Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 172 9e-38
seq22504 136 6e-27
>seq9911
Length=12084
Score = 172 bits (190), Expect = 9e-38
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | ||||| ||||| ||||| || || ||| | || || |||| |
Sbjct 5261 TGCAAATTTTTGTTAAAACTTTAACTGGAAAGACCATCACTTTAGAAGTTGAACCATCTG 5202
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| ||||||||||| ||| || || ||||||||| |||||||| |||||||
Sbjct 5201 ATACCATTGAAAATGTAAAAGCTAAGATCCAGGATAAAGAAGGTATTCCACCTGATCAAC 5142
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| |||| || || || |||||||||||||| ||| | | || | |||||||||| |
Sbjct 5141 AACGACTAATATTCGCTGGTAAACAATTAGAAGATGGTCGTACCCTTTCAGATTATAACA 5082
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| ||||| || | ||||||||||||||||| || || ||||
Sbjct 5081 TCCAAAAGGAATCTACCCTTCATTTAGTATTACGATTGAGGGGTGGTA 5034
Score = 163 bits (180), Expect = 4e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| |||||| | || |||||||| || || || |||||| | || || || | |
Sbjct 5489 TGCAGATATTCGTCAAGACATTAACTGGGAAGACGATTACTTTGGAAGTGGAGCCATCTG 5430
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| ||||||||||| ||||| ||| ||||||||| || ||||| || ||||
Sbjct 5429 ATACTATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAAC 5370
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || ||||| ||||||||||| || ||| | || | | |||||||| |
Sbjct 5369 AACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAACA 5310
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| |||||||| ||||| ||||||| ||||||||||| ||||| ||||
Sbjct 5309 TCCAAAAAGAGTCGACCCTCCATTTGGTATTACGATTGAGAGGTGGTA 5262
Score = 145 bits (160), Expect = 1e-29
Identities = 175/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || ||||||| | || |||||||||||||| | || || |||| |
Sbjct 4577 TGCAAATCTTTGTAAAAACTCTTACTGGAAAAACAATTACATTAGAAGTGGAACCATCGG 4518
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| |||| || ||| ||||| ||| |||||||| || || || || || |
Sbjct 4517 ACACCATTGAAAACGTTAAAGCAAAAATCCAAGACAAAGAAGGTATACCTCCAGACCAGC 4458
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | |||||||| || |||||||| || ||| | ||| | ||||||||||||
Sbjct 4457 AACGTTTGATTTTTGCCGGGAAACAATTGGAGGATGGCCGCACGCTTTCAGATTATAATA 4398
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269
| ||||||||||| || | || ||||| || ||||| |||||||||| |||||||
Sbjct 4397 TCCAAAAAGAATCTACACTGCACTTAGTCTTGCGATTGAGAGGAGGTATGCAAATATT 4340
Score = 138 bits (152), Expect = 2e-27
Identities = 166/226 (73%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | ||||| | || ||||| || ||||| | || || |||| | |
Sbjct 4805 TGCAAATTTTTGTGAAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTCTG 4746
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
||||||| | |||| ||| ||| || ||| |||||||| || || || |||||||
Sbjct 4745 ATACTATCGAGAATGCCAAAGCTAAGATCCAAGACAAAGAAGGAATACCTCCAGATCAAC 4686
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | | |||||||| |||||||| || || ||| | | || ||| | |||||||| |
Sbjct 4685 AGCGTTTAATTTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAACA 4626
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || |||||||| ||| | ||||| ||||| |||||||||||||
Sbjct 4625 TTCAGAAAGAATCCACTCTACATTTGGTATTGAGATTAAGAGGAGG 4580
Score = 123 bits (136), Expect = 4e-23
Identities = 163/226 (72%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | ||||| ||||| || || || ||||| |||| || |||| |
Sbjct 5033 TGCAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAACCAGCTG 4974
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || ||||||| ||| || || ||| || ||||| || || ||||||||||
Sbjct 4973 ATACCATAGAAAATGTGAAAGCAAAGATTCAAGACAAGGAAGGAATCCCTCCCGATCAAC 4914
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || ||||| || || ||||| || ||| | | || || ||||||| ||||
Sbjct 4913 AACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAATA 4854
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||| ||||| ||| | || | |||||||| || ||||||||
Sbjct 4853 TTCAAAAGGAATCAACTCTTCACCTGGTATTACGGTTGAGAGGAGG 4808
Score = 123 bits (136), Expect = 4e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | || || ||||| || ||||||||||| | || || |||| | |
Sbjct 6209 TGCAGATCTTTGTGAAGACTTTAACTGGTAAAACAATTACATTGGAAGTGGAACCTTCAG 6150
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || | ||||||||| ||| || || |||||||| ||||| || |||||||
Sbjct 6149 ACACCATCGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCAAC 6090
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || | || ||||| || || ||||| || ||| | | || || | ||||| ||||
Sbjct 6089 AGCGATTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACTCTATCTGATTACAATA 6030
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || ||||| || || | ||||| || ||| |||| ||||||||||
Sbjct 6029 TTCAGAAAGAGTCCACACTTCATTTGGTGTTAAGATTGAGAGGAGGTA 5982
>seq22504
Length=90246
Score = 136 bits (150), Expect = 6e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | |||||| | ||||| |||||||| || | || || |||| | ||
Sbjct 25533 TGCAAATTTTCGTGAAAACACTTACAGGGAAAACAATAACCCTCGAGGTTGAACCTTCCG 25592
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || |||||||||| |||||| ||| || ||||| || ||||||||||| |
Sbjct 25593 ATACGATCGAAAATGTAAAGGCTAAAATTCAAGACAAGGAAGGTATCCCACCCGATCAGC 25652
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | || || || || |||||||| || || || | | || || | ||||||||||
Sbjct 25653 AACGTCTTATATTCGCTGGTAAACAGTTGGAAGACGGTCGTACTCTATCGGATTATAATA 25712
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || || ||||| ||| | || || || || || || || || ||||
Sbjct 25713 TCCAGAAGGAATCCACTTTGCACTTGGTGTTGCGTTTGAGGGGTGGTA 25760
Score = 127 bits (140), Expect = 3e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAAT 146114
||||| |||||||| || | || || |||| | |||||| || |||||||||| |
Sbjct 21011 ACAGGGAAAACAATAACCCTCGAGGTTGAACCTTCCGATACGATCGAAAATGTAAAGGCT 21070
Query 146115 AAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAA 146174
||||| ||| || ||||| || ||||||||||| ||| | || || || || ||||||
Sbjct 21071 AAAATTCAAGACAAGGAAGGTATCCCACCCGATCAGCAACGTCTTATATTCGCTGGTAAA 21130
Query 146175 CAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCAT 146234
|| || || || | | || || | ||||||||||| || |||||||| || | ||
Sbjct 21131 CAGTTGGAAGACGGTCGTACTCTATCGGATTATAATATTCAGAAAGAATCCACCTTACAC 21190
Query 146235 TTAGTATTACGATTAAGAGGAGGTA 146259
|| ||||| || || ||||| ||||
Sbjct 21191 TTGGTATTGCGTTTGAGAGGCGGTA 21215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 785906915952600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |