Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq9764 114 7e-21
>seq9764
Length=88291
Score = 114 bits (126), Expect = 7e-21
Identities = 207/299 (69%), Gaps = 4/299 (1%)
Strand=Plus/Plus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||| || || || ||||| | |||||||| ||||| || || | | |||||| |
Sbjct 25827 CATAAACAAGTCGGGTATCCAAAGGGCATAAAACAAATCCCTAGCACGCGCTTCTTCGAT 25886
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
||| |||||| || | || |||||||| || ||||| | |||||| || || || ||
Sbjct 25887 GCCGGTATTCTTCTTCAAATTCAAGAAATCCAAGATATCGGCGTGCCAGGGCTCCAAGTA 25946
Query 26053 GATAGCAAAA-CTACCTTT-TCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCA 26110
|| || ||| || || |||| || |||||||||||| ||||| | || || | |
Sbjct 25947 AATGGCGAAAGCTCCCGGCCTCTTGTT--TCCACCTTGATCAACGTAACGCGCCGTATTA 26004
Query 26111 TTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTG 26170
|||||||| | | ||| || || || || | || | ||||| |||| ||| |
Sbjct 26005 TTGAAAACCCTTAGCATCGGCACCAAACCGTTGGATACGCCGTTCGTGCCGGCAATATAA 26064
Query 26171 GATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229
| |||| ||| ||| |||| ||| | | | ||||| || || || | || |||||
Sbjct 26065 GTTCCTTTCGCTCTTATATTGTGCACGTTTACGCCGATACCGCCGGCTGACTTCGAAAT 26123
Score = 109 bits (120), Expect = 3e-19
Identities = 116/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075
|||||||||||||| || | ||| | | | ||| |||||| | |||||||| ||||
Sbjct 24524 AATTCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCG 24583
Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135
||||||||||||||||||| || || ||||| ||||| ||||| | || ||||||
Sbjct 24584 TTATTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTT 24643
Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAAT 25168
|| | ||||| |||| | |||| |||||||
Sbjct 24644 CTTACACCATGTTTAGCGATCTTCGCTTTTAAT 24676
Score = 109 bits (120), Expect = 3e-19
Identities = 116/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075
|||||||||||||| || | ||| | | | ||| |||||| | |||||||| ||||
Sbjct 27660 AATTCTCCAGACAAGACGCGTCTGGTGTAGATGTTCGAAGTGTACGGTTCAAAGGATTCG 27719
Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135
||||||||||||||||||| || || ||||| ||||| ||||| | || ||||||
Sbjct 27720 TTATTTCCTAAGATTTGAGCCGTCGAAGCTGTCGGCATAGGTGCTAGAAGTAAAGAATTT 27779
Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAAT 25168
|| | ||||| |||| | |||| |||||||
Sbjct 27780 CTTACACCATGTTTAGCGATCTTCGCTTTTAAT 27812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252958568960375
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |