Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq9911 152 9e-32 >seq9911 Length=12084 Score = 152 bits (168), Expect = 9e-32 Identities = 176/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| ||||||||||| | || | |||| ||||| ||||| |||||| Sbjct 4343 ATTTGCATACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTA 4402 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | ||| | ||| || |||||||| ||||||||||| || | || || Sbjct 4403 TAATCTGAAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGG 4462 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || |||||||| |||||||| ||||| ||||| | ||| | ||| ||| || || || Sbjct 4463 TCTGGAGGTATACCTTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGAT 4522 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || ||||||| || || ||||| || || || ||||||||||| ||||||||| Sbjct 4523 GGTTCCACTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCATT 4579 Score = 149 bits (164), Expect = 1e-30 Identities = 175/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || || ||||| |||| | ||||| ||| | || | ||||| ||| ||| Sbjct 4571 ATTTGCATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTA 4630 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || ||||| || | | ||| || || ||||| || ||||||||||| | ||||||| Sbjct 4631 TAATCAGATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGA 4690 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||||||||||||||| ||||| || || | ||| ||| |||||||| ||| Sbjct 4691 TCTGGAGGTATTCCTTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAA 4750 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || ||||| | || || || || || || || ||||| ||||| ||||||||| Sbjct 4751 GGTTCCACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| |||||||| | ||| | ||| | |||| || || || ||||| || Sbjct 5033 ATACCACCCCTCAATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCT 5092 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | | ||| ||||||||||| || || || |||| || ||||||||||| Sbjct 5093 GAAAGGGTACGACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGT 5152 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||||||||| || || || | ||||| |||| ||| ||||| || | ||| Sbjct 5153 GGAATACCTTCTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCA 5212 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||||| ||| || || || || |||| ||||| ||||| |||||||| Sbjct 5213 ACTTCTAAAGTGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262 Score = 149 bits (164), Expect = 1e-30 Identities = 175/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||||||||| | ||||| ||| | || | |||||| || || Sbjct 5254 AATTTGCATACCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTT 5313 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | || | ||| || |||||||| || ||||| || || | ||||| Sbjct 5314 ATAATCAGAAAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTG 5373 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || || |||||||||||||| ||||| | ||||| |||| ||||||||| || Sbjct 5374 GTCTGGTGGGATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATCAGA 5433 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| ||||| | ||| || || || || |||| || || || ||||| ||||| Sbjct 5434 TGGCTCCACTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| || ||||| |||| ||| | |||| || || ||||||||||| Sbjct 5753 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCA 5812 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || |||| ||| || ||||| || || || || ||||| | ||||| || || Sbjct 5813 GACAATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5872 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| ||||| | ||||| ||| ||| |||||||| | |||| Sbjct 5873 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5932 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | || || ||||| || || | ||||| ||||| |||||||| Sbjct 5933 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 193143 AATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTA 193202 || |||||||||| ||| | |||| || || |||||| || || || | |||| Sbjct 4133 AAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGTTCGC 4192 Query 193203 GAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCT 193262 ||| || ||||||||||| ||||| || || | ||| ||||| ||||| || |||||| Sbjct 4193 CCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCT 4252 Query 193263 TTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTT 193322 ||||| || ||||| | ||| | ||| ||| ||||| |||| || ||||| | || Sbjct 4253 TTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTG 4312 Query 193323 ATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || || || || || |||||||||||||| Sbjct 4313 ATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| || ||||| |||| ||| | |||| || || ||||| ||||| Sbjct 5489 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCA 5548 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || || | ||| || ||||| || || || || ||||| | ||||| || || Sbjct 5549 GACAATGTACGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5608 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| ||||| | ||||| ||| ||| |||||||| | |||| Sbjct 5609 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5668 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | || || ||||| || || | ||||||||||| |||||||| Sbjct 5669 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899357457819600