Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq22639 91.5 2e-13
seq16396 86.0 8e-12
>seq22639
Length=125898
Score = 91.5 bits (100), Expect = 2e-13
Identities = 259/384 (67%), Gaps = 13/384 (3%)
Strand=Plus/Minus
Query 172467 TGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACT-GAAAGAAAAGA 172525
||||| | ||| || ||||||| || ||||||| || |||||| | || ||| ||||
Sbjct 12896 TGGAAAGCAAATAGTACTCGTGATTTCTTAGATTC-TGTTGGTTTAATCGATAGAGAAGA 12838
Query 172526 AGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGA 172585
||||||| |||| |||||||| || ||||||||| | ||| |||||| | |||| | |
Sbjct 12837 AGGTGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTATA-CAA 12779
Query 172586 CTGTG-ATACAGATTACAC-AGGACAAGGAGTGGACCAATTAAGTCAAACTATTAATAC- 172642
| || || | ||||| || | | ||| | || || || | || || |||||
Sbjct 12778 ATATGCATGCCGATTATACTAATAGGGGGA-TAGATCAGTTGATGGAAGTGATAAATACA 12720
Query 172643 TTTACAAAACAACC-CAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTCAAC 172701
| | || | ||| || | |||| | || | || | |||||| | | |
Sbjct 12719 ATAAGGAATCGACCGCATGA--TAGACGCATCATTATGTGTGCATGGAATCCAGTTGATA 12662
Query 172702 TTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTCAGaaaaaaaT 172761
| |||||||| |||||| ||||||||| || | |||||||| ||| | || ||
Sbjct 12661 TACCTAAAATGGCTCTTCCACCTTGCCATTGCTTGGTACAATTTTTTGT-TGCGAATAAC 12603
Query 172762 CAATCTTAGATTGTCAGTTATATCAAAGATCAGCTGATTTAGGATTGGGGGTACCTTATA 172821
| ||| ||| | |||||||||||||| || ||| | || | || ||||| | ||
Sbjct 12602 GA--GTTATCTTGCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTTTA 12545
Query 172822 ATATTGGATTTTATTCATTTTTAA 172845
|||||| | ||| | || ||||
Sbjct 12544 ATATTGCAAGCTATGCCTTATTAA 12521
>seq16396
Length=61276
Score = 86.0 bits (94), Expect = 8e-12
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 116818 TaaaaaaaaTGCTGTTATTATGGGTCGAAAAACATGGGATAGTATTCCTAATAAATTTAA 116877
|||||| || | |||||| |||||| ||||||| |||||||| |||||| ||||||||
Sbjct 21080 TAAAAAGAACGTTGTTATCATGGGTAGAAAAACGTGGGATAGCATTCCTCCGAAATTTAA 21139
Query 116878 ACCATTAAAAAATCGAATAAAT 116899
||||||| |||| |||| |||
Sbjct 21140 ACCATTAGCAAATAGAATTAAT 21161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632280838901400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |