Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1220 289 3e-73 >seq1220 Length=9943 Score = 289 bits (320), Expect = 3e-73 Identities = 620/916 (68%), Gaps = 14/916 (2%) Strand=Plus/Plus Query 36874 TAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTA 36933 |||| || | |||||| |||||||||||| | |||| ||||| || || || || || Sbjct 7157 TAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCG 7216 Query 36934 GTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATA 36993 ||||| | | |||||||||||||||||| || |||||| | | ||| || Sbjct 7217 TGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTA 7276 Query 36994 ATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTA 37053 ||| |||| | || || || |||||||| || || | || ||| || |||| | Sbjct 7277 GTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCA 7336 Query 37054 TACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCAT 37113 | || |||| | || || | ||||| |||||| || || ||| || || | Sbjct 7337 TTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGT 7396 Query 37114 CTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTT-TA-AATATTT--AAAC 37169 | || |||| || || || | || | | | ||| || ||||| ||| Sbjct 7397 CGCAAATAATATCGACGAT----TCGAGATTTCGACGGTTTTTGTACAATATAAGAAAAT 7452 Query 37170 AATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAG 37229 ||||| || ||||| ||| |||| || |||||||| | ||| |||||||| || || Sbjct 7453 AATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAA 7512 Query 37230 GTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAA 37289 |||| || ||||| | ||||| ||||| | |||||| |||| ||||| ||| || Sbjct 7513 GTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAG 7572 Query 37290 AAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA-CTATA 37348 |||||||| ||||| ||||| || || ||||| | ||| |||||| || | || || Sbjct 7573 AAGAAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTA 7632 Query 37349 AT-CAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAA 37407 | | || |||||| | ||| | || ||| || || | |||||| | Sbjct 7633 CTGCTGA--TCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTA 7690 Query 37408 TTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAAC 37467 | || || || | ||| | ||| |||| || | ||||| || ||||| || | | Sbjct 7691 TCGCATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGC 7750 Query 37468 TATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTT 37527 | |||||||| |||||||| ||||| || || |||||||| |||||||||| |||| Sbjct 7751 TGTACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTT 7810 Query 37528 CAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCAC 37587 ||| || |||||| || | | ||| | | | | ||||||||||| || ||||| Sbjct 7811 CAGTTACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGG 7870 Query 37588 TAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTT 37647 || || || || || | || ||||| ||||||||||| || |||| | |||||| | Sbjct 7871 ATGCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTAT 7930 Query 37648 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATG 37707 |||||| || |||||| | |||||||| ||||| || |||||||| || | Sbjct 7931 TCCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGG 7990 Query 37708 CACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATC-TATCA 37766 | |||| || | | ||||||||| || || |||||| || | ||||||| | | Sbjct 7991 CTTGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGG 8050 Query 37767 GATGATTCTTTAAGAA 37782 ||| ||||||||||| Sbjct 8051 GAT-TTTCTTTAAGAA 8065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592121298436200