Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq22544 98.7 8e-16
seq22504 87.8 1e-12
seq9911 86.0 5e-12
>seq22544
Length=59602
Score = 98.7 bits (108), Expect = 8e-16
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 105081 GGACTGCACGGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTGCACGTCCGCC 105140
|| || ||||| || ||| ||||||| |||||||||| || ||||||||||| || |||
Sbjct 43582 GGCCTTCACGGATTCCACATTCACGAATTCGGCGATAACACCAACGGCTGCATTTCAGCC 43523
Query 105141 GGCGAGCACTTCAACCCTACGCGCCAAAATCACGGCGCTCCAGACGCCGCAGAAAGGCAC 105200
|||| |||||||||||| | | ||||||||| ||||| || | | | | |||
Sbjct 43522 GGCGCCCACTTCAACCCTCACAGTAAGGATCACGGCGGACCAGAAGCAGACGTACGTCAC 43463
Query 105201 GTCGGCGACCTGGGCAA 105217
|||||||| |||| ||
Sbjct 43462 GTCGGCGATTTGGGGAA 43446
>seq22504
Length=90246
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 107552 TAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGC 107611
|| |||||||||||| || ||||| | ||||| ||||| || ||| |||| || |
Sbjct 25528 TACAATGCAAATTTTCGTGAAAACACTTACAGGGAAAACAATAACCCTCGAGGTTGAACC 25587
Query 107612 TGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGA 107671
| |||||| ||| | ||||| || ||| || || ||||| | || ||
Sbjct 25588 TTCCGATACGATCGAAAATGTAAAGGCTAAAATTCAAGACAAGGAAGGTATCCCACCCGA 25647
Query 107672 TCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTA 107731
|||||| | ||||| | || ||||||||| |||| |||| || | |||| ||
Sbjct 25648 TCAGCAACGTCTTATATTCGCTGGTAAACAGTTGGAAGACGGTCGTACTCTATCGGATTA 25707
Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGG 107781
|| || || ||||| || || |||||| |||||||| | || ||||||
Sbjct 25708 TAATATCCAGAAGGAATCCACTTTGCACTTGGTGTTGCGTTT--GAGGGG 25755
>seq9911
Length=12084
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| |||||| | || || || |||||||| | ||| ||| ||
Sbjct 4807 AATGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTC 4748
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|||||| ||| | | ||| ||||| || |||||||| | || |||||
Sbjct 4747 TGATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCA 4688
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||| | | |||| ||| ||||||||| |||| || | || | | || || ||
Sbjct 4687 ACAGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAA 4628
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|||||| || || || || | || |||| |||||||| |||| ||||
Sbjct 4627 CATTCAGAAAGAATCCACTCTACATTTGGTATTGAGATTAAGAGGAGGAA 4578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398748437083045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |