Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13] 26,405 sequences; 423,765,647 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq9764 150 2e-31 seq9911 125 7e-24 seq22544 120 3e-22 >seq9764 Length=88291 Score = 150 bits (166), Expect = 2e-31 Identities = 406/614 (66%), Gaps = 24/614 (4%) Strand=Plus/Plus Query 147166 GCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTT 147225 ||||||||||| || ||||| | || |||| || | || ||| || || |||| Sbjct 25040 GCCAATTCACAACTAGCCTCCAAAGCGGCATAATACAACGTCTCGAAAATCTGCAAGTTT 25099 Query 147226 AGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAA 147285 | | | ||||| ||||| || || ||||| | || | | ||| |||||||| | Sbjct 25100 AACATGCGAGCTTCCTCGCTATCATACGGCATTCTCAACAAAATAAAAGCATCGGCAAGG 25159 Query 147286 CCCTGGATACCGACGCCGATAGGTCGATGCTTTTCGT-TGCTGCGCTTCGCGCTC-GCTA 147343 ||||| || |||| ||||| |||| ||| | || | | | || || || || | || Sbjct 25160 CCCTGTATTCCGATACCGATCGGTCTATG--TCTCATATTCGACGTTTTGCTTTCGGGTA 25217 Query 147344 TGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTG 147403 | ||||| | ||| || || |||||||| | ||| ||| || | ||| || | Sbjct 25218 TCGGATAATAGTTAATGTCTATGATCTTGTTCAAGTTGCGCGTGACGATTTTCGTGACGT 25277 Query 147404 TTTTGAGTTTCTCGAAATCATAAGTCCCGTCTT-CGACACG----TACGCATTGGTTCAC 147458 | || | || |||||||| || |||||| | | || |||| | ||||| Sbjct 25278 TCTTCAAGTTTTCGAAATCGTA-----CGTCTTCCTATCCGGTTTTACGAACATATTCAC 25332 Query 147459 GGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTC 147518 ||| || ||||| ||||| || || || | || || | | |||| ||||| || Sbjct 25333 GGCAATCGACGCTAGATTACAAACTGCAATTTCGTCTTTGGACGTATACTCTACGATCTC 25392 Query 147519 GGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCA 147578 || ||| | |||||| | ||| || ||||| || || || |||||||| |||||||| Sbjct 25393 GGTGCATAAGTTGCTACTTTTGATCGTTCCCAGGTTCTGTTGGTTGCTTTTACGATTGCA 25452 Query 147579 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCT 147638 ||||| ||| |||||||||| || ||||| || ||||| | ||| ||| | Sbjct 25453 AGCGTCCTTGTAGAGCATGTAAGGGGTACCGGTTTCCACTTGGGCGGCAATGATGGCGCG 25512 Query 147639 ATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTT-----TTCGTACCGC 147693 || | ||| ||| | | | | ||| || || || |||||| | Sbjct 25513 CCATAGTTGCTGAGCTGGAATTTG--GGCGA---CGTATTTCTTTCCTGATTCGTATTTC 25567 Query 147694 TCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGA 147753 ||||| | ||| || || ||||| ||||||||| ||| || ||||| ||||||||| Sbjct 25568 TCGTATAGGTTCTCGAATTCTTCGCCCCAGCAATCGGAAAGTCCCGGACATTGATGCGGA 25627 Query 147754 CACATCAGCGACCA 147767 |||||||| ||||| Sbjct 25628 CACATCAGGGACCA 25641 >seq9911 Length=12084 Score = 125 bits (138), Expect = 7e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| || || |||||||| | | | ||||||||||| ||||| || || | ||||| Sbjct 5272 CAATCGTAATACCAAATGGAGGGTCGACTCTTTTTGGATGTTATAATCAGAAAGAGTACG 5331 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| | |||||||| | | |||| | ||| ||||| ||||| || || ||||| Sbjct 5332 TCCATCTTCCAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGGATACCTTC 5391 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 |||||| ||||||| ||| | | ||| | |||||| | ||||||||||| | || Sbjct 5392 TTTATCTTGAATTTTTGCTTTTACATTTTCAATAGTATCAGATGGCTCCACTTCCAAAGT 5451 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||| || ||||| | || || | ||| |||||||| Sbjct 5452 AATCGTCTTCCCAGTTAATGTCTTGACGAATATCTGCAT 5490 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| |||||||||| | || ||||| |||||||| || || | ||||| ||| Sbjct 4594 CAATACCAAATGTAGAGTGGATTCTTTCTGAATGTTATAATCAGATAAAGTACGACCATC 4653 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| | ||||||||| | | | |||| ||||||||||||||||||||| |||||||| || Sbjct 4654 TTCCAACTGTTTACCAGCAAAAATTAAACGCTGTTGATCTGGAGGTATTCCTTCTTTGTC 4713 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 || || ||| | || | |||||| | || |||||||| | || | || Sbjct 4714 TTGGATCTTAGCTTTGGCATTCTCGATAGTATCAGAAGGTTCCACTTCCAATGTAATGGT 4773 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||||||| | ||||| ||||| Sbjct 4774 CTTTCCCGTAAGAGTTTTCACAAAAATTTGCAT 4806 