| ||||| |||||||| ||||| ||||| || || |||||||| ||| || |
Sbjct 7514 TTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGA 7573
Query 19076 AGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTAT 19135
|||| || ||||| ||||| || ||||| |||| | || || | | || || |||
Sbjct 7574 AGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTAC 7633
Query 19136 TATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAG 19195
| ||||||| ||| ||||| | ||| || || ||| || || | ||| ||||| |
Sbjct 7634 TGCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCG 7693
Query 19196 AATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGT 19255
||| |||| | | ||| | | || | | ||| | || || | | ||||
Sbjct 7694 CATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGT 7753
Query 19256 ACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTG 19315
||||||| ||||||||| || || || || ||||| ||||||||||| | ||||| |
Sbjct 7754 ACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAG 7813
Query 19316 TTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAG 19375
||| || || || || ||| | ||| |||| |||||||||||| |||||||| |
Sbjct 7814 TTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGATG 7873
Query 19376 CTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCC 19435
| || |||||||| || || | ||| ||||||||| | || || ||||||| ||||||
Sbjct 7874 CAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTCC 7933
Query 19436 AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTT 19495
||| || |||||| ||||||||||||||||||| ||||||||| || || || ||||
Sbjct 7934 AATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCTT 7993
Query 19496 TTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTAT 19555
||| || | ||| ||||| |||||| ||| || || | |||||||| || ||
Sbjct 7994 GTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGGAT 8053
Query 19556 TTTCTTTAAGAATAGGTTC 19574
|||||||||||| |||||
Sbjct 8054 TTTCTTTAAGAAGTGGTTC 8072
>seq9764
Length=88291
Score = 123 bits (136), Expect = 3e-23
Identities = 185/260 (71%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270
||||||| | || ||||||||||| || ||| |||||||||| | ||||||
Sbjct 25826 TCATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGCGCTTCTTCGA 25885
Query 48271 TGCCACTATTCCT-TTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAA 48329
|||| ||||| | || || ||||||||| |||| ||||| || ||||| || || ||
Sbjct 25886 TGCCGGTATTCTTCTTCAAATTCAAGAAA-TCCAAGATATCGGCGTGCCAGGGCTCCAAG 25944
Query 48330 TATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTG 48389
|| || || | | || || | || || || |||||||| | || | || |||||
Sbjct 25945 TAAATGGCGAAAGCTCCCGGCCTCTTGTTTCCACCTTGATCAACGTAACGCGCCGTATTA 26004
Query 48390 TTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAA 48449
|| |||| |||| ||| || || | ||| || |||| || || || || | |||||||
Sbjct 26005 TTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCGGCAATATAA 26064
Query 48450 CTTCCACTAGCTCTTATATT 48469
|||| | |||||||||||
Sbjct 26065 GTTCCTTTCGCTCTTATATT 26084
Score = 111 bits (122), Expect = 2e-19
Identities = 356/551 (65%), Gaps = 19/551 (3%)
Strand=Plus/Plus
Query 47004 GCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAA 47063
|||| ||| |||| || ||||||||| || ||||| |||||| |||| || ||||||
Sbjct 27330 GCTGGTTTCGTTCTTAGATAATACATTCCCGTCTTCAAACCTTTCTTCCACCCGTAGAAA 27389
Query 47064 TGCATACTAGTTAATTTAGAA-----TAACTAGG-TTCTGAAATATGAATATTAAGAGAT 47117
|| || | | ||| ||| |||||||| |||| | || | ||| || ||
Sbjct 27390 TGGAT-CGATGTAA----GAACGCCGTAACTAGGCTTCTCGACG-TGTAGATTCAGCGAC 27443
Query 47118 TGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGT 47177
||||||||||| || || || || | ||| || || | | ||||||| | | |
Sbjct 27444 TGACTCTGATCGATGAAAGCGCCACGATCGGCCGCTTGGTTAATAATAACCTTATTAGAG 27503
Query 47178 ATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATT-----AGTATTTT 47232
|| |||||||| ||||| || || | || || || || || | || | |||| |
Sbjct 27504 ATTTCCCATACGGTTTTGTAGATCTTCTTGATATCATCCGGTA--TTCCCGGAATATTCT 27561
Query 47233 GAATAGATCCTCCgttttctataattttgttttttaattcatttgaccaaagttttcgtt 47292
| || || || | || | | || | || || | || | ||| || | || |
Sbjct 27562 GTATCGAACCACAATTGGCGAGGATCTGATTCTTCATGTCGTCGTCCCAGAGATCTCTAT 27621
Query 47293 cagttaatgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTAC 47352
| || | || ||||| ||||||| | || ||||||||||| | || | |
Sbjct 27622 CGGTAAGATCGCGCAACAGATGGTGATTAACGACCTGGAATTCTCCAGACAAGACGCGTC 27681
Query 47353 GGCTATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAG 47412
| | || || || || || ||||| | ||||| |||||||| || |||||||| |
Sbjct 27682 TGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCGTTATTTCCTAAGATTTGAGCCG 27741
Query 47413 TTGATGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCT 47472
| || ||||| ||||| | ||| | | ||| ||||||||| |||| ||| ||||
Sbjct 27742 TCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTTCTTACACCATGTTTAGCGATCT 27801
Query 47473 NNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATT 47532
|||||||||| ||||||| ||| || ||||| | ||| ||||
Sbjct 27802 TCGCTTTTAATGCGCTCCAATCCCATAGATCTGTTGGCGTTACGTTCCACATATCGTATT 27861
Query 47533 GAAGAATTCCT 47543
| | ||| |||
Sbjct 27862 GTAAAATACCT 27872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561923268964200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |