Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 190 4e-43
seq1220 188 1e-42
seq22504 125 1e-23
>seq9911
Length=12084
Score = 190 bits (210), Expect = 4e-43
Identities = 180/230 (78%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | ||||||||| ||||| | || | |||||| || ||||||||
Sbjct 5261 ATACCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCA 5320
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || ||| | || |||||||||||||||||||| || || | |||||||| |||
Sbjct 5321 GAAAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGT 5380
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||||||||| ||||| ||||||||| |||||||| || | ||
Sbjct 5381 GGGATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCC 5440
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | |||||| || || ||||||||||| || | ||||||||||||
Sbjct 5441 ACTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490
Score = 167 bits (184), Expect = 4e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| || | ||||||||||||||| | |||| || || || |||||||||
Sbjct 5033 ATACCACCCCTCAATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCT 5092
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || | || || |||||||||||||| || |||| || ||||| ||||||
Sbjct 5093 GAAAGGGTACGACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGT 5152
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||||||||| || || ||| ||||||||| || ||||| || | |||
Sbjct 5153 GGAATACCTTCTTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCA 5212
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||||| ||| ||||| || |||||||| ||||||| || || |||||
Sbjct 5213 ACTTCTAAAGTGATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262
Score = 159 bits (176), Expect = 6e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| || ||||| | || ||||| ||||||| ||| | ||||| ||| ||||||||
Sbjct 4577 ATTCCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCA 4636
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||||| || | || ||||| |||||||||||||||||||| | |||||| || ||
Sbjct 4637 GATAAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGA 4696
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|||||||||||||| ||||| || ||| ||| |||| |||||||| || | |||
Sbjct 4697 GGTATTCCTTCTTTGTCTTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCC 4756
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | |||||||| || || || | ||||| | || || ||||||
Sbjct 4757 ACTTCCAATGTAATGGTCTTTCCCGTAAGAGTTTTCACAAAAATTTGCATT 4807
Score = 154 bits (170), Expect = 3e-32
Identities = 180/243 (74%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||| ||||| | || ||| || ||||| | || | |||||| |||||| |||||
Sbjct 5981 ATACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCA 6040
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || || | || |||||||| || || ||||| || |||| |||||| || ||
Sbjct 6041 GATAGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGG 6100
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| || || || ||| ||||||||| || || ||||| | |||
Sbjct 6101 GGAATACCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTGTCTGAAGGTTCC 6160
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAA 172079
||||| | ||||| |||||||||||||| || || | || ||||||||| || | ||
Sbjct 6161 ACTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCATTCTAGAAGAA 6220
Query 172080 AAA 172082
|||
Sbjct 6221 AAA 6223
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| || ||||| | |||||||| | || | ||| | || || |||||| ||||||
Sbjct 4805 ATTCCTCCTCTCAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATCT 4864
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || || | || |||||||| || |||||||| || || | ||||| || ||
Sbjct 4865 GATAGAGTGCGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGA 4924
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| |||||||| || ||||| || || ||| ||||| ||| ||||| | | |||
Sbjct 4925 GGGATTCCTTCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCC 4984
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || ||||| || ||||||||||| ||||||| || ||||||||
Sbjct 4985 ACTTCAAGTGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034
Score = 132 bits (146), Expect = 9e-26
Identities = 162/220 (74%), Gaps = 1/220 (0%)
Strand=Plus/Plus
Query 171850 TAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATC 171909
|||| || | ||| ||||||| |||| || || |||||| |||||||| | || ||
Sbjct 4132 TAAG-CGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGTTC 4190
Query 171910 GTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTT 171969
| | || ||||||||||| || ||||| || || | ||| || || || || || ||||
Sbjct 4191 GCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTT 4250
Query 171970 CTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAG 172029
||||||| || |||||| ||| || || || |||||||| | ||||||||| | |
Sbjct 4251 CTTTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATG 4310
Query 172030 TAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
| || ||||| ||||| | || |||| ||||| |||||
Sbjct 4311 TGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350
Score = 132 bits (146), Expect = 9e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||| ||||| | ||| || ||||| || | |||| ||||| ||||||||||||
Sbjct 4349 ATACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCT 4408
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || | || ||||||||||| || |||||||| || | || ||||| ||
Sbjct 4409 GAAAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGA 4468
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
||||| |||||||| ||||| ||||| ||| || || || || || || | |||
Sbjct 4469 GGTATACCTTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCC 4528
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||||| ||||| ||||| ||||| | ||||| | || || ||||||
Sbjct 4529 ACTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCATT 4579
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || | || ||||| | ||||| || || |||||||| ||
Sbjct 5753 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTATAGTCA 5812
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | ||| | || |||||||| || ||||| || ||||| | |||||||| |||
Sbjct 5813 GACAATGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5872
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| ||||| |||||| || || ||||| || | ||
Sbjct 5873 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5932
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||||||||||| ||||| || ||||| | || || |||||
Sbjct 5933 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTCACAAAAATTTGCAT 5982
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || | || ||||| | ||||| || || ||||| || ||
Sbjct 5489 ATACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCA 5548
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || |||||||| || ||||| || ||||| | |||||||| |||
Sbjct 5549 GACAATGTACGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGT 5608
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| ||||| |||||| || || ||||| || | ||
Sbjct 5609 GGGATGCCTTCCTTGTCTTGAATTTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCA 5668
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||||||||||| ||||| || ||||| | || || |||||
Sbjct 5669 ACTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCAT 5718
>seq1220
Length=9943
Score = 188 bits (208), Expect = 1e-42
Identities = 344/501 (69%), Gaps = 16/501 (3%)
Strand=Plus/Plus
Query 38764 ATGAATATTATAATTAAAAACTAGCATCTAAGGTAAAAATTGCATTATCACTATTCATCA 38823
|| || | || |||||||| ||||||| || || | ||||||| | | |||||
Sbjct 7097 ATTAAAAATAAAATTAAAAGTCAGCATCTGTAGTGAATA---CATTATC-CAAGACATCA 7152
Query 38824 CATTGTA--------TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCC 38875
| ||||| |||||||||||| |||||||||||| |||||||| ||||| ||
Sbjct 7153 C-TTGTAACGCCTACTTTTTGGTATTCTCCAACTTTTTTTTCAAAAAAGTTAGTTTTACC 7211
Query 38876 TTCTAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCC 38935
|| ||||| | ||||||||||||||||||||| | | ||||||| |||||| |
Sbjct 7212 CTCCGTGGATATGATATTCATAAAATCAAATGGATTGCTTGAATTATAAACTTTTTCACA 7271
Query 38936 TATCAATACATATAATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACA 38995
| | | | |||||||| || || |||||||||| ||| || ||| ||| ||
Sbjct 7272 ACCTAGTTCGTTCAATAATCTGTCAGCGACAAATTCAATATACTGACTCATAGATTTGCA 7331
Query 38996 ATTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctac 39055
||||| || | ||| ||| || || ||||| || ||| |||| || ||||| ||
Sbjct 7332 GTTCATTCCTATTAAGCTAACAGGCAAGGCATCGGTAAGAAACTCTTGCTCGATTTCAAC 7391
Query 39056 agcttgtttaattatcataattatattattttttgataatttatatttaatatgattcgc 39115
|| | ||| || | || | ||| || ||| | | ||||| | |
Sbjct 7392 CGCGTCGCAAATAATATCGACGATTCGAGATTTCGACGGTTTTTGTACAATATAA---GA 7448
Query 39116 atataGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACT 39175
| ||| ||| || ||||| || ||| || ||||| || | ||||| ||||||||
Sbjct 7449 AAATAATAAGCAAGCAAATTCATAATGCAATCCTTCATCGCGGGATATTAATTCATTGGA 7508
Query 39176 AAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACT 39235
||||||| || ||||| | |||||||||||| | |||||| ||||| ||||| || |
Sbjct 7509 GAAAGTTAGACCCGGCATAAGTCCTCTCTTTTTCAACCAAAAAATTGAAGCAAAGCTTCC 7568
Query 39236 AGAAAAGAATATACCCTCCAC 39256
|| ||||| || || || ||
Sbjct 7569 GGAGAAGAAAATTCCTTCGAC 7589
Score = 120 bits (132), Expect = 5e-22
Identities = 213/308 (69%), Gaps = 2/308 (1%)
Strand=Plus/Plus
Query 39420 TACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCT 39479
|||||||| ||| | | || || || |||||||| ||||| || |||||
Sbjct 7753 TACATTTCGCTATGAATATTCTCAATTGCAATTTGAAAACCGTAAAAACACCGGGCTTCA 7812
Query 39480 GAATACT-GAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGA 39538
| |||| |||| || | || ||||| || | ||| ||| || || ||||| ||
Sbjct 7813 GT-TACTTGAACCTCTTGACTAAAACGTTCCACCAGATTTTCATTAACGATTCCATCGGA 7871
Query 39539 TGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTC 39598
||| ||||| ||||| || || ||||| ||||||||| | || | ||| |||| || |
Sbjct 7872 TGCAGCGAAAAATGCCAAGACGTATTTGATAAAATGTCTCTCGTCATCGGTTAATTTATT 7931
Query 39599 CCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGA 39658
|||| || | ||| | ||||||||||||||||| |||||||||| || ||| |||
Sbjct 7932 CCAATGATCTATATCTCTAGATAAATCTACTTCTTCGGTTGTCCAAAACGAGGCTTCGGC 7991
Query 39659 TTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGT 39718
|| ||| || | | ||||| || ||| || || || | ||| ||||||| |
Sbjct 7992 TTGTTTGTATTTAGCCCAAATATCGGGATATTCTATTGGGAAAACAACAAATCGTTTGGG 8051
Query 39719 Attttttt 39726
||||| ||
Sbjct 8052 ATTTTCTT 8059
>seq22504
Length=90246
Score = 125 bits (138), Expect = 1e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|||||||| ||||| | || ||||| || ||||| || | ||||| ||||||||||
Sbjct 21219 ATAATACCGCCTCTCAAACGCAATACCAAGTGTAAGGTGGATTCTTTCTGAATATTATAA 21160
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| |||| || || |||| ||||| ||||||||||| || || | | || || ||
Sbjct 21159 TCCGATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCG 21100
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| |||||| |||||||| || ||||| || | |
Sbjct 21099 GGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGT 21040
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGT 172045
|| || || || || || ||||| || ||
Sbjct 21039 TCAACCTCGAGGGTTATTGTTTTCCCTGT 21011
Score = 125 bits (138), Expect = 1e-23
Identities = 170/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| |||||||| || | || || || || || ||||| | || || |||||||||
Sbjct 25764 ATGATACCACCCCTCAAACGCAACACCAAGTGCAAAGTGGATTCCTTCTGGATATTATAA 25705
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| |||| || || |||| ||||| ||||||||||| || || | | || || ||
Sbjct 25704 TCCGATAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCG 25645
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| |||||| |||||||| || ||||| || | |
Sbjct 25644 GGTGGGATACCTTCCTTGTCTTGAATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGT 25585
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTA 172073
|| || || || || || ||||| || || | |||||| | ||| || |||||| ||
Sbjct 25584 TCAACCTCGAGGGTTATTGTTTTCCCTGTAAGTGTTTTCACGAAAATTTGCATTGTA 25528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 904837248549000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |