Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq22639 113 6e-20 >seq22639 Length=125898 Score = 113 bits (124), Expect = 6e-20 Identities = 252/369 (68%), Gaps = 17/369 (5%) Strand=Plus/Minus Query 180494 TGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTCATTT-TCGAAAAGA 180552 ||||| | ||| || | ||| | || ||||||||| ||| ||| || | || |||| Sbjct 12896 TGGAAAGCAAATAGTACTCGTGATTTCTTAGATTCTGTTGG-TTTAATCGATAGAGAAGA 12838 Query 180553 AGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGA 180612 ||||||| ||||||||||||| || ||||||||| | ||| || ||| | |||| | Sbjct 12837 AGGTGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTATACAAA 12778 Query 180613 CTGTG-ATACCAACTATA----TCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAA 180667 | || || || | |||| | ||| | ||||| || || | |||| ||| | Sbjct 12777 -TATGCATGCCGATTATACTAATAGGG----GGATAGATCAGTTGATGGAAGTGATAAAT 12723 Query 180668 ACTATAAAAAATAATCCCGAATGCC-GAAGAATAATCATAGATAGTTGGAATGTATCACA 180726 || |||| ||| || | ||| || | || || || | |||||| | | Sbjct 12722 ACAATAAGGAATCGACC-GCATGATAGACGCATCATTATGTGTGCATGGAATCCAGTTGA 12664 Query 180727 ATTACCAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAATAA 180786 |||| | |||||||||||||| || || || ||||||||||||| |||| ||||| Sbjct 12663 TATACCTAAAATGGCTCTTCCACCTTGCCATTGCTTGGTACAATTTTTTGTTGCGAATAA 12604 Query 180787 AATTTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATA 180846 | ||| ||||| || |||||||||||||| ||| | || | || ||||| | Sbjct 12603 ---CGAGTTATCTTGCCTTTTATATCAAAGATCTGCCGATATGGGTCTTGGAGTACCGTT 12547 Query 180847 TAATATTGC 180855 ||||||||| Sbjct 12546 TAATATTGC 12538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655063716645000