Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 158 8e-34
seq22504 93.3 3e-14
>seq9911
Length=12084
Score = 158 bits (174), Expect = 8e-34
Identities = 174/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| |||||||| | |||||||||||| || ||| |||||| || || |||||||| ||
Sbjct 5983 ACCTCCTCTCAATCTTAACACCAAATGAAGTGTGGACTCTTTCTGAATATTGTAATCAGA 6042
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || |||||||| || |||||||| ||||| ||||| |||||| | ||
Sbjct 6043 TAGAGTGCGACCATCTTCCAATTGCTTGCCGGCAAAGATCAATCGCTGTTGATCTGGGGG 6102
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||||||| || || | || |||| || | |||||| | |||||
Sbjct 6103 AATACCTTCTTTGTCCTGGATCTT-AGCTTTTACATTCTCGATGGTGTCTGAAGGTTCCA 6161
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || || |||||||| ||||| || || ||||||||||||||
Sbjct 6162 CTTCCAATGTAATTGTTTTACCAGTTAAAGTCTTCACAAAGATCTGCAT 6210
Score = 149 bits (164), Expect = 4e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| |||||||| || || || || || || || |||||||| || || ||||| ||
Sbjct 4351 ACCTCCTCTCAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGA 4410
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || ||||||||||| ||||||||||||||||| ||||| ||| | ||
Sbjct 4411 AAGCGTGCGGCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGG 4470
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||||||| ||||| || || ||| | || | |||||| || |||||
Sbjct 4471 TATACCTTCTTTGTCTTGGATTTT-TGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCA 4529
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || || ||||| || || | |||||||||||||| |||||
Sbjct 4530 CTTCTAATGTAATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCAT 4578
Score = 147 bits (162), Expect = 1e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| ||||| |||||||| || || ||||||||| ||||| ||||| ||
Sbjct 5263 ACCACCTCTCAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCAGA 5322
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || ||| | || ||||||||||| || ||||| |||||||| || || ||| | ||
Sbjct 5323 AAGAGTACGTCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGG 5382
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||| || |||||| || || |||| || | || || || ||||
Sbjct 5383 GATACCTTCTTTATCTTGAATTTT-TGCTTTTACATTTTCAATAGTATCAGATGGCTCCA 5441
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || ||||| || || ||||| || || || || |||||||||
Sbjct 5442 CTTCCAAAGTAATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCATA 5491
Score = 116 bits (128), Expect = 2e-21
Identities = 154/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
||||||||||| || || ||||| || |||||||| || || || || | || |||
Sbjct 4142 ACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGTTCGCCCATCTTCC 4201
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
||||||||||| ||||| |||||||||||||||||| | || | ||||||||| || |
Sbjct 4202 AATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTATCCTGA 4261
Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719
||||| | || ||| | || | || || | ||| || || | ||||| |||||
Sbjct 4262 ATTTT-AGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAATGTGATAGTTTT 4320
Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || | || || ||||| || ||||||
Sbjct 4321 CCCAGTAAGGGTCTTAACAAATATTTGCATA 4351
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| ||||| | ||||||||| ||||| || ||||| || ||||| || ||
Sbjct 5491 ACCACCTCTTAAACGAAGCACCAAATGGAGAGTAGATTCCTTTTGGATATTGTAGTCAGA 5550
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||| || | || |||||||| || || || || || ||||| || || ||| | ||
Sbjct 5551 CAATGTACGGCCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGGTCTGGTGG 5610
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700
| ||||| ||||| |||||| || || || | ||| || ||| || || |
Sbjct 5611 GATGCCTTCCTTGTCTTGAATTTT-TGCTTTTACGTTTTCAATTGTATCGGATGGCTCAA 5669
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || ||||| || || || ||||||||||| || ||||||
Sbjct 5670 CTTCCAATGTAATGGTTTTTCCAGTCAAGGTTTTTACAAAAATTTGCATA 5719
Score = 102 bits (112), Expect = 5e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| ||||| || | || ||||||||||||||| ||||| || ||||| ||||| ||
Sbjct 4580 CCTCCTCTTAATCTCAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGAT 4639
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| || || | || ||||| ||||| || |||||||| |||||||| |||||| | ||
Sbjct 4640 AAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGT 4699
Query 33643 ACACCTTCTTTGTC 33656
| |||||||||||
Sbjct 4700 ATTCCTTCTTTGTC 4713
>seq22504
Length=90246
Score = 93.3 bits (102), Expect = 3e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| ||||||||||| || ||||| |||| ||| ||||| || || || ||||| ||
Sbjct 21214 ACCGCCTCTCAAACGCAATACCAAGTGTAAGGTGGATTCTTTCTGAATATTATAATCCGA 21155
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || |||| ||||| ||||| || || || || | ||| |||||||| | ||
Sbjct 21154 TAGAGTACGACCGTCTTCCAACTGTTTACCAGCGAATATAAGACGTTGCTGATCGGGTGG 21095
Query 33642 CACACCTTCTTTGTCGGCAATTTT 33665
| |||||| ||||| ||||||
Sbjct 21094 GATACCTTCCTTGTCTTGAATTTT 21071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328598219457600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |