Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq9911 190 4e-43 seq1220 188 1e-42 seq22504 125 1e-23 >seq9911 Length=12084 Score = 190 bits (210), Expect = 4e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | ||||||||| ||||| | || | |||||| || |||||||| Sbjct 5261 ATACCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCA 5320 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || ||| | || |||||||||||||||||||| || || | |||||||| ||| Sbjct 5321 GAAAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGT 5380 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||| ||||| ||||||||| |||||||| || | || Sbjct 5381 GGGATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCC 5440 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | |||||| || || ||||||||||| || | |||||||||||| Sbjct 5441 ACTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490 Score = 167 bits (184), Expect = 4e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| || | ||||||||||||||| | |||| || || || ||||||||| Sbjct 5033 ATACCACCCCTCAATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCT 5092 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || || |||||||||||||| || |||| || ||||| |||||| Sbjct 5093 GAAAGGGTACGACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGT 5152 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || || ||| ||||||||| || ||||| || | ||| Sbjct 5153 GGAATACCTTCTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCA 5212 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||| ||||| || |||||||| ||||||| || || ||||| Sbjct 5213 ACTTCTAAAGTGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262 Score = 159 bits (176), Expect = 6e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || ||||| ||||||| ||| | ||||| ||| |||||||| Sbjct 4577 ATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCA 4636 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | || ||||| |||||||||||||||||||| | |||||| || || Sbjct 4637 GATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGA 4696 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 |||||||||||||| ||||| || ||| ||| |||| |||||||| || | ||| Sbjct 4697 GGTATTCCTTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCC 4756 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | |||||||| || || || | ||||| | || || |||||| Sbjct 4757 ACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807 Score = 154 bits (170), Expect = 3e-32 Identities = 180/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| ||||| | || ||| || ||||| | || | |||||| |||||| ||||| Sbjct 5981 ATACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCA 6040 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| || || | || |||||||| || || ||||| || |||| |||||| || || Sbjct 6041 GATAGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGG 6100 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| || || || ||| ||||||||| || || ||||| | ||| Sbjct 6101 GGAATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCC 6160 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAA 172079 ||||| | ||||| |||||||||||||| || || | || ||||||||| || | || Sbjct 6161 ACTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATTCTAGAAGAA 6220 Query 172080 AAA 172082 ||| Sbjct 6221 AAA 6223 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | |||||||| | || | ||| | || || |||||| |||||| Sbjct 4805 ATTCCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCT 4864 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| || || | || |||||||| || |||||||| || || | ||||| || || Sbjct 4865 GATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGA 4924 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || ||||| || || ||| ||||| ||| ||||| | | ||| Sbjct 4925 GGGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCC 4984 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || ||||| || ||||||||||| ||||||| || |||||||| Sbjct 4985 ACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 132 bits (146), Expect = 9e-26 Identities = 162/220 (74%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 171850 TAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATC 171909 |||| || | ||| ||||||| |||| || || |||||| |||||||| | || || Sbjct 4132 TAAG-CGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGTTC 4190 Query 171910 GTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTT 171969 | | || ||||||||||| || ||||| || || | ||| || || || || || |||| Sbjct 4191 GCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTT 4250 Query 171970 CTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAG 172029 ||||||| || |||||| ||| || || || |||||||| | ||||||||| | | Sbjct 4251 CTTTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATG 4310 Query 172030 TAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || ||||| ||||| | || |||| ||||| ||||| Sbjct 4311 TGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350 Score = 132 bits (146), Expect = 9e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| ||||| | ||| || ||||| || | |||| ||||| |||||||||||| Sbjct 4349 ATACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCT 4408 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || ||||||||||| || |||||||| || | || ||||| || Sbjct 4409 GAAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGA 4468 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 ||||| |||||||| ||||| ||||| ||| || || || || || || | ||| Sbjct 4469 GGTATACCTTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCC 4528 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||||| ||||| ||||| ||||| | ||||| | || || |||||| Sbjct 4529 ACTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCATT 4579 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | || ||||| | ||||| || || |||||||| || Sbjct 5753 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCA 5812 