Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq9911 91.5 3e-13 >seq9911 Length=12084 Score = 91.5 bits (100), Expect = 3e-13 Identities = 106/145 (73%), Gaps = 11/145 (8%) Strand=Plus/Plus Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA------- 81696 ||||| ||||||| || ||||| ||||| |||||||| | || ||||| || Sbjct 4835 AGAGTTGATTCCTTTTGAATATTGTAATCTGATAGAGTGCGACCATCTTCCAATTGCTTG 4894 Query 81697 ----CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752 |||| || | | ||||||| | ||| | ||| ||||||| ||||||||||||||| Sbjct 4895 CCAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGAATCTTTGCT 4954 Query 81753 TTTATATTTTCAATCGTATTACCTG 81777 || | |||||| || |||| | ||| Sbjct 4955 TTCACATTTTCTATGGTATCAGCTG 4979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903113017840800