Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq22639 91.5 2e-13
seq16396 86.0 8e-12
>seq22639
Length=125898
Score = 91.5 bits (100), Expect = 2e-13
Identities = 254/382 (66%), Gaps = 7/382 (2%)
Strand=Plus/Minus
Query 168594 TGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAGAAAAGAA 168653
||||| | ||| || ||||||| || ||||||| |||||| | ||| ||| |||||
Sbjct 12896 TGGAAAGCAAATAGTACTCGTGATTTCTTAGATTCTGTTGGTTTAATCGATAGAGAAGAA 12837
Query 168654 GGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGAC 168713
|||||| |||| |||||||| || ||||||||| | ||| || ||| | |||| |
Sbjct 12836 GGTGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTATA-CAAA 12778
Query 168714 TGTG-ATACAGATTACACCGGACAAGGAG-TAGACCAATTAAGTCAAACTATAAATACTT 168771
| || || | ||||| | | | | || | |||| || || | || ||||||||
Sbjct 12777 TATGCATGCCGATTATA-CTAATAGGGGGATAGATCAGTTGATGGAAGTGATAAATACAA 12719
Query 168772 TACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGATGTACCACAACTTG 168831
|| || ||| | ||||| | || | || | ||| || | | |
Sbjct 12718 TAAGGAATCGACCGCATGATAGACGCATCATTATGTGTGCATGGAATCCAGTTGATATAC 12659
Query 168832 ATAAAATGGTTCTTCCCCCTTGTCACACTTTAGTGCAATTTTATGTAAGGAAAAAATCAA 168891
|||||||| |||||| ||||| || || || ||||||| ||| ||| || | |
Sbjct 12658 CTAAAATGGCTCTTCCACCTTGCCATTGCTTGGTACAATTTTTTGTTGCGAATAA--CGA 12601
Query 168892 TCTTAGATTGTCAGTTGTATCAAAGATCAGCTGATTTAGGATTAGGAGTACCTTATAATA 168951
||| ||| | || ||||||||||| || ||| | || | |||||||| | |||||
Sbjct 12600 -GTTATCTTGCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTTTAATA 12542
Query 168952 TTGGATTTTATTCATTTTTAAC 168973
||| | ||| | || |||||
Sbjct 12541 TTGCAAGCTATGCCTTATTAAC 12520
>seq16396
Length=61276
Score = 86.0 bits (94), Expect = 8e-12
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 116510 TaaaaaaaaCGCTGTTATTATGGGTCGGAAAACATGGGATAGTATTCCTAATAAATTTAA 116569
|||||| |||| |||||| |||||| | ||||| |||||||| |||||| ||||||||
Sbjct 21080 TAAAAAGAACGTTGTTATCATGGGTAGAAAAACGTGGGATAGCATTCCTCCGAAATTTAA 21139
Query 116570 ACCATTAAAAAATCGAATAAAT 116591
||||||| |||| |||| |||
Sbjct 21140 ACCATTAGCAAATAGAATTAAT 21161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634967951693400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |