Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq19917 87.8 2e-11 seq19472 87.8 2e-11 >seq19917 Length=26674 Score = 87.8 bits (96), Expect = 2e-11 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || ||||| ||| | | | || || |||||||| ||||||||||| | ||||| Sbjct 2954 GCAAGTTCACCGGGAAGCAATAGACGAACGGCGGTTTGGATCTCGCGACTCGTAATCGTC 2895 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 | || || | || || |||||| ||| || | |||| | |||| ||||| Sbjct 2894 GCCCTTTTATTATAATGAGCGAGACGGGAGGCTTCCGCTGCGATCCTCTCGAAGATGTCA 2835 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 || || || |||||||| ||||| |||| |||| ||||| ||| ||||| || Sbjct 2834 TTAACGAAACTGTTCATGATGCTCATCGCCTTGCTGGATATGCCGGTGTCCGGGTGAACT 2775 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| ||||||||||||||| Sbjct 2774 TGCTTCAGCACCTTGTAGATG 2754 Score = 87.8 bits (96), Expect = 2e-11 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || ||||| ||| | | | || || |||||||| ||||||||||| | ||||| Sbjct 5409 GCAAGTTCACCGGGAAGCAATAGACGAACGGCGGTTTGGATCTCGCGACTCGTAATCGTC 5350 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 | || || | || || |||||| ||| || | |||| | |||| ||||| Sbjct 5349 GCCCTTTTATTATAATGAGCGAGACGGGAGGCTTCCGCTGCGATCCTCTCGAAGATGTCA 5290 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 || || || |||||||| ||||| |||| |||| ||||| ||| ||||| || Sbjct 5289 TTAACGAAACTGTTCATGATGCTCATCGCCTTGCTGGATATGCCGGTGTCCGGGTGAACT 5230 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| ||||||||||||||| Sbjct 5229 TGCTTCAGCACCTTGTAGATG 5209 >seq19472 Length=7445 Score = 87.8 bits (96), Expect = 2e-11 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || ||||| ||| | | | || || |||||||| ||||||||||| | ||||| Sbjct 2172 GCAAGTTCACCGGGAAGCAATAGACGAACGGCGGTTTGGATCTCGCGACTCGTAATCGTC 2113 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 | || || | || || |||||| ||| || | |||| | |||| ||||| Sbjct 2112 GCCCTTTTATTATAATGAGCGAGACGGGAGGCTTCCGCTGCGATCCTCTCGAAGATGTCA 2053 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 || || || |||||||| ||||| |||| |||| ||||| ||| ||||| || Sbjct 2052 TTAACGAAACTGTTCATGATGCTCATCGCCTTGCTGGATATGCCGGTGTCCGGGTGAACT 1993 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| ||||||||||||||| Sbjct 1992 TGCTTCAGCACCTTGTAGATG 1972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104972282045385