Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq9562 104 6e-17 seq1292 86.0 1e-11 >seq9562 Length=20090 Score = 104 bits (114), Expect = 6e-17 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||| | |||||| | ||||| | || || |||||| |||||||| ||| | ||| ||| Sbjct 14840 GTTATTTTCAATCGACAACCGACTCTTCACAAAATGAGTATGATGGGTCACAGAGTTAAA 14781 Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACG---CCTTATAATGCG 305446 |||||| | | | ||||||||| | || ||||| |||||| || || ||||| Sbjct 14780 GTATTACCGTGGTCTACATTTCGAATGAACTTAAGT---TGTACGTCACCATACAATGCT 14724 Query 305447 GATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 |||||||| || ||||||||||| |||| || |||||| Sbjct 14723 GATTTTGACGGTGATGAAATGAACTTGCACGTTCCTCAA 14685 Score = 93.3 bits (102), Expect = 1e-13 Identities = 114/154 (74%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 304988 AAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCA 305047 ||||||||||| || | || |||| ||||| |||||||||||||||||||| ||| Sbjct 16767 AAAGGTAAAGAAGGAAGAATAAGAGGAAATCTTATGGGAAAACGTGTTGATTTCTCAGCA 16708 Query 305048 AGAAGTGTAATCACACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTGAA 305107 | | |||||||| |||||| | | || || || | || |||||||||||| ||| Sbjct 16707 CGTACAGTAATCACTCCTGATCCAAATCTTCGTATTGACCAAGTAGGAGTTCCAA--GAA 16650 Query 305108 --ATTGCTTTAAAACTAACATTTCCAGAGAAAGT 305139 ||||| ||| ||||||| ||||| | ||| Sbjct 16649 GCATTGCGCAAAATTTAACATTCCCAGAAATAGT 16616 >seq1292 Length=12250 Score = 86.0 bits (94), Expect = 1e-11 Identities = 90/116 (78%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 167239 TCATTACACCACCAGCATTATCGAATTCATTCGC-ATAATTTGGTGCTGAAAATACAGTA 167297 |||| | || |||||||||||||||||| ||| ||| || ||||| ||||| | || Sbjct 3549 TCATCATGCCGCCAGCATTATCGAATTCA-CCGCAATAGTTGGGTGCCGAAAACAAGGTG 3607 Query 167298 ACTAATTTACGATTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACG 167353 || | | ||| || || |||||||||||||||||||| |||| ||||||||| Sbjct 3608 ACAAGCTGACGTTTAGCGAAAAATTCATAACCATCTTCAACTACTTGATGGGCACG 3663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186411284540205