Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq16388 215 4e-51 seq9911 104 2e-17 seq22544 82.4 6e-11 >seq16388 Length=78583 Score = 215 bits (238), Expect = 4e-51 Identities = 224/294 (76%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 34350 CACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCC 34409 |||| ||||||| || || ||||| | || || || | || |||| || || || || Sbjct 13194 CACATACTTGCGTATAAATCCATCCAAAAGATCTTGCAGTTTCACGGCATCATGCGAACC 13135 Query 34410 GTTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCC 34469 |||||||||||| || |||||||| |||||| ||| |||||||||||||||||||| || Sbjct 13134 GTTGACGATGAAGCGCTCGTTTTTAAAATCGAACTGAGTTTGCGCGCCCAGCTCGCAACC 13075 Query 34470 GAAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTT 34529 ||||||||| || ||||| | | |||||| || || || || || | |||| |||||| Sbjct 13074 GAAGTACTTGGTAGGGTAGGTCGGCGGACGGCCTAGGGCTTTTGCCACCTCGGCCATGTT 13015 Query 34530 GACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCAT 34589 ||||||||| || ||||| ||||| || || || || || ||||| || || ||||| Sbjct 13014 GACGATGACCGTTTTGATACCGTTACCTTTACCCTCCACTTTGGCCATGAGACGTGGCAT 12955 Query 34590 TTTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 |||||||||||||| |||| || |||| || ||||| | || ||||| Sbjct 12954 CTTGTAGCGGTAGAAAACGTCGCTGACGCTGCGATTCACGTTTAGCGTACCCAT 12901 >seq9911 Length=12084 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| |||||| | || || || |||||||| | ||| ||| ||| Sbjct 4807 AATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTC 4748 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| ||| | | ||| ||||| ||||||||||| | || ||||| Sbjct 4747 TGATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCA 4688 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | | |||| ||| ||||||||| |||| |||| | || | | ||||| || Sbjct 4687 ACAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAA 4628 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 |||||| |||||||| || | || |||| || ||| | |||| |||| Sbjct 4627 CATTCAGAAAGAATCCACTCTACATTTGGTATTGAGATTAAGAGGAGGAA 4578 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 110269 TAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCC 110328 || |||||| || ||||| || |||||||| || ||||| ||||| | ||| ||| || Sbjct 6214 TAGAATGCAGATCTTTGTGAAGACTTTAACTGGTAAAACAATTACATTGGAAGTGGAACC 6155 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 | || || ||| | |||||| ||||| ||||||||||| | ||| || Sbjct 6154 TTCAGACACCATCGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGA 6095 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 |||||| || | || | ||| || || || |||| |||| | || | | ||||| Sbjct 6094 TCAACAGCGATTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACTCTATCTGATTA 6035 Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||| ||||| ||||| || || | || ||||||||||| || |||| || Sbjct 6034 CAATATTCAGAAAGAGTCCACACTTCATTTGGTGTTAAGATTGAGAGGAGG 5984 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| ||||||||||| || || || ||||| | ||| ||| || | Sbjct 5034 ATGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAACCAGCT 4975 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || ||| |||||| ||||| ||||| | || |||||| Sbjct 4974 GATACCATAGAAAATGTGAAAGCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGATCAA 4915 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | | || | ||| || || || |||| |||| | || | | |||||||| Sbjct 4914 CAACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAAT 4855 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 |||||||| ||||| || | ||| |||| ||| | || |||| |||| Sbjct 4854 ATTCAAAAGGAATCAACTCTTCACCTGGTATTACGGTTGAGAGGAGGAA 4806 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||| || || || ||||||||||| | ||| ||||| | Sbjct 5718 ATGCAAATTTTTGTAAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5659 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | |||||| || ||| ||||| |||||| | || || ||| Sbjct 5658 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5599 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | | || | || || || || |||| |||| | | ||| || | || ||||| Sbjct 5598 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGTACATTGTCTGACTACAAT 5539 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || ||||| |||||||| | || ||||| Sbjct 5538 ATCCAAAAGGAATCTACTCTCCATTTGGTG 5509 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||| || || || ||||||||||| | ||| ||||| | Sbjct 5982 ATGCAAATTTTTGTGAAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCC 5923 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | |||||| || ||| ||||| |||||| | || || ||| Sbjct 5922 GATACAATTGAAAACGTAAAAGCAAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAA 5863 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | | || | || || || || |||| |||| | ||||| || | || || || Sbjct 5862 CAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACATTGTCTGACTATAAT 5803 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || ||||| |||||||| | || ||||| Sbjct 5802 ATCCAAAAGGAATCTACTCTCCATTTGGTG 5773 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| |||||| | || || ||||| ||||| | ||| ||| || Sbjct 4579 AATGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAACCATC 4520 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | || ||| || || ||||||||||| | || || || Sbjct 4519 GGACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACCA 4460 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | | |||| ||| || ||||| ||||||||| | | || | | ||||| || Sbjct 4459 GCAACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCAGATTATAA 4400 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || |||||||||||||| ||||| | || || || || |||| || Sbjct 4399 TATCCAAAAAGAATCTACACTGCACTTAGTCTTGCGATTGAGAGGAGG 4352 >seq22544 Length=59602 Score = 82.4 bits (90), Expect = 6e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 107171 GGACTGCACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTACGTCCGCC 107230 || || ||||| |||||| | |||||||| ||||| | || ||||||||| | || ||| Sbjct 43582 GGCCTTCACGGATTCCACATTCACGAATTCGGCGATAACACCAACGGCTGCATTTCAGCC 43523 Query 107231 GGTGAACACTTCAATCCCACATACCAAA-ATCACGGTGCGCCCGACGCCGTAGAAAGGCA 107289 || | |||||||| ||| || | || ||||||| | || || || | | | | || Sbjct 43522 GGCGCCCACTTCAA-CCCTCACAGTAAGGATCACGGCGGACCAGAAGCAGACGTACGTCA 43464 Query 107290 CGTCGGCGATCTGGGCAACGTC 107311 |||||||||| |||| ||| || Sbjct 43463 CGTCGGCGATTTGGGGAACATC 43442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412708743057665