Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq9562 104 6e-17
seq1292 86.0 1e-11
>seq9562
Length=20090
Score = 104 bits (114), Expect = 6e-17
Identities = 119/159 (75%), Gaps = 6/159 (4%)
Strand=Plus/Minus
Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389
||| | |||||| | ||||| | || || |||||| |||||||| ||| | ||| |||
Sbjct 14840 GTTATTTTCAATCGACAACCGACTCTTCACAAAATGAGTATGATGGGTCACAGAGTTAAA 14781
Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACG---CCTTATAATGCG 305446
|||||| | | | ||||||||| | || ||||| |||||| || || |||||
Sbjct 14780 GTATTACCGTGGTCTACATTTCGAATGAACTTAAGT---TGTACGTCACCATACAATGCT 14724
Query 305447 GATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485
|||||||| || ||||||||||| |||| || ||||||
Sbjct 14723 GATTTTGACGGTGATGAAATGAACTTGCACGTTCCTCAA 14685
Score = 93.3 bits (102), Expect = 1e-13
Identities = 114/154 (74%), Gaps = 4/154 (3%)
Strand=Plus/Minus
Query 304988 AAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCA 305047
||||||||||| || | || |||| ||||| |||||||||||||||||||| |||
Sbjct 16767 AAAGGTAAAGAAGGAAGAATAAGAGGAAATCTTATGGGAAAACGTGTTGATTTCTCAGCA 16708
Query 305048 AGAAGTGTAATCACACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTGAA 305107
| | |||||||| |||||| | | || || || | || |||||||||||| |||
Sbjct 16707 CGTACAGTAATCACTCCTGATCCAAATCTTCGTATTGACCAAGTAGGAGTTCCAA--GAA 16650
Query 305108 --ATTGCTTTAAAACTAACATTTCCAGAGAAAGT 305139
||||| ||| ||||||| ||||| | |||
Sbjct 16649 GCATTGCGCAAAATTTAACATTCCCAGAAATAGT 16616
>seq1292
Length=12250
Score = 86.0 bits (94), Expect = 1e-11
Identities = 90/116 (78%), Gaps = 2/116 (2%)
Strand=Plus/Plus
Query 167239 TCATTACACCACCAGCATTATCGAATTCATTCGC-ATAATTTGGTGCTGAAAATACAGTA 167297
|||| | || |||||||||||||||||| ||| ||| || ||||| ||||| | ||
Sbjct 3549 TCATCATGCCGCCAGCATTATCGAATTCA-CCGCAATAGTTGGGTGCCGAAAACAAGGTG 3607
Query 167298 ACTAATTTACGATTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACG 167353
|| | | ||| || || |||||||||||||||||||| |||| |||||||||
Sbjct 3608 ACAAGCTGACGTTTAGCGAAAAATTCATAACCATCTTCAACTACTTGATGGGCACG 3663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186411284540205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |