Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq9562 100 8e-16 seq9727 95.1 4e-14 >seq9562 Length=20090 Score = 100 bits (110), Expect = 8e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| || | |||||||||||||||||||||| | ||| |||||||| ||| Sbjct 12837 TCCATAGCCTTTATGAGACGACGCTGAATATAACCAGTTTCGGCTGTCTTTACAGCAGTA 12896 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAA 302669 || || ||||| |||||||||||||||| ||||| Sbjct 12897 TCGATAAGACCTTCACGACCACCCATAGCGTGGAA 12931 >seq9727 Length=86908 Score = 95.1 bits (104), Expect = 4e-14 Identities = 150/214 (70%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 289024 TTTTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCA 289083 ||| | ||||| || || ||||| || ||||| | | ||| || | | |||| || Sbjct 30909 TTTCTTCCAACGGCGTCTATTTCATCTATGAATAATATACATGGCGCGTGACGTCTTGCC 30968 Query 289084 ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCA 289143 || | ||| || |||| || | || | |||| ||||||| |||| || | ||| || Sbjct 30969 ATGGAAAACAAATCTCGCACCCTAGAAGGGCCAACACCAACAAACATCTCAAGAAACTCG 31028 Query 289144 GAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGT 289203 ||| |||| || ||||||| |||||||||||||||||| ||| |||| || | Sbjct 31029 GAACCGGACACGGTGATGAATGGAACATTTGCTTCGCCTGCTGTTGCTTTCGCGAGCAAA 31088 Query 289204 GTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 || || || ||||| || || || || ||| ||| Sbjct 31089 GTTTTGCCAGTTCCGGGCGGGCCTTC-AATTGAA 31121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471319663408485