Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq1220 318 9e-82
seq9911 156 6e-33
>seq1220
Length=9943
Score = 318 bits (352), Expect = 9e-82
Identities = 613/901 (68%), Gaps = 17/901 (2%)
Strand=Plus/Plus
Query 17862 CTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTA 17921
|||||| ||||||||| |||||||| || || || || || || || ||| ||||| |
Sbjct 7166 CTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACCCTCCGTGGATATGA 7225
Query 17922 AATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTATA 17981
||||||||||||||||||||| | | |||||| |||||| || ||||| |
Sbjct 7226 TATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTAGTTCGTTCA 7285
Query 17982 ATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGTA 18041
||||||| || || |||||||| | ||| || ||| | | ||| ||||| |||| ||
Sbjct 7286 ATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCATTCCTATTA 7345
Query 18042 GTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTATTA 18101
|| | ||| | ||||| ||| ||| |||| ||| || ||||| | || || |
Sbjct 7346 AGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGTCGCAAATAA 7405
Query 18102 TGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATAATATAATAAACACG 18161
| | | | | |||||| | | ||| | | || || | || ||||||| || |
Sbjct 7406 TATCGACGATTCGAGATTTCGACGGTTTTTGTACAAT---ATAAGAAAATAATAAGCAAG 7462
Query 18162 CAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGG 18221
|||| ||| || || |||||||| | |||||||||||| || || |||| || |
Sbjct 7463 CAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTTAGACCCG 7522
Query 18222 GCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATAC 18281
|||| | ||||| ||||| | |||||| || || || || || | || ||||| || |
Sbjct 7523 GCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAGAAAATTC 7582
Query 18282 CCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTG---TATTTATTGCTCAGT 18337
| || || ||| ||||| |||| ||| | ||| | || | | |||| |||| |
Sbjct 7583 CTTCGACTGCA-GCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTACTGCTGA-- 7639
Query 18338 ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTA 18397
|||||| | ||||| | ||| | || |||| | ||||| |||||
Sbjct 7640 -TCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCGCATTG 7698
Query 18398 AACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATT 18457
|| ||| ||||| ||||| | || | ||||| || || || | || ||||||
Sbjct 7699 AATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGTACATT 7758
Query 18458 TCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATAT 18517
|| ||| || | || || || || ||||||| ||||| | | || || | |
Sbjct 7759 TCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGTTACT 7818
Query 18518 TGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCG 18577
|||| ||| | ||| | ||| |||| ||| |||||||| || || || | | |||
Sbjct 7819 TGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGATGCAGCG 7878
Query 18578 AAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTTCCATTCA 18637
||||||||||| || ||||| || |||||| | || | ||| | | || ||||| | |
Sbjct 7879 AAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTCCAATGA 7938
Query 18638 TCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTG 18697
||||||||| | |||| ||| |||||||| | ||||||||| || | |||||| ||||||
Sbjct 7939 TCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCTTGTTTG 7998
Query 18698 TACATTTTA---TAAATATCTTCATGTTGTATAGGAAATAATATATATCGTTTATAATTT 18754
|| |||| ||||||| || || ||| || || | | | ||||||| ||||
Sbjct 7999 TA---TTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGGATTT 8055
Query 18755 T 18755
|
Sbjct 8056 T 8056
>seq9911
Length=12084
Score = 156 bits (172), Expect = 6e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| ||| | ||||| | ||||||||||| |||||||||||||| ||| ||
Sbjct 4579 AATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAACCATC 4520
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| |||||| ||| ||||| ||||| |||||||| ||||||||||| ||
Sbjct 4519 GGACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACCA 4460
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| | ||||||| |||||| || || | || ||| | | || | |||||||||||
Sbjct 4459 GCAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCAGATTATAA 4400
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
||| ||||| | || || || ||||| || |||| ||||| |||
Sbjct 4399 TATCCAAAAAGAATCTACACTGCACTTAGTCTTGCGATTGAGAGGAGGT 4351
Score = 154 bits (170), Expect = 2e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| ||| | ||||| | || ||||| || |||||||| ||||| ||| |||
Sbjct 4807 AATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTC 4748
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| ||| || | ||| ||| || ||||| |||||||| ||||||||||| ||
Sbjct 4747 TGATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCA 4688
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| | || |||| ||| ||||| ||| | |||||| | |||||||| ||||||||
Sbjct 4687 ACAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAA 4628