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| ||||| | |||||||||| | | || || |||||||| ||||| || | || Sbjct 4129 ACGTAAGCGAAGTACCAAATGTAGGGTAGATTCCTTTTGAATATTGTAATCTGAAAGAGT 4188 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| |||||| | ||||| || | | |||| | |||||| ||||||||||| || || Sbjct 4189 TCGCCCATCTTCCAATTGTTTTCCTGCAAAGATCAAACGCTGCTGATCTGGAGGAATACC 4248 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||||||||| |||||| ||| | | ||| | ||||| | || || ||||| | Sbjct 4249 TTCTTTATCCTGAATTTTAGCTTTAACGTTTTCAATTGTATCTGAAGGTTCTACTTCCAA 4308 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| ||||| || || || | || || ||||| Sbjct 4309 TGTGATAGTTTTCCCAGTAAGGGTCTTAACAAATATTTGCAT 4350 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| || || |||| || | |||| || |||||||| ||||| || | || | | Sbjct 4816 CAACCGTAATACCAGGTGAAGAGTTGATTCCTTTTGAATATTGTAATC--TGATAGAGTG 4873 Query 131965 CGA--ATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 ||| |||||| | || || || | | | || | ||| |||||||| ||||| || ||| Sbjct 4874 CGACCATCTTCCAATTGCTTGCCAGCAAATATCAAACGTTGTTGATCGGGAGGGATTCCT 4933 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || ||| ||| ||||| | ||| | ||||| | || |||||||| | Sbjct 4934 TCCTTGTCTTGAATCTTTGCTTTCACATTTTCTATGGTATCAGCTGGTTCCACTTCAAGT 4993 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || |||||||| | |||||| | ||||||||||| Sbjct 4994 GTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATCTGCAT 5034 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| ||||| || || || | | || |||||||| || || || || | || || Sbjct 4360 CAATCGCAAGACTAAGTGCAGTGTAGATTCTTTTTGGATATTATAATCTGAAAGCGTGCG 4419 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 ||| || | ||||| |||| | | || | ||| || || ||||||||||| ||||| Sbjct 4420 GCCATCCTCCAATTGTTTCCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGTATACCTTC 4479 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||| || |||||| ||| | | ||| | || || | || |||||||| | || Sbjct 4480 TTTGTCTTGGATTTTTGCTTTAACGTTTTCAATGGTGTCCGATGGTTCCACTTCTAATGT 4539 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||||| ||||| |||||||||| || || ||||| Sbjct 4540 AATTGTTTTTCCAGTAAGAGTTTTTACAAAGATTTGCAT 4578 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| || || || ||||| | | | || || ||||| ||||| || || | |||||| Sbjct 5044 CAATCGTAATACTAAATGAAGGGTAGATTCCTTTTGGATGTTATAATCTGAAAGGGTACG 5103 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| | |||||||| | | ||||| || |||||||| || || || ||||| Sbjct 5104 ACCATCTTCTAATTGTTTACCAGCGAATATTAGTCGTTGTTGATCAGGTGGAATACCTTC 5163 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 |||||| || || ||| | | ||| | ||||| | || || ||||| | || Sbjct 5164 TTTATCCTGGATCTTAGCTTTTACATTTTCAATGGTATCAGATGGTTCAACTTCTAAAGT 5223 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || ||||| | |||||| | ||||| ||||| Sbjct 5224 GATGGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 5262 >seq22544 Length=59602 Score = 120 bits (132), Expect = 3e-22 Identities = 187/264 (71%), Gaps = 5/264 (2%) Strand=Plus/Plus Query 51615 CCGAGATCGTCGCGCTTTGCGTGAACCACCAGACTGCGGCCAACGACGCTATTTTCGCCG 51674 |||||||| ||| | | ||||||||| ||||| | || ||||||| ||| | | || Sbjct 43323 CCGAGATCATCGGGGTCTGCGTGAACGACCAGGGTACGTCCAACGATGCTGTGCGCTCCT 43382 Query 51675 AAAAGCGTCATCACGTTGTCGATCTTGTCCACTTCGGTGAGGGCGTTGGACACTTTAGCC 51734 |||| |||||||| ||| | | || | || || | | | | || || Sbjct 43383 TCCAGCGATATCACGTTATCGCAAATTTTAACCTTGGCGATGCCATCGT---CTCCCGCT 43439 Query 51735 TCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAGCGCCGTGGTCGCTG 51794 |||| || ||||| ||||||||||| || | | || | || ||||||| || || Sbjct 43440 TCGATGTTCCCCAAATCGCCGACGTGACGTACGTCTGCTTCTGGTCCGCCGTGATC-CTT 43498 Query 51795 CCGGTG-GGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAATTC 51853 | ||| ||||||||||| |||| || || ||||||||||| || | ||||||||||| Sbjct 43499 ACTGTGAGGGTTGAAGTGGGCGCCGGCTGAAATGCAGCCGTTGGTGTTATCGCCGAATTC 43558 Query 51854 GTGCACGTGGAATCCGTGCAGGCC 51877 ||| | |||||||||||| ||||| Sbjct 43559 GTGAATGTGGAATCCGTGAAGGCC 43582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476453888515800