Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq9911 89.7 3e-13 >seq9911 Length=12084 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| | || ||| | ||| | || || || || || ||||| || || Sbjct 4352 CCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGAA 4411 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| |||| ||| || ||||| || |||| |||||||||||| | || Sbjct 4412 AGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGT 4471 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || ||||| | |||||| ||| ||| | | || | || | || || Sbjct 4472 ATACCTTCTTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACT 4531 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || || ||||| || || || ||||||||||| ||||| Sbjct 4532 TCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCAT 4578 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| || | |||| |||| ||| ||| |||||||| || || || ||| Sbjct 5984 CCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGAT 6043 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| |||| |||||| ||||| ||||||| ||| || || ||| | || Sbjct 6044 AGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGGGA 6103 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || || ||||| | || || ||| || || || || | || | || | Sbjct 6104 ATACCTTCTTTGTCCTGGATCTTAGCTTTTAC--ATTCTCGATGGTGTCTGAAGGTTCCA 6161 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || || || || || | ||||| |||||||||||||| Sbjct 6162 CTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCAT 6210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325587988494695