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| ||||| | || || ||||| || || ||||||||||| ||
Sbjct 4627 CATTCAGAAAGAATCCACTCTACATTTGGTATTGAGATTAAGAGGAGG 4580
Score = 149 bits (164), Expect = 9e-31
Identities = 172/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878
|| |||||| || ||| | || || || ||||| ||||| |||||||| ||||| |||
Sbjct 6214 TAGAATGCAGATCTTTGTGAAGACTTTAACTGGTAAAACAATTACATTGGAAGTGGAACC 6155
Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938
||| || | || || || ||| ||| || || || |||||||| || || |||||
Sbjct 6154 TTCAGACACCATCGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGA 6095
Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998
||||| ||||||| | |||||| ||||| | |||||| | ||| |||| |||||
Sbjct 6094 TCAACAGCGATTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACTCTATCTGATTA 6035
Query 155999 TAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
||||| |||||| | || |||||||| ||||||||||| ||||| |||
Sbjct 6034 CAATATTCAGAAAGAGTCCACACTTCATTTGGTGTTAAGATTGAGAGGAGGT 5983
Score = 145 bits (160), Expect = 1e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| ||||| | || ||||| ||||| || || ||||| || ||||| || |||
Sbjct 5490 ATGCAGATATTCGTCAAGACATTAACTGGGAAGACGATTACTTTGGAAGTGGAGCCATCT 5431
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||| || ||| ||||| |||||||||||||| || || ||||| |||
Sbjct 5430 GATACTATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAA 5371
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | ||||| | ||| ||||| || | |||||| | ||| | || ||||||||
Sbjct 5370 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAAC 5311
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| |||||| |||| || ||||| || ||| |||| ||||| |||
Sbjct 5310 ATCCAAAAAGAGTCGACCCTCCATTTGGTATTACGATTGAGAGGTGGT 5263
Score = 143 bits (158), Expect = 4e-29
Identities = 171/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | ||||| |||||||||||||| |||||||| ||||| || ||
Sbjct 5982 ATGCAAATTTTTGTGAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5923
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| |||||| ||| ||||| ||||| || |||||||| || ||||| |||
Sbjct 5922 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5863
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | || || | || || ||||| | |||||| | |||| || || || ||||
Sbjct 5862 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACATTGTCTGACTATA-- 5805
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
||||||||| || | || || ||||| ||| | | |||||||| |||
Sbjct 5804 ATATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGGT 5755
Score = 138 bits (152), Expect = 2e-27
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| |||| || | ||||| |||||||| ||||| ||||| ||| |||
Sbjct 4350 ATGCAAATATTTGTTAAGACCCTTACTGGGAAAACTATCACATTGGAAGTAGAACCTTCA 4291
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| |||||| ||| |||||| || ||||||||||| || |||||||| ||
Sbjct 4290 GATACAATTGAAAACGTTAAAGCTAAAATTCAGGATAAAGAAGGTATTCCTCCAGATCAG 4231
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | ||||| | ||| || || || | |||||| ||||| | |||||||| |||
Sbjct 4230 CAGCGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGGCGAACTCTTTCAGATTACAAT 4171
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGT 156031
|| || ||| || | || || ||||| ||
Sbjct 4170 AT-TCAAAAGGAATCTACCCTACATTTGGT 4142
Score = 134 bits (148), Expect = 2e-26
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| ||||||| || |||||||| || || || |||||||| ||| |||
Sbjct 5262 ATGCAAATTTTTGTTAAAACTTTAACTGGAAAGACCATCACTTTAGAAGTTGAACCATCT 5203
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| ||| || ||| ||| || || ||||||||||| || || || || |||
Sbjct 5202 GATACCATTGAAAATGTAAAAGCTAAGATCCAGGATAAAGAAGGTATTCCACCTGATCAA 5143
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| || | || | || ||||| || | |||||| | || | |||||||||||
Sbjct 5142 CAACGACTAATATTCGCTGGTAAACAATTAGAAGATGGTCGTACCCTTTCAGATTATAAC 5083
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| || | || ||||||||||| ||| |||| || || |||
Sbjct 5082 AT--CCAAAAGGAATCTACCCTTCATTTAGTATTACGATTGAGGGGTGGT 5035
Score = 134 bits (148), Expect = 2e-26
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | ||||| |||||||||||||| |||||||| ||||| || ||
Sbjct 5718 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5659
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| |||||| ||| ||||| ||||| || |||||||| || ||||| |||
Sbjct 5658 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5599
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | || || | || || ||||| | |||||| | | || || || || || |
Sbjct 5598 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGTACATTGTCTGACTACA-- 5541
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
||||||||| || | || || ||||| ||| | | |||||||| |||
Sbjct 5540 ATATCCAAAAGGAATCTACTCTCCATTTGGTGCTTCGTTTAAGAGGTGGT 5491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731630436498000
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