Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryctes_20borbonicus_20[genbank_20GCA_5F001443705.1_202015-11-13]
26,405 sequences; 423,765,647 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq6455 105 2e-19
seq10078 104 7e-19
seq25089 102 3e-18
seq16149 98.7 3e-17
seq14322 98.7 3e-17
seq13304 98.7 3e-17
seq1167 98.7 3e-17
>seq6455
Length=22828
Score = 105 bits (116), Expect = 2e-19
Identities = 70/78 (90%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822
||||| || ||| |||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 15778 TTTATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGT 15719
Query 2823 TCAACCCCGGGCTTCAGC 2840
|||| |||||| ||| ||
Sbjct 15718 TCAATCCCGGGTTTCGGC 15701
Score = 105 bits (116), Expect = 2e-19
Identities = 70/78 (90%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822
||||| || ||| |||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 16040 TTTATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGT 15981
Query 2823 TCAACCCCGGGCTTCAGC 2840
|||| |||||| ||| ||
Sbjct 15980 TCAATCCCGGGTTTCGGC 15963
>seq10078
Length=42974
Score = 104 bits (114), Expect = 7e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 8438 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 8497
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 8498 CCGGGTTTCGGC 8509
Score = 104 bits (114), Expect = 7e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 9285 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 9344
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 9345 CCGGGTTTCGGC 9356
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 4289 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 4348
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 4349 CCGGGTTTCGGC 4360
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 5784 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 5843
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 5844 CCGGGTTTCGGC 5855
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 11169 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 11228
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 11229 CCGGGTTTCGGC 11240
>seq25089
Length=21419
Score = 102 bits (112), Expect = 3e-18
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824
||| || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 6412 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTC 6353
Query 2825 AACCCCGGGCTTCAGC 2840
|| |||||| ||| ||
Sbjct 6352 AATCCCGGGTTTCGGC 6337
>seq16149
Length=37491
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 36679 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 36620
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 36619 CCGGGTTTCGGC 36608
>seq14322
Length=60725
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 12308 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 12367
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 12368 CCGGGTTTCGGC 12379
>seq13304
Length=1465
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 110 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 51
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 50 CCGGGTTTCGGC 39
>seq1167
Length=46438
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 9665 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 9606
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 9605 CCGGGTTTCGGC 9594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15845022561225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |