Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq22639 86.0 8e-12 seq16396 86.0 8e-12 >seq22639 Length=125898 Score = 86.0 bits (94), Expect = 8e-12 Identities = 90/116 (78%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 171679 TGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACT-GAAAGAAAAGA 171737 ||||| | ||| || ||||||| || ||||||| || |||||| | || ||| |||| Sbjct 12896 TGGAAAGCAAATAGTACTCGTGATTTCTTAGATTC-TGTTGGTTTAATCGATAGAGAAGA 12838 Query 171738 AGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATA 171793 ||||||| |||| |||||||| || ||||||||| | ||| |||||| | |||| Sbjct 12837 AGGTGATCTAGGACCAATTTACGGCTTTCAATGGCGCCATTATGGGGCTGATTATA 12782 >seq16396 Length=61276 Score = 86.0 bits (94), Expect = 8e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 117001 TaaaaaaaaTGCTGTTATTATGGGTCGAAAAACATGGGATAGTATTCCTAATAAATTTAA 117060 |||||| || | |||||| |||||| ||||||| |||||||| |||||| |||||||| Sbjct 21080 TAAAAAGAACGTTGTTATCATGGGTAGAAAAACGTGGGATAGCATTCCTCCGAAATTTAA 21139 Query 117061 ACCATTAAAAAATCGAATAAAT 117082 ||||||| |||| |||| ||| Sbjct 21140 ACCATTAGCAAATAGAATTAAT 21161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628323745420800