Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq22639 91.5 2e-13 seq16396 86.0 8e-12 >seq22639 Length=125898 Score = 91.5 bits (100), Expect = 2e-13 Identities = 254/382 (66%), Gaps = 7/382 (2%) Strand=Plus/Minus Query 168594 TGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAGAAAAGAA 168653 ||||| | ||| || ||||||| || ||||||| |||||| | ||| ||| ||||| Sbjct 12896 TGGAAAGCAAATAGTACTCGTGATTTCTTAGATTCTGTTGGTTTAATCGATAGAGAAGAA 12837 Query 168654 GGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGAC 168713 |||||| |||| |||||||| || ||||||||| | ||| || ||| | |||| | Sbjct 12836 GGTGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTATA-CAAA 12778 Query 168714 TGTG-ATACAGATTACACCGGACAAGGAG-TAGACCAATTAAGTCAAACTATAAATACTT 168771 | || || | ||||| | | | | || | |||| || || | || |||||||| Sbjct 12777 TATGCATGCCGATTATA-CTAATAGGGGGATAGATCAGTTGATGGAAGTGATAAATACAA 12719 Query 168772 TACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGATGTACCACAACTTG 168831 || || ||| | ||||| | || | || | ||| || | | | Sbjct 12718 TAAGGAATCGACCGCATGATAGACGCATCATTATGTGTGCATGGAATCCAGTTGATATAC 12659 Query 168832 ATAAAATGGTTCTTCCCCCTTGTCACACTTTAGTGCAATTTTATGTAAGGAAAAAATCAA 168891 |||||||| |||||| ||||| || || || ||||||| ||| ||| || | | Sbjct 12658 CTAAAATGGCTCTTCCACCTTGCCATTGCTTGGTACAATTTTTTGTTGCGAATAA--CGA 12601 Query 168892 TCTTAGATTGTCAGTTGTATCAAAGATCAGCTGATTTAGGATTAGGAGTACCTTATAATA 168951 ||| ||| | || ||||||||||| || ||| | || | |||||||| | ||||| Sbjct 12600 -GTTATCTTGCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTTTAATA 12542 Query 168952 TTGGATTTTATTCATTTTTAAC 168973 ||| | ||| | || ||||| Sbjct 12541 TTGCAAGCTATGCCTTATTAAC 12520 >seq16396 Length=61276 Score = 86.0 bits (94), Expect = 8e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 116510 TaaaaaaaaCGCTGTTATTATGGGTCGGAAAACATGGGATAGTATTCCTAATAAATTTAA 116569 |||||| |||| |||||| |||||| | ||||| |||||||| |||||| |||||||| Sbjct 21080 TAAAAAGAACGTTGTTATCATGGGTAGAAAAACGTGGGATAGCATTCCTCCGAAATTTAA 21139 Query 116570 ACCATTAAAAAATCGAATAAAT 116591 ||||||| |||| |||| ||| Sbjct 21140 ACCATTAGCAAATAGAATTAAT 21161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634967951693400