Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq9764 150 2e-31 seq22544 105 6e-18 seq22504 100 3e-16 seq9911 87.8 2e-12 >seq9764 Length=88291 Score = 150 bits (166), Expect = 2e-31 Identities = 332/484 (69%), Gaps = 28/484 (6%) Strand=Plus/Plus Query 148515 TACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTC 148574 |||||||| | | || | |||| ||| || || ||||| | ||| | || || | |||| Sbjct 25022 TACGGTCCTTCCACCTCGGCCAATTCACAACTAGCCTCCAAAGCGGCATAATACAACGTC 25081 Query 148575 TCGGCAATTTGCCTGTTGAGCA-GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCG 148633 ||| ||| ||| ||| | || ||| || |||||| || |||||||| | || | Sbjct 25082 TCGAAAATCTGCAAGTTTAACATGCGA-GCTTCCTCGCTATCATACGGCATTCTCAACAA 25140 Query 148634 CACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGA 148693 | ||| || |||||||||||||||| || | || || || | ||| | || || || Sbjct 25141 AATAAAAGCATCGGCAAGGCCCTGTATTCCGATACCGATCGGTCTATGTCTCATATTCGA 25200 Query 148694 GAGGCGCGC-GCTCTCGAG---CGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTG 148748 || ||| ||| | |||||| | ||| ||| |||||||||| |||| ||| Sbjct 25201 ----CGTTTTGCTTTCGGGTATCGGATAATAGTTAATGTCTATGATCTTGTTCAAG-TTG 25255 Query 148749 CGCACCACCACCTTTGTAA--TTCTGCGCAGCAATTCAAAATCGTACTTGTC---ATC-- 148801 ||| || | || || | |||| | || ||| ||||||||| | | ||| Sbjct 25256 CGCGTGACGATTTTCGTGACGTTCTTCA-AGTT-TTCGAAATCGTACGTCTTCCTATCCG 25313 Query 148802 ----TACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCG 148857 ||||| ||| |||||||| || || |||||||| || || || | || || Sbjct 25314 GTTTTACGAA-CATA--TTCACGGCAATCGACGCTAGATTACAAACTGCAATTTCGTCTT 25370 Query 148858 GGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCT 148917 || | |||||||||||||||| ||| | ||||| | ||||||| |||| ||||| Sbjct 25371 TGGACGTATACTCTACGATCTCGGTGCATAAGTTGCTACTTTTGATCGTTCCCAGGTTCT 25430 Query 148918 TTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCA 148977 ||| ||||| || | ||||| ||||||||||| |||||||| || || ||||||| Sbjct 25431 GTTGGTTGCTTTTACGATTGCAAGCGTCCTTGTAGAGCATGTAAGGGGTACCGGTTTCCA 25490 Query 148978 CCTG 148981 | || Sbjct 25491 CTTG 25494 >seq22544 Length=59602 Score = 105 bits (116), Expect = 6e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 116467 GGCCTGCACGGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCC 116526 ||||| ||||| |||||| | ||||| || ||||| | || ||||||||||| || ||| Sbjct 43582 GGCCTTCACGGATTCCACATTCACGAATTCGGCGATAACACCAACGGCTGCATTTCAGCC 43523 Query 116527 GGCGAACACTTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCAC 116586 |||| ||||||||||| | | |||| ||||||| || | || | ||| |||||| Sbjct 43522 GGCGCCCACTTCAACCCTCACAGTAAGGATCACGGCGGACCAGAAGCAGACGTACGTCAC 43463 Query 116587 GTCGGTGACCTGGGCAACATTGAGGC 116612 ||||| || |||| ||||| || || Sbjct 43462 GTCGGCGATTTGGGGAACATCGAAGC 43437 >seq22504 Length=90246 Score = 100 bits (110), Expect = 3e-16 Identities = 145/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 ||||| || ||||| ||||| ||||| | || | | |||| ||| || | ||| || | Sbjct 25728 GTGGATTCCTTCTGGATATTATAATC--CGATAGAGTACGACCGTCTTCCAACTGTTTAC 25671 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-C 133580 | ||| | || || || ||||| ||||| ||||| ||||||||||| ||| ||| | | Sbjct 25670 CAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTC-TTGAATTTTAGCC 25612 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | ||| |||| || || || |||| ||| | ||||| || || || Sbjct 25611 TTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTCCCTGTAAGT 25552 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| |||||||| ||||| Sbjct 25551 GTTTTCACGAAAATTTGCAT 25532 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/190 (72%), Gaps = 7/190 (4%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || |||| |||||| |||||||| ||||| ||||| | || | | |||| ||| || | Sbjct 21192 AAGTGTAAGGTGGATTCTTTCTGAATATTATAATC--CGATAGAGTACGACCGTCTTCCA 21135 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||| || || ||| | || || || ||||| ||||| ||||| ||||||||||| ||| Sbjct 21134 ACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGGGATACCTTCCTTGTC-TTGA 21076 Query 133573 TCTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| | ||| | | || | ||| |||| || || || |||| ||| | ||||| Sbjct 21075 ATTTTAGCCTTTACATTTTCGATCGTATCGGAAGGTTCAACCTCGAGGGTTATTGTTTTC 21016 Query 133632 CCGGT-CAGA 133640 || || |||| Sbjct 21015 CCTGTGCAGA 21006 >seq9911 Length=12084 Score = 87.8 bits (96), Expect = 2e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || | || || ||||| || ||||||||||||||||| ||| Sbjct 5573 TGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTC-TTGAAT 5631 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||||| || | | |||| || |||| ||||| || || | || | |||||| || Sbjct 5632 TTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCC 5691 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| |||||||| ||||| ||||| Sbjct 5692 AGTCAAGGTTTTTACAAAAATTTGCAT 5718 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || ||||| || ||||| ||||| | |||| | | | ||||| | || || || Sbjct 4382 GTAGATTCTTTTTGGATATTATAATCTGAAAGCGTGCGGCCA-TCCTCCAATTGTTTCCC 4440 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| | || |||||||| ||||| || ||||| ||||| ||| |||||||| Sbjct 4441 GGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACCTTCTTTGTCTTGGAT-TTTTGCTT 4499 Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | || ||||| || | || | ||||| || || |||| Sbjct 4500 TAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGTAATTGTTTTTCCAGTAAGAG 4559 Query 133642 TTTTTACGAAAATCTGCAT 133660 ||||||| || || ||||| Sbjct 4560 TTTTTACAAAGATTTGCAT 4578 Score = 82.4 bits (90), Expect = 7e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || | || || ||||| || ||||||||||||||||| ||| Sbjct 5837 TGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCCTTGTC-TTGAAT 5895 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||||| || | | |||| || |||| ||||| || || | || | |||||| || Sbjct 5896 TTTTGCTTTTACGTTTTCAATTGTATCGGATGGCTCAACTTCCAATGTAATGGTTTTTCC 5955 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||||| || ||||| ||||| Sbjct 5956 AGTCAAGGTTTTCACAAAAATTTGCAT 5982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483261240922200