Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 152 9e-32
>seq9911
Length=12084
Score = 152 bits (168), Expect = 9e-32
Identities = 176/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| ||||| ||||||||||| | || | |||| ||||| ||||| ||||||
Sbjct 4343 ATTTGCATACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTA 4402
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|| || || | ||| | ||| || |||||||| ||||||||||| || | || ||
Sbjct 4403 TAATCTGAAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGG 4462
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| |||||||| |||||||| ||||| ||||| | ||| | ||| ||| || || ||
Sbjct 4463 TCTGGAGGTATACCTTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGAT 4522
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
| || ||||||| || || ||||| || || || ||||||||||| |||||||||
Sbjct 4523 GGTTCCACTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCATT 4579
Score = 149 bits (164), Expect = 1e-30
Identities = 175/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| || || ||||| |||| | ||||| ||| | || | ||||| ||| |||
Sbjct 4571 ATTTGCATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTA 4630
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|| || ||||| || | | ||| || || ||||| || ||||||||||| | |||||||
Sbjct 4631 TAATCAGATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGA 4690
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| ||||||||||||||||| ||||| || || | ||| ||| |||||||| |||
Sbjct 4691 TCTGGAGGTATTCCTTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAA 4750
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
| || ||||| | || || || || || || || ||||| ||||| |||||||||
Sbjct 4751 GGTTCCACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| |||||||| | ||| | ||| | |||| || || || ||||| ||
Sbjct 5033 ATACCACCCCTCAATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCT 5092
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | | ||| ||||||||||| || || || |||| || |||||||||||
Sbjct 5093 GAAAGGGTACGACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGT 5152
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||||||||| || || || | ||||| |||| ||| ||||| || | |||
Sbjct 5153 GGAATACCTTCTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCA 5212
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||||| ||| || || || || |||| ||||| ||||| ||||||||
Sbjct 5213 ACTTCTAAAGTGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262
Score = 149 bits (164), Expect = 1e-30
Identities = 175/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| ||||||||||||||||| | ||||| ||| | || | |||||| || ||
Sbjct 5254 AATTTGCATACCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTT 5313
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||| || || | || | ||| || |||||||| || ||||| || || | |||||
Sbjct 5314 ATAATCAGAAAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTG 5373
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
|| || || || |||||||||||||| ||||| | ||||| |||| ||||||||| ||
Sbjct 5374 GTCTGGTGGGATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATCAGA 5433
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||| ||||| | ||| || || || || |||| || || || ||||| |||||
Sbjct 5434 TGGCTCCACTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490
Score = 145 bits (160), Expect = 1e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || ||||| |||| ||| | |||| || || |||||||||||
Sbjct 5753 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCA 5812
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || |||| ||| || ||||| || || || || ||||| | ||||| || ||
Sbjct 5813 GACAATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5872
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| ||||| | ||||| ||| ||| |||||||| | ||||
Sbjct 5873 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5932
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | || || ||||| || || | ||||| ||||| ||||||||
Sbjct 5933 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 193143 AATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTA 193202
|| |||||||||| ||| | |||| || || |||||| || || || | ||||
Sbjct 4133 AAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGTTCGC 4192
Query 193203 GAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCT 193262
||| || ||||||||||| ||||| || || | ||| ||||| ||||| || ||||||
Sbjct 4193 CCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCT 4252
Query 193263 TTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTT 193322
||||| || ||||| | ||| | ||| ||| ||||| |||| || ||||| | ||
Sbjct 4253 TTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTG 4312
Query 193323 ATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| || || || || || ||||||||||||||
Sbjct 4313 ATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || ||||| |||| ||| | |||| || || ||||| |||||
Sbjct 5489 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCA 5548
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| || || | ||| || ||||| || || || || ||||| | ||||| || ||
Sbjct 5549 GACAATGTACGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5608
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| ||||| | ||||| ||| ||| |||||||| | ||||
Sbjct 5609 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5668
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | || || ||||| || || | ||||||||||| ||||||||
Sbjct 5669 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899357457819600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |