Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 190 4e-43
seq1220 187 5e-42
seq22504 125 1e-23
>seq9911
Length=12084
Score = 190 bits (210), Expect = 4e-43
Identities = 180/230 (78%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | |||||||| ||||| | || | |||||| ||| |||||||||
Sbjct 5261 ATACCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCA 5320
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || ||| |||| ||||||||||||||||||||||| || | ||||| || |||
Sbjct 5321 GAAAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGT 5380
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||||||||| ||||| ||||||||| |||| ||| || | ||
Sbjct 5381 GGGATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCC 5440
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | |||||| || || ||||||||||| || | |||||||||||
Sbjct 5441 ACTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490
Score = 176 bits (194), Expect = 9e-39
Identities = 177/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| || | |||||||||||||| | |||| || || ||| ||||||||
Sbjct 5033 ATACCACCCCTCAATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCT 5092
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| || |||||||||||||| || |||| || ||||||||||||
Sbjct 5093 GAAAGGGTACGACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGT 5152
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||||||||| || || ||| ||||||||| || | ||| || | |||
Sbjct 5153 GGAATACCTTCTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCA 5212
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| ||| ||||| || |||||||| ||||||| ||| || |||||
Sbjct 5213 ACTTCTAAAGTGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262
Score = 168 bits (186), Expect = 1e-36
Identities = 183/243 (75%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| ||||| | | ||| || ||||| | || | |||||| ||||| ||||||
Sbjct 5981 ATACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCA 6040
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||| || || |||| |||||||| || || |||||||| |||| ||||||||| ||
Sbjct 6041 GATAGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGG 6100
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| || || || ||| ||||||||| || | ||||| | |||
Sbjct 6101 GGAATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCC 6160
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATTAGAA 192546
||||| | ||||| |||||||||||||| || || | ||| ||||||||| || ||||
Sbjct 6161 ACTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATTCTAGAAGAA 6220
Query 192547 AAA 192549
|||
Sbjct 6221 AAA 6223
Score = 159 bits (176), Expect = 7e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| || ||||| | | ||||| ||||||| ||| | ||||| || |||||||||
Sbjct 4577 ATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCA 4636
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
||||| || || |||| ||||| |||||||||||||| ||||| | ||||||||| ||
Sbjct 4637 GATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGA 4696
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|||||||||||||| ||||| || ||| ||| |||| |||| ||| || | |||
Sbjct 4697 GGTATTCCTTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCC 4756
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||| | |||||||| || || || | ||||| | ||| || ||||||
Sbjct 4757 ACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807
Score = 158 bits (174), Expect = 2e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | ||| | || ||||| | ||||| || || ||||||||| |||
Sbjct 5753 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCA 5812
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| |||||||| |||| |||||||| || ||||| |||||||| | ||||| || |||
Sbjct 5813 GACAATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5872
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| ||||| |||||| || || | ||| || | ||
Sbjct 5873 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5932
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | ||||||||||| ||||| || ||||| | ||| || |||||
Sbjct 5933 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | ||| | || ||||| | ||||| || || |||||| || |||
Sbjct 5489 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCA 5548
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| || |||| |||||||| || ||||| |||||||| | ||||| || |||
Sbjct 5549 GACAATGTACGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5608
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| ||||| |||||| || || | ||| || | ||
Sbjct 5609 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5668
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | ||||||||||| ||||| || ||||| | ||| || |||||
Sbjct 5669 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718
Score = 143 bits (158), Expect = 5e-29
Identities = 172/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
|| || ||||| | |||||||| | || | ||| | || ||| || ||||| |||||
Sbjct 4805 ATTCCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGA-ATATTGTAATC 4863
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|||| || || |||| |||||||| || |||||||| || || | |||||||| ||
Sbjct 4864 TGATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGG 4923
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| |||||||| || ||||| || || ||| ||||| ||| | ||| | | |||
Sbjct 4924 AGGGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTC 4983
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || ||||| || ||||||||||| ||||||| ||| ||||||||
Sbjct 4984 CACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034
Score = 140 bits (154), Expect = 6e-28
Identities = 166/221 (75%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 192317 TAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTT 192375
|||| || | ||| ||||||| |||| || ||| || ||||| ||||| || | |||
Sbjct 4132 TAAG-CGAAGTACCAAATGTAGGGTAGATTCCTTTTGA-ATATTGTAATCTGAAAGAGTT 4189
Query 192376 CGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCT 192435
|| |||| ||||||||||| || |||||||| || | ||| ||||| || || || |||
Sbjct 4190 CGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCT 4249
