Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq9911 107 5e-18
seq22504 87.8 4e-12
>seq9911
Length=12084
Score = 107 bits (118), Expect = 5e-18
Identities = 146/201 (73%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|||||||| ||| || | || || || ||||| |||||||||||||| |||||
Sbjct 5487 CAGATATTCGTCAAGACATTAACTGGGAAGACGATTACTTTGGAAGTGGAGCCATCTGAT 5428
Query 206233 ACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| ||||| |||||| |||||||| |||||||| || || ||| ||
Sbjct 5427 ACTATTGAAAATGTAAAAGCAAAA-ATTCAAGATAAAGAAGGTATCCCACCAGACCAACA 5369
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | | ||||| || || || || |||||||||||| | ||| | | ||||| ||| |
Sbjct 5368 ACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAACAT 5309
Query 206352 CCAGAAAGAGTCTACTCTTCA 206372
||| |||||||| || || ||
Sbjct 5308 CCAAAAAGAGTCGACCCTCCA 5288
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || ||||| || || |||||||||||| ||| |||
Sbjct 6207 CAGATCTTTGTGAAGACTTTAACTGGTAAAACAATTACATTGGAAGTGGAACCTTCAGAC 6148
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| ||||| ||||| || || |||||||| ||| || || ||
Sbjct 6147 ACCATCGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCAACAG 6088
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| ||||| ||||| ||||||||||| | ||| | | |||||||| |
Sbjct 6087 CGATTGATCTTTGCCGGCAAGCAATTGGAAGATGGTCGCACTCTATCTGATTACAATATT 6028
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||||||||| || ||||| | || || |||
Sbjct 6027 CAGAAAGAGTCCACACTTCATTTGGTGTTAAGA 5995
Score = 102 bits (112), Expect = 2e-16
Identities = 149/205 (73%), Gaps = 8/205 (4%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || ||||| || || || |||||||||||| |||||| || ||||
Sbjct 4791 AAAACTCTTACGGGAAAGACCATTACATTGGAAGTGGAACCTTCTGATACTATCGAGAAT 4732
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--AT 206300
| ||||| || ||| ||||| ||||||||||| || || |||| || || ||
Sbjct 4731 GCCAAAGCTAA-GATCCAAGACAAAGAAGGAATACCTCCAGA---TCAACAGCGTTTAAT 4676
Query 206301 CTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGA 206360
|| || || || |||||||||||||| | ||||| | ||||| ||| | ||||||||
Sbjct 4675 TTTTGCTGGTAAACAGTTGGAAGATGGTCGTACTTTATCTGATTATAACATTCAGAAAGA 4616
Query 206361 GTCTACTCTTCACCTTGTTTTGAGA 206385
|| ||||| || | || ||||||
Sbjct 4615 ATCCACTCTACATTTGGTATTGAGA 4591
Score = 100 bits (110), Expect = 7e-16
Identities = 137/189 (72%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || |||||||| || || |||||||| || || || ||| | |||
Sbjct 5703 AAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCCGATACAATTGAAAAC 5644
Query 206245 GTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
||||| |||||| |||||||| || ||||| || || ||| ||| | | |||||
Sbjct 5643 GTAAAAGCAAAA-ATTCAAGACAAGGAAGGCATCCCACCAGACCAACAACGTTTAATCTT 5585
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||| ||||||||||| | || ||| | || ||||| |||| || || ||
Sbjct 5584 CGCTGGCAAGCAATTGGAAGATGGCCGTACATTGTCTGACTACAATATCCAAAAGGAATC 5525
Query 206364 TACTCTTCA 206372
|||||| ||
Sbjct 5524 TACTCTCCA 5516
Score = 95.1 bits (104), Expect = 3e-14
Identities = 136/189 (72%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || |||||||| || || |||||||| || || || ||| | |||
Sbjct 5967 AAAACCTTGACTGGAAAAACCATTACATTGGAAGTTGAGCCATCCGATACAATTGAAAAC 5908
Query 206245 GTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
||||| |||||| |||||||| || ||||| || || ||| ||| | | |||||
Sbjct 5907 GTAAAAGCAAAA-ATTCAAGACAAGGAAGGCATCCCACCAGACCAACAACGTTTAATCTT 5849
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||| ||||||||||| | || ||| | || || || |||| || || ||
Sbjct 5848 CGCTGGCAAGCAATTGGAAGATGGCCGAACATTGTCTGACTATAATATCCAAAAGGAATC 5789
Query 206364 TACTCTTCA 206372
|||||| ||
Sbjct 5788 TACTCTCCA 5780
Score = 89.7 bits (98), Expect = 1e-12
Identities = 142/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| |||||| || || || || || ||||| ||||| |||||||| ||| ||| ||
Sbjct 4347 CAAATATTTGTTAAGACCCTTACTGGGAAAACTATCACATTGGAAGTAGAACCTTCAGAT 4288
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
||| | ||| || ||||| ||| ||||| || |||||||| ||| || || ||
Sbjct 4287 ACAATTGAAAACGTTAAAGCTAAA-ATTCAGGATAAAGAAGGTATTCCTCCAGATCAGCA 4229
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | ||||| || ||||| || ||||||||||| | ||| | | |||||||| |
Sbjct 4228 GCGTTTGATCTTTGCAGGAAAACAATTGGAAGATGGGCGAACTCTTTCAGATTACAATAT 4169
Query 206352 CCAGAAAGAGTCTACTCTTCA 206372
|| || || ||||| || ||
Sbjct 4168 TCAAAAGGAATCTACCCTACA 4148
Score = 84.2 bits (92), Expect = 5e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| | || || || || || || | ||||||||| ||||
Sbjct 5031 CAGATTTTTGTTAAAACTTTAACTGGTAAGACTATTACACTTGAAGTGGAACCAGCTGAT 4972
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| || |||||||| ||||||||| || |||||||| || || ||
Sbjct 4971 ACCATAGAAAATGTGAAAGCAAA-GATTCAAGACAAGGAAGGAATCCCTCCCGATCAACA 4913
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | | || || || || ||||| ||||||||||| | ||| | | |||||||| |
Sbjct 4912 ACGTTTGATATTTGCTGGCAAGCAATTGGAAGATGGTCGCACTCTATCAGATTACAATAT 4853
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTT 206381
|| || || || ||||||||||| || ||
Sbjct 4852 TCAAAAGGAATCAACTCTTCACCTGGTATT 4823
>seq22504
Length=90246
Score = 87.8 bits (96), Expect = 4e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || ||||| ||||| || || | || || ||| ||| || || |||||
Sbjct 25547 AAAACACTTACAGGGAAAACAATAACCCTCGAGGTTGAACCTTCCGATACGATCGAAAAT 25606
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| || |||||||| || ||||| || || || ||| | ||||| |||
Sbjct 25607 GTAAAGGCTAAAATTCAAGACAAGGAAGGTATCCCACCCGATCAGCAACGTCTTATATTC 25666
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || || ||||||||||| || | ||| | | ||||| || ||||||| || ||
Sbjct 25667 GCTGGTAAACAGTTGGAAGACGGTCGTACTCTATCGGATTATAATATCCAGAAGGAATCC 25726
Query 206365 ACTCTTCACCTTGTTTTG 206382
||| | ||| | || |||
Sbjct 25727 ACTTTGCACTTGGTGTTG 25744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181420973404005
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |