Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq19917 111 2e-18
seq19472 111 2e-18
>seq19917
Length=26674
Score = 111 bits (122), Expect = 2e-18
Identities = 173/245 (71%), Gaps = 8/245 (3%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||| |||||||| || ||||| ||||||||| | || ||||| ||| | |
Sbjct 2998 TGTACTTGGTCACGGCCTTCGTGCCCTCGCTAACGGCGTGCTTTGCAAGTTCACCGGGAA 2939
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT----TA 1485585
| || || |||||||| ||||||||||| | ||| || || ||| | ||
Sbjct 2938 GCAATAGACGAACGGCGGTTTGGATCTCGCGACTCGTAATC--GTCGCCCTTTTATTATA 2881
Query 1485586 GTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAG 1485645
|| ||| || ||| ||| || | |||| | |||| ||||| || || || |
Sbjct 2880 ATGAGCG--AGACGGGAGGCTTCCGCTGCGATCCTCTCGAAGATGTCATTAACGAAACTG 2823
Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACC 1485705
|||||||| ||||| ||| |||| ||||| ||| ||||| || ||||| ||||||
Sbjct 2822 TTCATGATGCTCATCGCCTTGCTGGATATGCCGGTGTCCGGGTGAACTTGCTTCAGCACC 2763
Query 1485706 TTGTA 1485710
|||||
Sbjct 2762 TTGTA 2758
Score = 111 bits (122), Expect = 2e-18
Identities = 173/245 (71%), Gaps = 8/245 (3%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||| |||||||| || ||||| ||||||||| | || ||||| ||| | |
Sbjct 5453 TGTACTTGGTCACGGCCTTCGTGCCCTCGCTAACGGCGTGCTTTGCAAGTTCACCGGGAA 5394
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT----TA 1485585
| || || |||||||| ||||||||||| | ||| || || ||| | ||
Sbjct 5393 GCAATAGACGAACGGCGGTTTGGATCTCGCGACTCGTAATC--GTCGCCCTTTTATTATA 5336
Query 1485586 GTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAG 1485645
|| ||| || ||| ||| || | |||| | |||| ||||| || || || |
Sbjct 5335 ATGAGCG--AGACGGGAGGCTTCCGCTGCGATCCTCTCGAAGATGTCATTAACGAAACTG 5278
Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACC 1485705
|||||||| ||||| ||| |||| ||||| ||| ||||| || ||||| ||||||
Sbjct 5277 TTCATGATGCTCATCGCCTTGCTGGATATGCCGGTGTCCGGGTGAACTTGCTTCAGCACC 5218
Query 1485706 TTGTA 1485710
|||||
Sbjct 5217 TTGTA 5213
Score = 105 bits (116), Expect = 1e-16
Identities = 173/246 (70%), Gaps = 9/246 (4%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||| |||||||| || ||||| ||||||||| | || ||||| ||| | |
Sbjct 8444 TGTACTTGGTCACGGCCTTCGTGCCCTCGCTAACGGCGTGCTTTGCAAGTTCACCGGGAA 8385
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT----TA 1485585
| || || |||||||| ||||||||||| | ||| || || ||| | ||
Sbjct 8384 GCAATAGACGAACGGCGGTTTGGATCTCGCGACTCGTAATC--GTCGCCCTTTTATTATA 8327
Query 1485586 GTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCG-ATCATGTCGTTGACAAACGA 1485644
|| ||| || ||| ||| || | |||| | ||| | ||||| || || ||
Sbjct 8326 ATGAGCG--AGACGGGAGGCTTCCGCTGCGATCCTCTCGAAGGATGTCATTAACGAAACT 8269
Query 1485645 GTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
||||||||| ||||| ||| |||| ||||| ||| ||||| || ||||| |||||
Sbjct 8268 GTTCATGATGCTCATCGCCTTGCTGGATATGCCGGTGTCCGGGTGAACTTGCTTCAGCAC 8209
Query 1485705 CTTGTA 1485710
||||||
Sbjct 8208 CTTGTA 8203
>seq19472
Length=7445
Score = 111 bits (122), Expect = 2e-18
Identities = 173/245 (71%), Gaps = 8/245 (3%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||| |||||||| || ||||| ||||||||| | || ||||| ||| | |
Sbjct 2216 TGTACTTGGTCACGGCCTTCGTGCCCTCGCTAACGGCGTGCTTTGCAAGTTCACCGGGAA 2157
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT----TA 1485585
| || || |||||||| ||||||||||| | ||| || || ||| | ||
Sbjct 2156 GCAATAGACGAACGGCGGTTTGGATCTCGCGACTCGTAATC--GTCGCCCTTTTATTATA 2099
Query 1485586 GTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAG 1485645
|| ||| || ||| ||| || | |||| | |||| ||||| || || || |
Sbjct 2098 ATGAGCG--AGACGGGAGGCTTCCGCTGCGATCCTCTCGAAGATGTCATTAACGAAACTG 2041
Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACC 1485705
|||||||| ||||| ||| |||| ||||| ||| ||||| || ||||| ||||||
Sbjct 2040 TTCATGATGCTCATCGCCTTGCTGGATATGCCGGTGTCCGGGTGAACTTGCTTCAGCACC 1981
Query 1485706 TTGTA 1485710
|||||
Sbjct 1980 TTGTA 1976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7913437579716795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |