Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq9911 190 4e-43 seq1220 187 5e-42 seq22504 125 1e-23 >seq9911 Length=12084 Score = 190 bits (210), Expect = 4e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | |||||||| ||||| | || | |||||| ||| ||||||||| Sbjct 5261 ATACCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCA 5320 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || ||| |||| ||||||||||||||||||||||| || | ||||| || ||| Sbjct 5321 GAAAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGT 5380 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| ||||| ||||||||| |||| ||| || | || Sbjct 5381 GGGATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCC 5440 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | |||||| || || ||||||||||| || | ||||||||||| Sbjct 5441 ACTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490 Score = 176 bits (194), Expect = 9e-39 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| || | |||||||||||||| | |||| || || ||| |||||||| Sbjct 5033 ATACCACCCCTCAATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCT 5092 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || |||||||||||||| || |||| || |||||||||||| Sbjct 5093 GAAAGGGTACGACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGT 5152 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||||||||| || || ||| ||||||||| || | ||| || | ||| Sbjct 5153 GGAATACCTTCTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCA 5212 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||| ||||| || |||||||| ||||||| ||| || ||||| Sbjct 5213 ACTTCTAAAGTGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262 Score = 168 bits (186), Expect = 1e-36 Identities = 183/243 (75%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| ||||| | | ||| || ||||| | || | |||||| ||||| |||||| Sbjct 5981 ATACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCA 6040 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| || || |||| |||||||| || || |||||||| |||| ||||||||| || Sbjct 6041 GATAGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGG 6100 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| || || || ||| ||||||||| || | ||||| | ||| Sbjct 6101 GGAATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCC 6160 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATTAGAA 192546 ||||| | ||||| |||||||||||||| || || | ||| ||||||||| || |||| Sbjct 6161 ACTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATTCTAGAAGAA 6220 Query 192547 AAA 192549 ||| Sbjct 6221 AAA 6223 Score = 159 bits (176), Expect = 7e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || ||||| | | ||||| ||||||| ||| | ||||| || ||||||||| Sbjct 4577 ATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCA 4636 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| || || |||| ||||| |||||||||||||| ||||| | ||||||||| || Sbjct 4637 GATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGA 4696 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 |||||||||||||| ||||| || ||| ||| |||| |||| ||| || | ||| Sbjct 4697 GGTATTCCTTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCC 4756 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | |||||||| || || || | ||||| | ||| || |||||| Sbjct 4757 ACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | ||| | || ||||| | ||||| || || ||||||||| ||| Sbjct 5753 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCA 5812 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || |||||||| |||| |||||||| || ||||| |||||||| | ||||| || ||| Sbjct 5813 GACAATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5872 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| |||||| || || | ||| || | || Sbjct 5873 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5932 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | ||||||||||| ||||| || ||||| | ||| || ||||| Sbjct 5933 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | ||| | || ||||| | ||||| || || |||||| || ||| Sbjct 5489 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCA 5548 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || ||||| || |||| |||||||| || ||||| |||||||| | ||||| || ||| Sbjct 5549 GACAATGTACGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5608 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| |||||| || || | ||| || | || Sbjct 5609 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5668 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | ||||||||||| ||||| || ||||| | ||| || ||||| Sbjct 5669 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718 Score = 143 bits (158), Expect = 5e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || || ||||| | |||||||| | || | ||| | || ||| || ||||| ||||| Sbjct 4805 ATTCCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGA-ATATTGTAATC 4863 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 |||| || || |||| |||||||| || |||||||| || || | |||||||| || Sbjct 4864 TGATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGG 4923 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || |||||||| || ||||| || || ||| ||||| ||| | ||| | | ||| Sbjct 4924 AGGGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTC 4983 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || ||||| || ||||||||||| ||||||| ||| |||||||| Sbjct 4984 CACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 140 bits (154), Expect = 6e-28 Identities = 166/221 (75%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 192317 TAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTT 192375 |||| || | ||| ||||||| |||| || ||| || ||||| ||||| || | ||| Sbjct 4132 TAAG-CGAAGTACCAAATGTAGGGTAGATTCCTTTTGA-ATATTGTAATCTGAAAGAGTT 4189 Query 192376 CGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCT 192435 || |||| ||||||||||| || |||||||| || | ||| ||||| || || || ||| Sbjct 4190 CGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCT 4249 Query 192436 TCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGA 192495 |||||||| || |||||| ||| || || || | |||||| | ||||||||| | Sbjct 4250 TCTTTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAAT 4309 Query 192496 GTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| ||||| | || |||| |||||| ||||| Sbjct 4310 GTGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| ||||| | || || ||||| || | |||| ||||| |||||||||||| Sbjct 4349 ATACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCT 4408 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| ||||||||||| || ||||| || || | || || || || Sbjct 4409 GAAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGA 4468 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 ||||| |||||||| ||||| ||||| ||| || || || | || || | ||| Sbjct 4469 GGTATACCTTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCC 4528 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||||| ||||| ||||| ||||| | ||||| | ||| || |||||| Sbjct 4529 ACTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCATT 4579 >seq1220 Length=9943 Score = 187 bits (206), Expect = 5e-42 Identities = 548/846 (65%), Gaps = 7/846 (1%) Strand=Plus/Plus Query 49581 GATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAAT 49640 ||||| | ||||||||||||||||||||| | | ||||||| |||||| | | | Sbjct 7219 GATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACAACCTAGT 7278 Query 49641 ACATATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATA 49700 | | |||||||| || || |||||||||| ||| || ||| ||| || ||||| Sbjct 7279 TCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCAGTTCATT 7338 Query 49701 CCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgt 49760 || | ||| ||| || || ||||| || ||| |||| || ||||| || || | Sbjct 7339 CCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAACCGCGTCG 7398 Query 49761 ttaattatcataattatattattttttgataatttatatttaatatgattcgcatatatt 49820 ||| || | || | ||| || ||| | | ||||| | | | ||| | Sbjct 7399 CAAATAATATCGACGATTCGAGATTTCGACGGTTTTTGTACAATATAA---GAAAATAAT 7455 Query 49821 aaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880 || || ||||| ||| ||| || || || || | ||||| |||||||| |||||| Sbjct 7456 AAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGAGAAAGTT 7515 Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940 | || ||||| | |||||||||||| | |||||| ||||| ||||| || | || ||| Sbjct 7516 AGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCCGGAGAAG 7575 Query 49941 AATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCT 50000 || || || ||||| || || |||| || | | || || | | | | || Sbjct 7576 AAAATTCCTTCGACTGCAGCGAAAGCTACTAAACGCTCACCGAAGGTCGCCTCTTTA-CT 7634 Query 50001 AAT-ATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGC 50059 | ||||| | | ||||| | |||||||| | |||||| ||||||| || Sbjct 7635 GCTGATCCATTGCAGGGCCCAGTTAGCTTTTTTGGCTACGCAAGGTAGTGTTTCTATCGC 7694 Query 50060 TTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATA 50119 || ||||| | ||| || | || | | || Sbjct 7695 ATTGAATAAAAATTCTTTCTCTTTCGGGTCGCTGATATACGTTTCAATAAGCATGCTGTA 7754 Query 50120 CATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGA 50179 |||||| ||| | | || || || |||||||| ||||| | ||||| | Sbjct 7755 CATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCAGT 7814 Query 50180 ATACT-GAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATG 50238 |||| |||| || | || ||||| || | ||| ||| || || ||||| |||| Sbjct 7815 -TACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGATG 7873 Query 50239 CTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTCCC 50298 | ||||| ||||| || |||||||| ||||||||| | || | ||| |||| || | || Sbjct 7874 CAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATTCC 7933 Query 50299 AAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATT 50358 || || | ||| | ||||||||||||||||| |||||||||| || ||| ||| || Sbjct 7934 AATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGCTT 7993 Query 50359 TTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCGTTTAGTAt 50418 ||| || | | ||||| || ||| || || || | ||| ||||||| | || Sbjct 7994 GTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGGAT 8053 Query 50419 tttttt 50424 ||| || Sbjct 8054 TTTCTT 8059 >seq22504 Length=90246 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||||||||| ||||| | ||| ||||| || ||||| || | ||||| |||| Sbjct 21224 GTTCAATAATACCGCCTCTCAAACGCAATACCAAGTGTAAGGTGGATTCTTTCTGAATAT 21165 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 ||||||| |||| || || | || ||||| ||||||||||| || || | | || | Sbjct 21164 TATAATCCGATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCT 21105 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 |||| ||||| || ||||| || ||||| |||||| |||||||| || | ||| | Sbjct 21104 GATCGGGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGG 21045 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 192512 | | ||| || || || || || ||||| || || Sbjct 21044 AAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGT 21011 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 192304 ATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAA 192363 || |||||||| || | ||| || || || || ||||| | || || |||||||||| Sbjct 25764 ATGATACCACCCCTCAAACGCAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAA 25705 Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423 || |||| || || | || ||||| ||||||||||| || || | | || ||||| Sbjct 25704 TCCGATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCG 25645 Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483 ||||| || ||||| || ||||| |||||| |||||||| || | ||| || | | Sbjct 25644 GGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGT 25585 Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540 || || || || || || ||||| || || | |||||| | || || |||||| || Sbjct 25584 TCAACCTCGAGGGTTATTGTTTTCCCTGTAAGTGTTTTCACGAAAATTTGCATTGTA 25528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984146936571750