Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq22639 91.5 2e-13 seq16396 86.0 8e-12 >seq22639 Length=125898 Score = 91.5 bits (100), Expect = 2e-13 Identities = 259/384 (67%), Gaps = 13/384 (3%) Strand=Plus/Minus Query 172467 TGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACT-GAAAGAAAAGA 172525 ||||| | ||| || ||||||| || ||||||| || |||||| | || ||| |||| Sbjct 12896 TGGAAAGCAAATAGTACTCGTGATTTCTTAGATTC-TGTTGGTTTAATCGATAGAGAAGA 12838 Query 172526 AGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGA 172585 ||||||| |||| |||||||| || ||||||||| | ||| |||||| | |||| | | Sbjct 12837 AGGTGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTATA-CAA 12779 Query 172586 CTGTG-ATACAGATTACAC-AGGACAAGGAGTGGACCAATTAAGTCAAACTATTAATAC- 172642 | || || | ||||| || | | ||| | || || || | || || ||||| Sbjct 12778 ATATGCATGCCGATTATACTAATAGGGGGA-TAGATCAGTTGATGGAAGTGATAAATACA 12720 Query 172643 TTTACAAAACAACC-CAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTCAAC 172701 | | || | ||| || | |||| | || | || | |||||| | | | Sbjct 12719 ATAAGGAATCGACCGCATGA--TAGACGCATCATTATGTGTGCATGGAATCCAGTTGATA 12662 Query 172702 TTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTCAGaaaaaaaT 172761 | |||||||| |||||| ||||||||| || | |||||||| ||| | || || Sbjct 12661 TACCTAAAATGGCTCTTCCACCTTGCCATTGCTTGGTACAATTTTTTGT-TGCGAATAAC 12603 Query 172762 CAATCTTAGATTGTCAGTTATATCAAAGATCAGCTGATTTAGGATTGGGGGTACCTTATA 172821 | ||| ||| | |||||||||||||| || ||| | || | || ||||| | || Sbjct 12602 GA--GTTATCTTGCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTTTA 12545 Query 172822 ATATTGGATTTTATTCATTTTTAA 172845 |||||| | ||| | || |||| Sbjct 12544 ATATTGCAAGCTATGCCTTATTAA 12521 >seq16396 Length=61276 Score = 86.0 bits (94), Expect = 8e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 116818 TaaaaaaaaTGCTGTTATTATGGGTCGAAAAACATGGGATAGTATTCCTAATAAATTTAA 116877 |||||| || | |||||| |||||| ||||||| |||||||| |||||| |||||||| Sbjct 21080 TAAAAAGAACGTTGTTATCATGGGTAGAAAAACGTGGGATAGCATTCCTCCGAAATTTAA 21139 Query 116878 ACCATTAAAAAATCGAATAAAT 116899 ||||||| |||| |||| ||| Sbjct 21140 ACCATTAGCAAATAGAATTAAT 21161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632280838901400