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | ||| | || |||||||| || ||||| || ||||| | |||||||| ||| Sbjct 5813 GACAATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5872 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| ||||| |||||| || || ||||| || | || Sbjct 5873 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5932 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | ||||||||||| ||||| || ||||| | || || ||||| Sbjct 5933 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | || ||||| | ||||| || || ||||| || || Sbjct 5489 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCA 5548 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || | || |||||||| || ||||| || ||||| | |||||||| ||| Sbjct 5549 GACAATGTACGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5608 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| ||||| |||||| || || ||||| || | || Sbjct 5609 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5668 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | ||||||||||| ||||| || ||||| | || || ||||| Sbjct 5669 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718 >seq1220 Length=9943 Score = 188 bits (208), Expect = 1e-42 Identities = 344/501 (69%), Gaps = 16/501 (3%) Strand=Plus/Plus Query 38764 ATGAATATTATAATTAAAAACTAGCATCTAAGGTAAAAATTGCATTATCACTATTCATCA 38823 || || | || |||||||| ||||||| || || | ||||||| | | ||||| Sbjct 7097 ATTAAAAATAAAATTAAAAGTCAGCATCTGTAGTGAATA---CATTATC-CAAGACATCA 7152 Query 38824 CATTGTA--------TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCC 38875 | ||||| |||||||||||| |||||||||||| |||||||| ||||| || Sbjct 7153 C-TTGTAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACC 7211 Query 38876 TTCTAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCC 38935 || ||||| | ||||||||||||||||||||| | | ||||||| |||||| | Sbjct 7212 CTCCGTGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACA 7271 Query 38936 TATCAATACATATAATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACA 38995 | | | | |||||||| || || |||||||||| ||| || ||| ||| || Sbjct 7272 ACCTAGTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCA 7331 Query 38996 ATTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctac 39055 ||||| || | ||| ||| || || ||||| || ||| |||| || ||||| || Sbjct 7332 GTTCATTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAAC 7391 Query 39056 agcttgtttaattatcataattatattattttttgataatttatatttaatatgattcgc 39115 || | ||| || | || | ||| || ||| | | ||||| | | Sbjct 7392 CGCGTCGCAAATAATATCGACGATTCGAGATTTCGACGGTTTTTGTACAATATAA---GA 7448 Query 39116 atataGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACT 39175 | ||| ||| || ||||| || ||| || ||||| || | ||||| |||||||| Sbjct 7449 AAATAATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGA 7508 Query 39176 AAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACT 39235 ||||||| || ||||| | |||||||||||| | |||||| ||||| ||||| || | Sbjct 7509 GAAAGTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCC 7568 Query 39236 AGAAAAGAATATACCCTCCAC 39256 || ||||| || || || || Sbjct 7569 GGAGAAGAAAATTCCTTCGAC 7589 Score = 120 bits (132), Expect = 5e-22 Identities = 213/308 (69%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 39420 TACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCT 39479 |||||||| ||| | | || || || |||||||| ||||| || ||||| Sbjct 7753 TACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCA 7812 Query 39480 GAATACT-GAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGA 39538 | |||| |||| || | || ||||| || | ||| ||| || || ||||| || Sbjct 7813 GT-TACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGA 7871 Query 39539 TGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTC 39598 ||| ||||| ||||| || || ||||| ||||||||| | || | ||| |||| || | Sbjct 7872 TGCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATT 7931 Query 39599 CCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGA 39658 |||| || | ||| | ||||||||||||||||| |||||||||| || ||| ||| Sbjct 7932 CCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGC 7991 Query 39659 TTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGT 39718 || ||| || | | ||||| || ||| || || || | ||| ||||||| | Sbjct 7992 TTGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGG 8051 Query 39719 Attttttt 39726 ||||| || Sbjct 8052 ATTTTCTT 8059 >seq22504 Length=90246 Score = 125 bits (138), Expect = 1e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 |||||||| ||||| | || ||||| || ||||| || | ||||| |||||||||| Sbjct 21219 ATAATACCGCCTCTCAAACGCAATACCAAGTGTAAGGTGGATTCTTTCTGAATATTATAA 21160 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || |||| || || |||| ||||| ||||||||||| || || | | || || || Sbjct 21159 TCCGATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCG 21100 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| || ||||| |||||| |||||||| || ||||| || | | Sbjct 21099 GGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGT 21040 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGT 172045 || || || || || || ||||| || || Sbjct 21039 TCAACCTCGAGGGTTATTGTTTTCCCTGT 21011 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || |||||||| || | || || || || || ||||| | || || ||||||||| Sbjct 25764 ATGATACCACCCCTCAAACGCAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAA 25705 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || |||| || || |||| ||||| ||||||||||| || || | | || || || Sbjct 25704 TCCGATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCG 25645 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| || ||||| |||||| |||||||| || ||||| || | | Sbjct 25644 GGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGT 25585 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTA 172073 || || || || || || ||||| || || | |||||| | ||| || |||||| || Sbjct 25584 TCAACCTCGAGGGTTATTGTTTTCCCTGTAAGTGTTTTCACGAAAATTTGCATTGTA 25528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904837248549000