Query 192436 TCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGA 192495
|||||||| || |||||| ||| || || || | |||||| | ||||||||| |
Sbjct 4250 TCTTTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAAT 4309
Query 192496 GTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||| ||||| | || |||| |||||| |||||
Sbjct 4310 GTGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350
Score = 129 bits (142), Expect = 1e-24
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| ||||| | || || ||||| || | |||| ||||| ||||||||||||
Sbjct 4349 ATACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCT 4408
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| ||||||||||| || ||||| || || | || || || ||
Sbjct 4409 GAAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGA 4468
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
||||| |||||||| ||||| ||||| ||| || || || | || || | |||
Sbjct 4469 GGTATACCTTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCC 4528
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||||| ||||| ||||| ||||| | ||||| | ||| || ||||||
Sbjct 4529 ACTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCATT 4579
>seq1220
Length=9943
Score = 187 bits (206), Expect = 5e-42
Identities = 548/846 (65%), Gaps = 7/846 (1%)
Strand=Plus/Plus
Query 49581 GATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAAT 49640
||||| | ||||||||||||||||||||| | | ||||||| |||||| | | |
Sbjct 7219 GATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTAGT 7278
Query 49641 ACATATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATA 49700
| | |||||||| || || |||||||||| ||| || ||| ||| || |||||
Sbjct 7279 TCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCATT 7338
Query 49701 CCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgt 49760
|| | ||| ||| || || ||||| || ||| |||| || ||||| || || |
Sbjct 7339 CCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGTCG 7398
Query 49761 ttaattatcataattatattattttttgataatttatatttaatatgattcgcatatatt 49820
||| || | || | ||| || ||| | | ||||| | | | ||| |
Sbjct 7399 CAAATAATATCGACGATTCGAGATTTCGACGGTTTTTGTACAATATAA---GAAAATAAT 7455
Query 49821 aaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880
|| || ||||| ||| ||| || || || || | ||||| |||||||| ||||||
Sbjct 7456 AAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTT 7515
Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940
| || ||||| | |||||||||||| | |||||| ||||| ||||| || | || |||
Sbjct 7516 AGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAG 7575
Query 49941 AATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCT 50000
|| || || ||||| || || |||| || | | || || | | | | ||
Sbjct 7576 AAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTA-CT 7634
Query 50001 AAT-ATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGC 50059
| ||||| | | ||||| | |||||||| | |||||| ||||||| ||
Sbjct 7635 GCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCGC 7694
Query 50060 TTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATA 50119
|| ||||| | ||| || | || | | ||
Sbjct 7695 ATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGTA 7754
Query 50120 CATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGA 50179
|||||| ||| | | || || || |||||||| ||||| | ||||| |
Sbjct 7755 CATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGT 7814
Query 50180 ATACT-GAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATG 50238
|||| |||| || | || ||||| || | ||| ||| || || ||||| ||||
Sbjct 7815 -TACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGATG 7873
Query 50239 CTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTCCC 50298
| ||||| ||||| || |||||||| ||||||||| | || | ||| |||| || | ||
Sbjct 7874 CAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTCC 7933
Query 50299 AAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATT 50358
|| || | ||| | ||||||||||||||||| |||||||||| || ||| ||| ||
Sbjct 7934 AATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCTT 7993
Query 50359 TTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCGTTTAGTAt 50418
||| || | | ||||| || ||| || || || | ||| ||||||| | ||
Sbjct 7994 GTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGGAT 8053
Query 50419 tttttt 50424
||| ||
Sbjct 8054 TTTCTT 8059
>seq22504
Length=90246
Score = 125 bits (138), Expect = 1e-23
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||||||| ||||| | ||| ||||| || ||||| || | ||||| ||||
Sbjct 21224 GTTCAATAATACCGCCTCTCAAACGCAATACCAAGTGTAAGGTGGATTCTTTCTGAATAT 21165
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
||||||| |||| || || | || ||||| ||||||||||| || || | | || |
Sbjct 21164 TATAATCCGATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCT 21105
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
|||| ||||| || ||||| || ||||| |||||| |||||||| || | ||| |
Sbjct 21104 GATCGGGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGG 21045
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 192512
| | ||| || || || || || ||||| || ||
Sbjct 21044 AAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGT 21011
Score = 125 bits (138), Expect = 1e-23
Identities = 170/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 192304 ATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAA 192363
|| |||||||| || | ||| || || || || ||||| | || || ||||||||||
Sbjct 25764 ATGATACCACCCCTCAAACGCAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAA 25705
Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423
|| |||| || || | || ||||| ||||||||||| || || | | || |||||
Sbjct 25704 TCCGATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCG 25645
Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483
||||| || ||||| || ||||| |||||| |||||||| || | ||| || | |
Sbjct 25644 GGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGT 25585
Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540
|| || || || || || ||||| || || | |||||| | || || |||||| ||
Sbjct 25584 TCAACCTCGAGGGTTATTGTTTTCCCTGTAAGTGTTTTCACGAAAATTTGCATTGTA 25528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984146936571750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |