Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 138 1e-27
>seq9911
Length=12084
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| ||||| ||||| | ||||| || |||||||| ||| |||||||||
Sbjct 4807 AATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTC 4748
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || ||| || ||| |||||||| ||| | || ||||||
Sbjct 4747 TGATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCA 4688
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|||| | | || ||||| || ||||| ||||||||| | ||| | | ||||||||
Sbjct 4687 ACAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAA 4628
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||||| |||||||| ||||| || ||||||| |||||| ||||||| ||
Sbjct 4627 CATTCAGAAAGAATCCACTCTACATTTGGTATTGAGATTAAGAGGAGGAAT 4577
Score = 132 bits (146), Expect = 4e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||| || ||||| || || ||||| |||||||| ||||| ||| |||||||||
Sbjct 6211 AATGCAGATCTTTGTGAAGACTTTAACTGGTAAAACAATTACATTGGAAGTGGAACCTTC 6152
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
||| || | | || | || || ||| |||||||| || | ||| ||||||
Sbjct 6151 AGACACCATCGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCA 6092
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|||| || | |||||||| ||||| |||||||||||| | ||| | | ||||| ||
Sbjct 6091 ACAGCGATTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACTCTATCTGATTACAA 6032
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| ||||| || || || || |||| |||||||| ||||||| ||
Sbjct 6031 TATTCAGAAAGAGTCCACACTTCATTTGGTGTTAAGATTGAGAGGAGGTAT 5981
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || ||||| ||||| ||||| ||||| || ||||| ||| |||||| |
Sbjct 5034 ATGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAACCAGCT 4975
Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | || ||||| | || ||||| || ||| | || |||||
Sbjct 4974 GATACCATAGAAAATGTGAAAGCAAAGATTCAA-GACAAGGAAGGAATCCCTCCCGATCA 4916
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| | | || ||||| ||||| |||||||||||| | ||| | | ||||| ||
Sbjct 4915 ACAACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAA 4856
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||||||| ||||| ||||| ||| |||||||| | || ||||||| ||
Sbjct 4855 TATTCAAAAGGAATCAACTCTTCACCTGGTATTACGGTTGAGAGGAGGAAT 4805
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| ||||| || || |||||||| || || || ||||| ||| ||| || ||
Sbjct 5490 ATGCAGATATTCGTCAAGACATTAACTGGGAAGACGATTACTTTGGAAGTGGAGCCATCT 5431
Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | || ||||||| || || ||||| || | || ||| ||
Sbjct 5430 GATACTATTGAAAATGTAAAAGCAAAAATTCAA-GATAAAGAAGGTATCCCACCAGACCA 5372
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| | | |||||||| || ||||||||||||||| ||| | | ||||||||
Sbjct 5371 ACAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAA 5312
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||| |||||||| || || || || |||||||| |||| |||| || ||
Sbjct 5311 CATCCAAAAAGAGTCGACCCTCCATTTGGTATTACGATTGAGAGGTGGTAT 5261
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| ||||||||||| | || || ||||| ||||| ||| |||||| ||
Sbjct 4579 AATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAACCATC 4520
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | | | || ||||||| |||||||| || | || ||| ||
Sbjct 4519 GGACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACCA 4460
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|| | | || ||||| || ||||||||||| ||| || | | ||||||||
Sbjct 4459 GCAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCAGATTATAA 4400
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| |||||||||||||| |||||| | || || |||| ||||||| ||
Sbjct 4399 TATCCAAAAAGAATCTACACTGCACTTAGTCTTGCGATTGAGAGGAGGTAT 4349
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||||||||| || || | || || ||||| || || ||| |||||||||
Sbjct 4350 ATGCAAATATTTGTTAAGACCCTTACTGGGAAAACTATCACATTGGAAGTAGAACCTTCA 4291
Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | | | || || |||| || || ||||| || | || ||||||
Sbjct 4290 GATACAATTGAAAACGTTAAAGCTAAAATTCAG-GATAAAGAAGGTATTCCTCCAGATCA 4232
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| | | |||||||| || ||||||||||||||| |||| | | ||||| ||
Sbjct 4231 GCAGCGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGGCGAACTCTTTCAGATTACAA 4172
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|||||||| |||||||| || || ||||| | | ||||| || ||
Sbjct 4171 TATTCAAAAGGAATCTACCCTACATTTGGTACTTCGCTTACGTGGGGG 4124
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| ||||| ||||| || || ||||| || ||| ||||| ||
Sbjct 5262 ATGCAAATTTTTGTTAAAACTTTAACTGGAAAGACCATCACTTTAGAAGTTGAACCATCT 5203
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | || || ||| || ||||| || | || ||||||
Sbjct 5202 GATACCATTGAAAATGTAAAAGCTAAGATCCAGGATAAAGAAGGTATTCCACCTGATCAA 5143
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| |||| || || || || |||||||| |||||| | || | | |||||||||
Sbjct 5142 CAACGACTAATATTCGCTGGTAAACAATTAGAAGATGGTCGTACCCTTTCAGATTATAAC 5083
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATT 28771
|| ||||| |||||||| || || | |||||| ||||
Sbjct 5082 ATCCAAAAGGAATCTACCCTTCATTTAGTATTACGATT 5045
Score = 86.0 bits (94), Expect = 5e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| ||||| || || || ||||||||||| ||| || || ||
Sbjct 5982 ATGCAAATTTTTGTGAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5923
Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | | | || ||||||| || ||||| || || | || ||| ||
Sbjct 5922 GATACAATTGAAAACGTAAAAGCAAAAATTCAA-GACAAGGAAGGCATCCCACCAGACCA 5864
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| | | ||||| || ||||| |||||||||||| ||| || | || |||||
Sbjct 5863 ACAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACATTGTCTGACTATAA 5804
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| ||||||||||| || |||| | | ||| |||| || ||
Sbjct 5803 TATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGGTAT 5753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425267900082495
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |